From 64cdb36292a167e76220521d7bef976e462f803c Mon Sep 17 00:00:00 2001 From: Antonio De Lucreziis Date: Fri, 24 May 2024 01:40:30 +0200 Subject: [PATCH] updated readme --- README.md | 10 ++++++++++ 1 file changed, 10 insertions(+) diff --git a/README.md b/README.md index b44f281..c4f3a9e 100644 --- a/README.md +++ b/README.md @@ -10,6 +10,12 @@ Parses the GFA file and prints the graph and various information. +- Visualize the graph using EGUI, go to `examples/configurable` and run: + + `cargo run -- ../../dataset/example.gfa` + + `cargo run -- ../../dataset/DRB1-3123_unsorted.gfa` + ## Example GFA ``` @@ -52,7 +58,11 @@ W sample 2 B 0 4 >21>22>24>25 - Documentazione del formato GFA: http://gfa-spec.github.io/GFA-spec/GFA1.html - Data set: + - [example.gfa](https://github.com/jltsiren/gbwt-rs/blob/main/test-data/example.gfa) + - [drb1.gfa](https://github.com/pangenome/odgi/blob/master/test/DRB1-3123_unsorted.gfa) + - [chrY.gfa](https://s3-us-west-2.amazonaws.com/human-pangenomics/pangenomes/freeze/freeze1/pggb/chroms/chrY.hprc-v1.0-pggb.gfa.gz) + - [chrX.gfa](https://s3-us-west-2.amazonaws.com/human-pangenomics/pangenomes/freeze/freeze1/pggb/chroms/chrX.hprc-v1.0-pggb.gfa.gz)