From ab453d36daa197e97e4b3f766f9394bde8a702a6 Mon Sep 17 00:00:00 2001 From: Salvatore Filippone Date: Thu, 4 Oct 2012 15:08:16 +0000 Subject: [PATCH] mld2p4-2: Start update of documentation. --- docs/html/img68.png | Bin 8739 -> 8736 bytes docs/html/index.html | 2 +- docs/html/node11.html | 14 +- docs/html/node12.html | 10 +- docs/html/node13.html | 8 +- docs/html/node14.html | 2 +- docs/html/node15.html | 8 +- docs/html/node18.html | 8 +- docs/html/node24.html | 66 +- docs/html/node25.html | 34 +- docs/html/node26.html | 2 +- docs/html/node3.html | 46 +- docs/html/node6.html | 8 +- docs/html/node7.html | 2 +- docs/html/userhtml.html | 2 +- ...2p4-1.1-guide.pdf => mld2p4-2.0-guide.pdf} | 2282 +++++++++-------- docs/src/bibliography.tex | 11 +- docs/src/license.tex | 67 +- docs/src/overview.tex | 36 +- docs/src/userguide.tex | 2 +- docs/src/userhtml.tex | 2 +- 21 files changed, 1342 insertions(+), 1270 deletions(-) rename docs/{mld2p4-1.1-guide.pdf => mld2p4-2.0-guide.pdf} (81%) diff --git a/docs/html/img68.png b/docs/html/img68.png index b14d197f610a78f58bc43534e7c4a25265a2c920..55d516c1428b6c6b43caada669b785eae39d94dc 100644 GIT binary patch delta 5132 zcmV+n6!Yt&M4&{l3krYqfiOEzj?&o4{wXr}rFDs=DhTqXhD$w5+IivfkQBGckYfFBvW&GSiM<0bI1A zmdlIiH8u(6l7Bt68X3T|IC#Yb(;*fE&4fxO2(qW87nL&r-{3LIxrZvrF&1KnT zJTv~hzhsRFs%O2yAL@|IH!`nv(6$x{JB>qbu{NuYV7p}0V>!RtS+rrl+sED|%Y#rQ z+jnIjqcd}7a0P#xRMf2_hPn&Q&_50HX;`6>Q7Kp1etLW4n)od<^Z?loB)0Q`RIITG z9mrHZ=ZkwUr%jc$ltS^EjCE+-N)zFUO}K&mN7CD%%#y$SE)e2yeH{snOC}gsb)uC~V7(v18^+PA!of#u7Y*& z+N~GGpS5+ltr_@Q&h>!?YG23_MAXb8@I@97TZHtuva9Cgwnj#TlDU2DWPFh{wWG>Z zQ4=C0o;vB0J@pjjq0*WxsBN;C&NgpaQTZKjdRqDnqbS;85-pi`ua&G5{IoIas_K9H zH6y>lAL@|IH?opv%HpwAPGSicD{cmTkWm2V{Du}VYv*4>#gn8jG8KF7(aKU3iqxb< z10?fVn?d3YnF{(Mm=&s7?qSU+_i4lW+QsrcUAiH1$ufMH;MdsRM|Eozwyxm^G61aM z0edyKxuV7`GF+aGf&D5axgN=w6cvA#YZZNlndli0SOdw)gn1^JkY`t#0{X`}l&x4~ zmIIvUAcggCtwq&{0RSyY2A@ z_p?cs5wcV)`KKAwOb%_UmF*KqykbsOp-lMVMsT6>+|Cn91=*KXX9TQrV^`51!8UrRKisqMkcb-qHPNB5JusU z6hXrkbb2c6t0Tk9R5ht?nOeh{XwEN6k|t z&h1qQ_P6pS5U792homqMvzSh$2%*qe8%^hm27@}X$a1#^DE)a}9g2tg6N4lhkk!Qd z;G)5qXnYkeWWQ5tkYw-8FL50NZkDW9cJ!52ol$?t1g9xhY}JkW@4wO05OdWHB4W0} zTW-_;Z&G^hS#3zu8c0p40g~0=`_1Y^_IPttaAZLtB=dil%>S-m2QpfV^UwCF9hr*Z zXnahGMeuVGaCPim!I5RS20}yyX1JH+c+&r`j?_)ose&@5kO*9;;YWt_;K-Vg{#n3e z9;NA5wWhQ_lLd^B%wIBRvQA#q`8KvEK(e?*t-$S@tgY_|B9>7PEJd<@g-=?CDTdx4g27&W}EL`WgMzV07XGj*3g=GDc-6&h? zFZ$T0L6gO8ReMLk%|0g+Dk>Pp9FXzVPgpaVyx$t#QMM1@GCFv7kW7taK_evdiEN-w z#y6(hc@oMsQV8W5ErfE77DBm33!z-2g;1{1f+Ms15BPCcCFq zICBGy6b{*c&y0L5U6`A!f?=R`f0Ln0h5_>2>|9|1zQ5}>jDKN5m5(ur#R64~!vJ%v zz8cxW99Z?xFtjVGs#4W4R(fOs?p$CgrDNX&o^gP3d1Ju7hOx>AgPG^)uyBN?x#dfILDSP+t=}-HN`4-JtT1C`apI866tSfuc#Gx8)@-H6v+_G7*!Up zkY@#d?ghAG>UBr=@2{n?Tt(W!KI8f2=8Ca}2mcWNp^W41-)Be(QvE@`$FqHvMzlea@3a zn7w=lWii71M5B>!2f3t^_n!sKGN_VwhG+eM@=pN%A3T#rLmR2=Ng^gyxy)jIU$_H} ze7$FPkn1OImg|Bhx%kfbC&8o7-wR)kvKagnAR764F#K|T_^p!k;)|>v@~+6(j5o~> z;Tt-O*_yiwjeI=^jOrorXXwYs$Xu^Fk+W4CtYuA5&OqEak%(iFyJwM3*2?t0KK-!AIe3RL$F)Bd0oLIB~z$t$uli(A4_TH%{%WzsOfwS})qm`rvn=?Fr#N|5e z=8eVz(SNIhZ7tx)rGYCc<{NoM$EX11vg`unV|rnMPx;TDxuW_TGc#ggPC9m2u43Wf zb2rntrWi+zL-xscF2Jk(DemP z_v?G`-|M{uZcFnK8y9gsnKpPUANk$Di`O@rXG58PFrURUX3_1V zt!<3V{ep|&+s(<)pA7{|`4K8(d68)w3w&=#TggVb-Z7!U3AHI%LcPK`$^F>~-`E3* z8LJ+mt~I3V-nx8$p+N&}vit-xg^;K)WeY>V4RU9G(CiP8MGHsX$`TR1ya)7&rH(SFEf`3bxkVp0(vcH~OK6YM%qLF#S!o2^Hn(H|g-PNZSc zzF(CnA8e!6(g_wg)qE18;CWhdp*umOVhlV(OcO8K(SFF)I?d>z8@cu^44@!B<9vC4 z^@2S^Yqh+_`!&RWUM%{N>;075c5F1cq<7j{!)!Is8Qo?^g=G2?y{-lyA#zXwkU z!}zI@CcT#e+~<7WM&6t*T^tfobt;rS^gWI+@Tk~TcBTAy!_g1 z*eum|K$#FoBC3|f{qvJELTBNbuZm_JC zl=-{S?g;aG?B84dOz3etgUF-Y*GU_>L<(+vWVwZZe-XQf|qd#_xy`mi}L{O~y9KaR+d?$C3s^Bf$i*Y~2V< z^&_jqCNBr~XHv@mNISVKSpG$XkN$!o#t22@m>Iu78nVu}y>U-aN5uj;DKJLY+M$7^p*zqrE+=hul11S%dT~P`xhBtKlFTge{B?;zkVtv{~2mSqZ>#r`BwJ- zfSY_o(4=oH>~2tkVnh{ozFynk{`j>+YO~=*qg>e&0Li+T+v4;$m11rG$|Zbn4?CKF z^r$lMX*Xw_4Im#o0h_bJA37-#8bpS80NX~RTyYhc^5emSPekYye{~3+cOpKFre6ao z+gi}7-FUu5I=SfCNetgOO(VK}e>tDx7!@_`g`5BY0g_2XK~#kL#%LjwYqYTHc+}n@ zp1kXT)yJbOxkk)kP^Ah9Zv=#LjTS<=Mhl@_qXkE<+!lC4sPJJ7 z1BWpjw?o!?=Fx+DzfO!%@XjZo+oAc&dKAeQxN=oC*ITC(T-0Tb{{3nK)=G0|{SB># uc56~S7T;~SrO(!G^$wIP_Y?R2Zb9(I81^a0RP8N6i z5bbqJCyQye<`L880w?oyriB5J4F(}uNH%0-QOd*i!}cBiYd_sl zKg+_&lnf7BqkwVC^SkOM@R{uCJx7$P?s~{5fqW?~E9#xBw|0NhOw9XBhD(UdwBuI* z7p}lymr1nE84WpifIg=lBNVn=b{Nz#y3mVcjYy?^p8Y-# z9_sZW8;h!gBm2#0CUCMTYc(XmAL}4FD`kTsleq~k#)t}(R2|^`!I6RLJl(k|>(fU5 z54wBqnQMRZ9K&G)g9b{bI{}$#l1z)+qPIH1C$iuXl8rQ3DHZfgu9qxu%WF=ye~cs~ zy^PCaPE>*>s~Uv$2TOzm{P8kQHk}{|rXJaAaRMeA6hg9)EF>EcncHk|9jAq+qdP-^ z4ToqSWbQfE8j5DJN=vey?XozT%CcKBFNnrTQs#eTiUg9ZNU0==rY9xK=22gypT?y} z^Z;m+vHPS1`go?am%G5pG5~u_w4x@$+bwfyw6qrCs(l0s+j3*b73NCGvB#h%IR5JK(Y z+@60?BU=I1g}E|Fu8sasuQ!?hJ;4rSftX*lB1;6)6Kq4qy14=L1Rb&|XF(z#E^yXf z)}nnSlLhbFLMhmR`e?t%K%Xy~bCT@@f}%6KEQVBXv~Oe;TFhS^cU}HUdqkL>Tx7g; 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Software version: 2.0-beta
-March 20,2012 +October 31, 2012
diff --git a/docs/html/node11.html b/docs/html/node11.html index f8a49b76..525f0f36 100644 --- a/docs/html/node11.html +++ b/docs/html/node11.html @@ -70,13 +70,13 @@ solution of the original problem from the local solutions [6,7,21]. + HREF="node25.html#dd2_96">22].

Additive Schwarz preconditioners are DD preconditioners using overlapping submatrices, i.e. with some common rows, to couple the local information related to the submatrices (see, e.g., [21]). + HREF="node25.html#dd2_96">22]). The main motivation for choosing Additive Schwarz preconditioners is their intrinsic parallelism. A drawback of these preconditioners is that the number of iterations of the preconditioned solvers @@ -95,7 +95,7 @@ correction. In this context, the one-level preconditioner is often called `smoother'. Different two-level preconditioners are obtained by varying the choice of the smoother and of the coarse-level correction, and the way they are combined [21]. The same reasoning can be applied starting + HREF="node25.html#dd2_96">22]. The same reasoning can be applied starting from the coarse-level system, i.e. a coarse-space correction can be built from this system, thus obtaining multi-level preconditioners. @@ -119,17 +119,17 @@ are considered. The algebraic approach builds coarse-space corrections using onl information. It performs a fully automatic coarsening and enforces the interplay between the fine and coarse levels by suitably choosing the coarse space and the coarse-to-fine interpolation [23]. + HREF="node25.html#StubenGMD69_99">24].

MLD2P4 uses a pure algebraic approach for building the sequence of coarse matrices starting from the original matrix. The algebraic approach is based on the smoothed aggregation algorithm [1,25]. A decoupled version + HREF="node25.html#VANEK_MANDEL_BREZINA">26]. A decoupled version of this algorithm is implemented, where the smoothed aggregation is applied locally to each submatrix [24]. In the next two subsections we provide + HREF="node25.html#TUMINARO_TONG">25]. In the next two subsections we provide a brief description of the multi-level Schwarz preconditioners and of the smoothed aggregation technique as implemented in MLD2P4. For further details the reader is referred to [3,4,8,21]. + HREF="node25.html#dd2_96">22].


diff --git a/docs/html/node12.html b/docs/html/node12.html index c9dd7de1..bf201a54 100644 --- a/docs/html/node12.html +++ b/docs/html/node12.html @@ -295,7 +295,7 @@ ILU($p,t$) [20, Chapter 10]. + HREF="node25.html#Saad_book">21, Chapter 10].

A variant of the classical AS preconditioner that outperforms it @@ -387,7 +387,7 @@ of $W$ increases [7,21]. To reduce the dependency + HREF="node25.html#dd2_96">22]. To reduce the dependency of the number of iterations on the degree of parallelism we may introduce a global coupling among the overlapping partitions by defining a coarse-space approximation multi-level preconditioners, can significantly reduce the computational cost of preconditioning with respect to the two-level case (see [21, Chapter 3]). + HREF="node25.html#dd2_96">22, Chapter 3]). Additive and hybrid multilevel preconditioners are obtained as direct extensions of the two-level counterparts. For a detailed descrition of them, the reader is referred to [21, Chapter 3]. + HREF="node25.html#dd2_96">22, Chapter 3]. The algorithm for the application of a multi-level hybrid post-smoothed preconditioner $R_l$. -

+
diff --git a/docs/html/node13.html b/docs/html/node13.html index aa40bbbb..b4bd7eae 100644 --- a/docs/html/node13.html +++ b/docs/html/node13.html @@ -66,7 +66,7 @@ the coarse-level matrix $A_C$, MLD2P4 uses the smoothed aggregation algorithm described in [1,25]. + HREF="node25.html#VANEK_MANDEL_BREZINA">26]. The basic idea of this algorithm is to build a coarse set of vertices 4]. According to [25], a modification of + HREF="node25.html#VANEK_MANDEL_BREZINA">26], a modification of this algorithm has been actually considered, in which each aggregate 3,4,24]. + HREF="node25.html#TUMINARO_TONG">25].

The prolongator 1,23]. + HREF="node25.html#StubenGMD69_99">24]. A simple choice for

-
+
Figure 1: Application of the multi-level hybrid post-smoothed preconditioner.
Table 1: Preconditioner types, corresponding strings and default choices. diff --git a/docs/html/node15.html b/docs/html/node15.html index 8488f9ad..54190eb1 100644 --- a/docs/html/node15.html +++ b/docs/html/node15.html @@ -86,7 +86,7 @@ the corresponding Fortran 95 codes are available in examples/fileread/ -
+
Figure 2: Setup and application of the default multi-level Schwarz preconditioner. @@ -203,7 +203,7 @@ and linked to the MLD2P4 library.

-

+
@@ -235,7 +235,7 @@ Setup of a hybrid three-level Schwarz preconditioner.

-

+
Figure 3: Setup of a hybrid three-level Schwarz preconditioner.
@@ -267,7 +267,7 @@ Setup of an additive three-level Schwarz preconditioner.

-

+
Figure 4: Setup of an additive three-level Schwarz preconditioner.
diff --git a/docs/html/node18.html b/docs/html/node18.html index 4c84c201..c6521112 100644 --- a/docs/html/node18.html +++ b/docs/html/node18.html @@ -133,7 +133,7 @@ refer to Section 4.


-
+
Figure 5: Setup of a one-level Schwarz preconditioner.
Table 2: Parameters defining the type of multi-level preconditioner. @@ -177,7 +177,7 @@ Parameters defining the type of multi-level preconditioner.


-
+
Table 3: Parameters defining the one-level preconditioner used as smoother. @@ -277,7 +277,7 @@ Parameters defining the one-level preconditioner used as smoother.


-
+
Table 4: Parameters defining the aggregation algorithm. @@ -380,7 +380,7 @@ Parameters defining the aggregation algorithm.


-
+
Table 5: Parameters defining the coarse-space correction at the coarsest diff --git a/docs/html/node24.html b/docs/html/node24.html index e3fd7c4d..4e0f5fcc 100644 --- a/docs/html/node24.html +++ b/docs/html/node24.html @@ -59,41 +59,43 @@ License

The MLD2P4 is freely distributable under the following copyright terms: 

 
-                         MLD2P4  version 1.1
-MultiLevel Domain Decomposition Parallel Preconditioners Package
-           based on PSBLAS (Parallel Sparse BLAS version 2.3.1)
 
-(C) Copyright 2008, 2009
+ 
+                           MLD2P4  version 2.0
+  MultiLevel Domain Decomposition Parallel Preconditioners Package
+             based on PSBLAS (Parallel Sparse BLAS version 3.0)
+  
+  (C) Copyright 2008,2009,2010, 2010
 
-                    Salvatore Filippone  University of Rome Tor Vergata       
-                    Alfredo Buttari      University of Rome Tor Vergata
-                    Pasqua D'Ambra       ICAR-CNR, Naples
-                    Daniela di Serafino  Second University of Naples
+                      Salvatore Filippone  University of Rome Tor Vergata
+                      Alfredo Buttari      CNRS-IRIT, Toulouse
+                      Pasqua D'Ambra       ICAR-CNR, Naples
+                      Daniela di Serafino  Second University of Naples
 
-
-Redistribution and use in source and binary forms, with or without
-modification, are permitted provided that the following conditions
-are met:
-  1. Redistributions of source code must retain the above copyright
-     notice, this list of conditions and the following disclaimer.
-  2. Redistributions in binary form must reproduce the above copyright
-     notice, this list of conditions, and the following disclaimer in the
-     documentation and/or other materials provided with the distribution.
-  3. The name of the MLD2P4 group or the names of its contributors may
-     not be used to endorse or promote products derived from this
-     software without specific written permission.
-
-THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
-``AS IS'' AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED
-TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
-PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE MLD2P4 GROUP OR ITS CONTRIBUTORS
-BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
-CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
-SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
-INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
-CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
-ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
-POSSIBILITY OF SUCH DAMAGE.
+ 
+  Redistribution and use in source and binary forms, with or without
+  modification, are permitted provided that the following conditions
+  are met:
+    1. Redistributions of source code must retain the above copyright
+       notice, this list of conditions and the following disclaimer.
+    2. Redistributions in binary form must reproduce the above copyright
+       notice, this list of conditions, and the following disclaimer in the
+       documentation and/or other materials provided with the distribution.
+    3. The name of the MLD2P4 group or the names of its contributors may
+       not be used to endorse or promote products derived from this
+       software without specific written permission.
+ 
+  THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
+  ``AS IS'' AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED
+  TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
+  PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE MLD2P4 GROUP OR ITS CONTRIBUTORS
+  BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
+  CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
+  SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
+  INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
+  CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
+  ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
+  POSSIBILITY OF SUCH DAMAGE.

diff --git a/docs/html/node25.html b/docs/html/node25.html index dbcf69df..be3c657c 100644 --- a/docs/html/node25.html +++ b/docs/html/node25.html @@ -103,7 +103,7 @@ Cambridge University Press. P. D'Ambra, D. di Serafino, S. Filippone, MLD2P4: a Package of Parallel Multilevel Algebraic Domain Decomposition Preconditioners -in Fortran 95, ICAR-CNR Technical Report RT-ICAR-NA-09-01, 2009. +in Fortran 95, ACM Trans. Math. Softw., 37(3), 2010.

9
T.A. Davis, @@ -140,59 +140,69 @@ BIT Numerical Mathematics, 43, 2003, 945-959.

15
S. Filippone, A. Buttari, -PSBLAS-2.3 User's Guide. A Reference Guide for the Parallel Sparse BLAS Library, 2008, +PSBLAS-3.0 User's Guide. A Reference Guide for the Parallel Sparse BLAS Library, 2012, available from http://www.ce.uniroma2.it/psblas/. -

16 + +

+

16 +
+Salvatore Filippone and Alfredo Buttari. +Object-Oriented Techniques for Sparse Matrix Computations in Fortran + 2003. +ACM Trans. on Math Software, 38(4), 2012. + +

+

17
S. Filippone, M. Colajanni, PSBLAS: A Library for Parallel Linear Algebra Computation on Sparse Matrices, ACM Transactions on Mathematical Software, 26, 4, 2000, 527-550. -

17 +

18
W. Gropp, S. Huss-Lederman, A. Lumsdaine, E. Lusk, B. Nitzberg, W. Saphir, M. Snir, MPI: The Complete Reference. Volume 2 - The MPI-2 Extensions, MIT Press, 1998. -

18 +

19
C. L. Lawson, R. J. Hanson, D. Kincaid, F. T. Krogh, Basic Linear Algebra Subprograms for FORTRAN usage, ACM Transactions on Mathematical Software, 5, 1979, 308-323. -

19 +

20
X. S. Li, J. W. Demmel, SuperLU_DIST: A Scalable Distributed-memory Sparse Direct Solver for Unsymmetric Linear Systems, ACM Transactions on Mathematical Software, 29, 2, 2003, 110-140. -

20 +

21
Y. Saad, Iterative methods for sparse linear systems, 2nd edition, SIAM, 2003

-

21 +

22
B. Smith, P. Bjorstad, W. Gropp, Domain Decomposition: Parallel Multilevel Methods for Elliptic Partial Differential Equations, Cambridge University Press, 1996. -

22 +

23
M. Snir, S. Otto, S. Huss-Lederman, D. Walker, J. Dongarra, MPI: The Complete Reference. Volume 1 - The MPI Core, second edition, MIT Press, 1998. -

23 +

24
K. Stüben, Algebraic Multigrid (AMG): an Introduction with Applications, in A. Schüller, U. Trottenberg, C. Oosterlee, editors, Multigrid, Academic Press, 2000. -

24 +

25
R. S. Tuminaro, C. Tong, Parallel Smoothed Aggregation Multigrid: Aggregation Strategies on Massively Parallel Machines, in J. Donnelley, editor, Proceedings of SuperComputing 2000, Dallas, 2000. -

25 +

26
P. Vanek, J. Mandel and M. Brezina, Algebraic Multigrid by Smoothed Aggregation for Second and Fourth Order Elliptic Problems, diff --git a/docs/html/node26.html b/docs/html/node26.html index b626a29f..271f7714 100644 --- a/docs/html/node26.html +++ b/docs/html/node26.html @@ -63,7 +63,7 @@ Mathematics Department, Macquarie University, Sydney. The command line arguments were:
latex2html -local_icons -noaddress -dir ../../html userhtml.tex

-The translation was initiated by Salvatore Filippone on 2012-03-20 +The translation was initiated by Salvatore Filippone on 2012-10-04

diff --git a/docs/html/node3.html b/docs/html/node3.html index 7cfba9b4..476a4159 100644 --- a/docs/html/node3.html +++ b/docs/html/node3.html @@ -59,7 +59,7 @@ General Overview

The MULTI-LEVEL DOMAIN DECOMPOSITION PARALLEL PRECONDITIONERS PACKAGE BASED ON PSBLAS (MLD2P4) provides multi-level Schwarz preconditioners [21], + HREF="node25.html#dd2_96">22], to be used in the iterative solutions of sparse linear systems:

@@ -83,7 +83,8 @@ Ax=b, where $A$ is a square, real or complex, sparse matrix with a symmetric sparsity pattern. + ALT="$A$"> is a square, real or complex, sparse matrix with a symmetric +sparsity pattern. These preconditioners have the following general features:
    @@ -98,25 +99,27 @@ explicitly using any information on the geometry of the original problem (e.g. t discretization of a PDE). The smoothed aggregation technique is applied as algebraic coarsening strategy [1,25]. + HREF="node25.html#VANEK_MANDEL_BREZINA">26].

-The package is written in Fortran 95, following an -object-oriented approach through the exploitation of features -such as abstract data type creation, functional -overloading and dynamic memory management. -The parallel implementation is based -on a Single Program Multiple Data (SPMD) paradigm for distributed-memory architectures. -Single and double precision implementations of MLD2P4 are available for both the -real and the complex case, that can be used through a single interface. +Version 2.0 of the package is written in Fortran 2003, following an +object-oriented design through the exploitation of features +such as abstract data type creation, functional overloading and +dynamic memory management. +The parallel implementation is based on a Single Program Multiple Data +(SPMD) paradigm for distributed-memory architectures. Single and +double precision implementations of MLD2P4 are available for both the +real and the complex case, that can be used through a single +interface.

-MLD2P4 has been designed to implement scalable and easy-to-use multilevel preconditioners -in the context of the PSBLAS (Parallel Sparse BLAS) -computational framework [16]. +MLD2P4 has been designed to implement scalable and easy-to-use +multilevel preconditioners in the context of the PSBLAS + (Parallel Sparse BLAS) computational framework [17,16]. PSBLAS is a library originally developed to address the parallel implementation of iterative solvers for sparse linear system, by providing basic linear algebra operators and data management facilities for distributed sparse matrices; it @@ -128,11 +131,11 @@ parallel sparse linear algebra kernels, to pursue goals such as performance, portability, modularity ed extensibility in the development of the preconditioner package. On the other hand, the implementation of MLD2P4 has led to some revisions and extentions of the PSBLAS kernels, leading to the -recent PSBLAS 2.0 version [15]. The inter-process comunication required by MLD2P4 is encapsulated into the PSBLAS routines, except few cases where MPI [22] is explicitly called. Therefore, MLD2P4 can be run on any parallel + HREF="node25.html#MPI1">23] is explicitly called. Therefore, MLD2P4 can be run on any parallel machine where PSBLAS and MPI implementations are available.

@@ -147,6 +150,13 @@ On the other hand, the routines of the middle and lower layer can be used and ex by expert users to build new versions of multi-level Schwarz preconditioners. We provide here a description of the upper-layer routines, but not of the medium-layer ones. +

+The user interface of version 2.0 is essentially identical to that of +version 1.1; the internal implementation however has been changed a +lot, and it has become much easier to extend the library by adding new +smoothers and/or solvers, thanks to the Fortran 2003 features +exploited in the design of PSBLAS 3.0. +

This guide is organized as follows. General information on the distribution of the source code is reported in Section 2, while details on the configuration @@ -155,7 +165,7 @@ multi-level Schwarz preconditioners based on smoothed aggregation is provided in Section 4, to help the users in choosing among the different preconditioners implemented in MLD2P4. The basics for building and applying the preconditioners with the Krylov solvers implemented in PSBLAS are reported in Section 5, where the -Fortran 95 codes of a few sample programs are also shown. A reference guide for +Fortran codes of a few sample programs are also shown. A reference guide for the upper-layer routines of MLD2P4, that are the user interface, is provided in Section 6. The error handling mechanism used by the package is briefly described in Section 7. The copyright terms concerning the distribution and modification diff --git a/docs/html/node6.html b/docs/html/node6.html index ca059c69..ad75d3a9 100644 --- a/docs/html/node6.html +++ b/docs/html/node6.html @@ -62,7 +62,7 @@ The following base libraries are needed:

[11,12,18] Many vendors provide optimized versions + HREF="node25.html#blas1">19] Many vendors provide optimized versions of the Basic Linear Algebra Subprograms; if no vendor version is available for a given platform, the ATLAS software (http://math-atlas.sourceforge.net/) @@ -77,15 +77,15 @@ The following base libraries are needed:
MPI
[17,22] A version of MPI is available on most + HREF="node25.html#MPI2">18,23] A version of MPI is available on most high-performance computing systems; only version 1.1 is required.
PSBLAS
[15,16] Parallel Sparse BLAS is + HREF="node25.html#psblas_00">17] Parallel Sparse BLAS is available from
http://www.ce.uniroma2.it/psblas; version 3.0 (or later) is required. Indeed, all the prerequisites diff --git a/docs/html/node7.html b/docs/html/node7.html index 0b4146fb..24a9dd44 100644 --- a/docs/html/node7.html +++ b/docs/html/node7.html @@ -81,7 +81,7 @@ for multilevel preconditioners may change to reflect their presence.
SuperLU_Dist
[19] + HREF="node25.html#SUPERLUDIST">20] A sparse direct factorization package available from the same site as SuperLU; provides parallel factorization and triangular system solution for double precision real and complex data. diff --git a/docs/html/userhtml.html b/docs/html/userhtml.html index 351b0f09..fa88d1f2 100644 --- a/docs/html/userhtml.html +++ b/docs/html/userhtml.html @@ -63,7 +63,7 @@ University of Rome ``Tor Vergata'', Italy
Software version: 2.0-beta
-March 20,2012 +October 31, 2012
diff --git a/docs/mld2p4-1.1-guide.pdf b/docs/mld2p4-2.0-guide.pdf similarity index 81% rename from docs/mld2p4-1.1-guide.pdf rename to docs/mld2p4-2.0-guide.pdf index 92a5c8d4..9636bc20 100644 --- a/docs/mld2p4-1.1-guide.pdf +++ b/docs/mld2p4-2.0-guide.pdf @@ -154,7 +154,7 @@ endobj << /S /GoTo /D [106 0 R /Fit ] >> endobj 108 0 obj << -/Length 1169 +/Length 1183 >> stream 0 g 0 G @@ -176,7 +176,7 @@ BT /F17 11.9552 Tf 218.644 -79.389 Td [(P)31(asqua)-375(D'Am)31(bra)]TJ/F37 11.9552 Tf -31.595 -13.947 Td [(ICAR-CNR,)-326(Naples,)-327(Italy)]TJ/F17 11.9552 Tf 20.434 -29.39 Td [(Daniela)-375(di)-375(Sera\014no)]TJ/F37 11.9552 Tf -62.784 -13.948 Td [(Second)-326(Univ)27(ersit)27(y)-326(of)-327(Na)1(ples,)-327(Italy)]TJ/F17 11.9552 Tf 60.715 -29.39 Td [(Salv)62(atore)-375(Filipp)-31(one)]TJ/F37 11.9552 Tf -93.327 -13.947 Td [(Univ)27(ersit)27(y)-326(of)-326(Rome)-327(\134T)82(or)-326(V)81(ergata",)-326(Italy)]TJ 0 g 0 G 0 g 0 G - 100.3 -78.924 Td [(Soft)27(w)28(are)-327(v)27(ersion)1(:)-436(1.1)]TJ 28.358 -13.948 Td [(Marc)27(h)-326(13,)-326(2009)]TJ + 73.961 -78.924 Td [(Soft)27(w)27(a)1(re)-327(v)27(ersion:)-435(2.0-b)-27(eta)]TJ 45.914 -13.948 Td [(Octob)-27(er)-326(31,)-327(2012)]TJ 0 g 0 G 0 g 0 G ET @@ -327,7 +327,7 @@ BT 0 g 0 G [-711(.)-500(.)-500(.)-500(.)-500(.)-500(.)-500(.)-500(.)-500(.)-499(.)-500(.)-500(.)-500(.)-500(.)-500(.)-500(.)-500(.)-500(.)-500(.)-500(.)-500(.)-500(.)-500(.)-500(.)]TJ 0 g 0 G - [-1781(5)]TJ + [-1781(4)]TJ 0 g 0 G 0 0 1 rg 0 0 1 RG 0 -13.549 Td [(3.3)-1022(Con\014guration)-333(options)]TJ @@ -697,8 +697,8 @@ endobj /Font << /F15 123 0 R >> /ProcSet [ /PDF /Text ] >> endobj -172 0 obj << -/Length 8043 +173 0 obj << +/Length 8133 >> stream 0 g 0 G @@ -710,7 +710,7 @@ BT 0 g 0 G /F17 14.3462 Tf -406.997 -35.866 Td [(1)-1125(General)-375(Ov)31(erview)]TJ/F15 10.9091 Tf 0 -24.352 Td [(The)]TJ/F41 10.9091 Tf 23.408 0 Td 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-6179,7 +6182,7 @@ y" _RPc f:_WLH|MDouͤЬeQ˶9Cmո7d{C#WS<Ǩ]ʤ!lٕn .jo?LbO}-n$9ӍjaЌPaOΉ}Vux8 woC endstream endobj -522 0 obj << +523 0 obj << /Type /FontDescriptor /FontName /KZBLKD+CMR10 /Flags 4 @@ -6191,13 +6194,13 @@ endobj /StemV 69 /XHeight 431 /CharSet (/A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/R/S/T/U/V/W/X/Y/a/b/bracketleft/bracketright/c/caron/colon/comma/d/dieresis/e/eight/emdash/endash/equal/exclam/f/ff/ffi/fi/five/fl/four/g/h/hyphen/i/j/k/l/m/n/nine/o/one/p/parenleft/parenright/period/plus/q/quotedblleft/quotedblright/quoteleft/quoteright/r/s/semicolon/seven/six/slash/t/three/tilde/two/u/v/w/x/y/z/zero) -/FontFile 521 0 R +/FontFile 522 0 R >> endobj -523 0 obj << -/Length1 1353 -/Length2 7264 +524 0 obj << +/Length1 1335 +/Length2 6996 /Length3 0 -/Length 8617 +/Length 8331 >> stream %!PS-AdobeFont-1.1: CMR12 1.0 @@ -6213,7 +6216,7 @@ stream /ItalicAngle 0 def /isFixedPitch false def end readonly def -/FontName /GKTJSV+CMR12 def +/FontName /AMOVXF+CMR12 def /PaintType 0 def /FontType 1 def /FontMatrix [0.001 0 0 0.001 0 0] readonly def @@ -6222,14 +6225,15 @@ end readonly def dup 65 /A put dup 67 /C put dup 73 /I put -dup 77 /M put dup 78 /N put +dup 79 /O put dup 82 /R put dup 83 /S put dup 84 /T put dup 85 /U put dup 86 /V put dup 97 /a put +dup 98 /b put dup 99 /c put dup 58 /colon put dup 44 /comma put @@ -6237,13 +6241,11 @@ dup 100 /d put dup 101 /e put dup 102 /f put dup 103 /g put -dup 104 /h put dup 45 /hyphen put dup 105 /i put dup 108 /l put dup 109 /m put dup 110 /n put -dup 57 /nine put dup 111 /o put dup 49 /one put dup 112 /p put @@ -6264,35 +6266,43 @@ readonly def currentdict end currentfile eexec oc;j~EЪ*BgNӽ ؑlKq*޲Xws|QFqv`zXMyp"5O˩YŝP(DT![v67XFlU&3!Rq4wσ~j+ou\@[6]nhmlhaH+4/?3&n=a6E#|~.ԅˠLw2.槝sNY ڻ.,VnNX3|裠k(QIOs m;fߖC1}_a Io#0wݙ\P,f *bG3Z2کP8L3r[vnc_Eh~g9|M) }YaѕH|1m![AzXpPNCU7Uֲ7ΖTgx_hyW^]W}s_Zfs@dYr ȟsy&vJx)ݱ~Kq -45hL#q:4pP?g |GJSn^i26M Ęz0. v31껰xCj 7}0a `~iEfÎ}O>&*gϿ60CL͘sc·^X0IF +3yP.wP=vH?tx??jKvcJ ފO(WfnYc+ՈuMWkSMpy2La }gH,HA ngVU4NN7z3=ʿM1(2iznl7 J[7һDH]WUMi)hiwuPJv+]/XNkn|´?4ҫf kE{'ǺW1 os!w#v. -RGgkx0S"MB$0kSlk6C)R`+&gljᑢ_5s$ U$;|Q|nÜ2 @%ړqP c TުOe[H__i:&g&A`ܧ%2V=&+#hOSV({.4_cR~]cx)S7.)*eIa4CԀw٫u1XU%̀OZnl:}"ՋbNKOY]3dqwαR즰}Hڟ '!:[%eD|vne LLJ4|*^z?#@iN +ũٵ^͓ulJv~-Xr.ȥX\L'^!9J d:0M/&a1K.ڈLp ~xဦ&{;.3)KOݩKN:ZאMPZe˝qDw+ON_ʼl S1cNyYǒM&;uV ڶ| -q| LSsGkNb-mngoYL|GT7K6tPcN5`u -s ,ֹG]XɈ{ ;ծ4ܭ :\N?5 %/%mZVL]eXӌR#ߎeSWNԊ8AwA%;\4;" n\G7 2"TDʼAxlk;YZI#i-Z>t" -![+=ܞT`t.%drӪpG~|8Fb,Xd@ޞi(j^xAVA 4#}ܺZ͏_oiUU-u֟ (?wVݯgRv[sgSf5w.F|zQpTV$3Mu;^Q26%DQgQ.̺h=z Zt>*O961XU("8ّT"$Yɣ;f$AҨU*ZYu mY%;&jt&ceX{$Oc_QЀ[Pά,.&].6f`|5zuOrz+/E -8hnSHkw]9xd&@ @:߀Sp@7{Z46֐c}hpPI4Y-Q=>X}qJb{FKDRLS40 cc, QD4$En^Bn 4`$7yoK]o[g^!YzΖ|Ԥ)MMk(r0ҩ*kμHfO!C\Id4N:39ێ 7Ƣ`\)tVJMܔ߯lG]cH\ MggJc<ӇD4ЅQ4RMLiy+7a~]1Y>Uk{\d0:B 7c"!FS:廊_L<?2>ũ(PJfQ[5-Or捱{um?h^I]Rf<6zhh0 wT շ+3l=[pEPCFff{Ł/u&VSL4*kƲ:(57yW\ -n5 Q5^ ot- 8x"t1DẔ\ͯ"wBY]egɥ?(^ْ2XerJdq,\A!N7 ګu{#Fb |ต"S!;;Zˁ~xLaO1k%n[_vD JstzfiЭȑr FGWcgZ2FbYC$,ڔz0,3I]r7pi0CH9Ci5SYg_9m5Si {wmvȚǍ\ڣh6jasY)Kw_'9JS:T4(_K>Ć`t|+ qd[mgHdQƚ4 `'iWEX/"GDŽOwWПR[m<.fx ophu FS]h6?s, -虈3L7P7:<[gjUtv,KׁC]@`CCO\ba7^Aޭ9U[5ۿ <|nu^y+y_ԪC/°a" -<*Oǟv"&D *﮾rnѸQ%YLX* -G}NL(jj< ጿ-tQ0ksk/ZWjg<8bJMGոRњ{{7{1qT 6V=bf#x˄RVW:E(CZ@UUK:|'u4<ϮC0T8 _䏉& }HS PK=w`2@Hf,sUZ?;Ni^P (t{TX+zf3J xVuCWh6Y7Kԕ͂t\*)hues,ʳ r\=(3:-cq-#`,f?G[fj.JE3izK愩|5J}7?U8!ZhOr`? OTK7RǴ xL=VQ3O wjyp\Qho =&i9@]5aAmQy+OAuP,\w9I[XǓuѴ2Ogfg75O"=tMeIqK5ӵ8Ҝ5 BU)ܜ4QO<2h;yy+wEBV3hq1)(ZNZSj,)u&*9q&وVF7!e8b- 'E7ncGA՟ j;97o;L:TAtCCI ry%h"8Ppm\#_%i%U伀8iq2 ?`(f*@^#& һσ"_&=1GߊϞuVtc8"k8+NpEESĂW{9o -2^{ڀ?,J8Ynbjl-[a ǔ 4 ڛ}x-=6 v ~oQe !cY+[ *DQySzi=+ҾǾ71άaY]jK=jùHҨ!AKt4eįbWv٪eQʌ7z2?a҄q̮0Yhҿ=THdjRG(i%s1߀8.?9%KdѭZ!yDEԎp7A%bSq4{@@ ܜhc 7lE`4%'|ߣ@82_ \tpMdC~wv^$Fd+i%cU(l[v' G~?ho7>U\zAmn?5=:6B@>rFChsB"j2Q()_ a:LxT7EY<{0>ݪK|x?9m]k?5uE%BF5ώ0k'[ǮGǍħ.&QC ZBުXU63g{s'.\[TXFg;&6k`յ_-.4 b -Z__PZ~ئb -耹MׅbCړv&}PkKd$ ۳'jmL,vCl_<5x@ F^CiZ+3΅(h-ܶP8b$9 :QR fnH/ֹ=' Ald -=w: Rkd_`IO0`/a%e@NdVJCނT{p QnͶr=콽/r؆55p5O|V(Qb~}%bO[?S*}RS<oun|7=c ! jJFeڒl 6P#>4*iLU({j"†ɢrʓV[Gf"z[&YKʬc $d1 =nAsi] FHBJ熏g1>#j7X̋uou·z ԻDLтXax$ -|PB QDpGG-#P xXFC] '&wj%W@U~Dɱٗ1/֗D1JgoL6I烮?2}mƄHAW!]&:M[zտ;BaiB78dOI!vT!f9?IVlrC:dÐiK=ooy7+";#Oo+_03"V]'.MռNx0`UjM}?Q$x ŌjEM7 !CHƽ۽bk|y&a+gxLTȑ`ԣi +45hL#q:4pP?g |GJSn^i26M Ęz0. v31껰xCj 7}0a `~iEfÎ}O>&*gϿ60CL͘sc·^X0IF +3yP.wP=vH?tx??jKvcJ ފO(WfnYc+ՈuMWkSMpy2La }gH,HA ngVU4NN69<o\V\;ʭT!6od".JCȦ<^"ɶ248[;OD$Ќo/0OxPɮ^[VZ)8I:u{$xRl4s'' DaqpBϐFW|>_taLB&ŊPp9L\Ӈ_FXnY`2n6C5ABk@ruWPx +Պ=Y4\'7B'L`Բk X݇Ρd;u+7үSJk!+ N0ȝ"FQꖨֆ©Tq\?24A(ПSKߎf-pEMnؙzHc"ˀtn@yq+^>[JgX6W'8pEl/7d9z/13cեgRt>"RU΂@G&}kq9e#r%o +y + +ij$yEo6uH1W/܆y7su,/R>^Y3H=j=J'@RfC>̮rX'Ѵ_Ybw@ׇ1YÊ Ee{I|"/n,r#l%eUd$qQC]ĿdaksĒ>> +go] ;u]z_(8ёl\u6 I Ϡp>5?fш+20H/^so^AL K؅m6lR|U_WF0*hXq pi~RX2oW;7ۏ}S<+dȡ!w 2@t3[s q[v-f.H[r{g=uSw@ި>,g.]޷%lFp65A<&_bz ,WEe*%AŠQ<詅iwJ;;ߨS br úWMwYᐼ*w `.(l1 %.v3-Wc\at[ +f2GAhs\Rj7+0Md 9K-$*+fQjWUz="I) + YVvIOR +469jkyōLUlV(W𱪙{Ou{_ ]'4 >]Y0 Uk{X"YRD^sTRrVZ +uG`c*|b vH?c/>=}؛4PԻ}I\mkSUgeaEBxFd'=N?I~n[Sަ\6e/L #a\fP]aߒ£&쭆B6p Uk mS`yrAJN=H*C0TB缘,*Jw%e!~w>;%dC2_.HpG~U +jmc_Vr>Ȱ\խ6GҺR [ȊCQ^\iյ=x`lh*y^yO(난ͷ!+?Es/ V1߱ +3"Ů.Ega%- Ǫ8.CA6~~LbaTfľ>= U +aTV[M[J8,o̖R =)Ț_|T1Bfi襂R45oR`V-F5-[u|>%gIPXPypV*$LT]Aމij6+QeR~V:8KN_4hC4LlM%%r5, +4Uao +6g"xLm;Y"mHglk +X^};t}=i[?àB//RCvK##mh?<JD˰^3R:JX7'j>ZRbs[`uΖ&|#έ ]+ڹ :0:vEKƕ[ +uk͇F? ~{Yv,A;&K3W[Mw2Rv2rӅT`s;6.s2.%dWh6eRqi:zM'[}l+NdcdV3QHZX TeX"xb*JL k:ɜ#1A&gsW_=\rpq g{B~ X5Ij1I-5aZ\O:??-˥#u~O Wޡ2k*B?edAͥ"X:} [tG=nF#T®ՊkP>a}X6Kw"r┬ HkYVz^_*dނ)}BIL/M%d1:/YrKp;*=R=UhB@GMߥmim9j:i[\mj:fgGV6P.|i_xuSN# ]x,a])W? +Wk +tA⛢Exb5[zxކOC"(hTV-آ kRF4VS:YX Ty->̐ۓ z3b/_NT`J<Ԫ}p㲔C_lbjfr{c8CкXڵ/kG\6NU3/>fw=$p>\$` y^21~Q +UnnB\#_VN ^ĭ#L(/vړV`Zx3dϸΆ ld'~".0K$|**i3),6QL/{)=@O,fSЋʳ#P~l! o4e[>nlA Ii֘U׾"+@;]Wn/!UZYb !^\-kɹ >v ctPHB|ZR@7E:v@s;p3T@y Ba:U}" endstream endobj -524 0 obj << +525 0 obj << /Type /FontDescriptor -/FontName /GKTJSV+CMR12 +/FontName /AMOVXF+CMR12 /Flags 4 /FontBBox [-34 -251 988 750] /Ascent 694 @@ -6301,10 +6311,10 @@ endobj /ItalicAngle 0 /StemV 65 /XHeight 431 -/CharSet (/A/C/I/M/N/R/S/T/U/V/a/c/colon/comma/d/e/f/g/h/hyphen/i/l/m/n/nine/o/one/p/period/quotedblleft/quotedblright/r/s/t/three/two/v/w/y/zero) -/FontFile 523 0 R +/CharSet (/A/C/I/N/O/R/S/T/U/V/a/b/c/colon/comma/d/e/f/g/hyphen/i/l/m/n/o/one/p/period/quotedblleft/quotedblright/r/s/t/three/two/v/w/y/zero) +/FontFile 524 0 R >> endobj -525 0 obj << +526 0 obj << /Length1 752 /Length2 1167 /Length3 0 @@ -6343,7 +6353,7 @@ _2 ias1 +'_m 'd,]X{&41Y9HY_\*2|$g}/M#9]rZRa^3cs!7烬yD6$1/nh endstream endobj -526 0 obj << +527 0 obj << /Type /FontDescriptor /FontName /TQVOAL+CMR7 /Flags 4 @@ -6355,9 +6365,9 @@ endobj /StemV 79 /XHeight 431 /CharSet (/one/plus) -/FontFile 525 0 R +/FontFile 526 0 R >> endobj -527 0 obj << +528 0 obj << /Length1 786 /Length2 1479 /Length3 0 @@ -6401,7 +6411,7 @@ Df 9cO `+m.f)KZҜ/ȫMf?PG,|Ϲq-Zy#nbly@Jnz2GE]=̤+&@<~h'u &B3+*/h:,uv޽GCb-ĈizzeԠ=˻iK_xjx%ZUL1(Se]/^ǝ ama[ ‘a`TQ)|FNj+mC[P+> endobj -529 0 obj << +530 0 obj << /Length1 1016 /Length2 2355 /Length3 0 @@ -6472,7 +6482,7 @@ oS 6ٜ[A#=MdP'V\'C E4 9\d{$eMqvbN6իpE$3cʝpR]Z<t*!'ě4a{K ?JeRraΝ&>6.ɯ*]#O0^N+k]1<ÐŮ*g5]_$9^6oMdGj endstream endobj -530 0 obj << +531 0 obj << /Type /FontDescriptor /FontName /WYYAGH+CMSY10 /Flags 4 @@ -6484,9 +6494,9 @@ endobj /StemV 85 /XHeight 431 /CharSet (/Rfractur/backslash/bar/braceleft/braceright/bullet/element/greaterequal/minus/negationslash/propersubset/propersuperset/union) -/FontFile 529 0 R +/FontFile 530 0 R >> endobj -531 0 obj << +532 0 obj << /Length1 745 /Length2 581 /Length3 0 @@ -6521,7 +6531,7 @@ currentfile eexec AȜ;k5,4Cof^^ "XWeBL'>@{.'b[>PP.DW,={ #VX6nzT`qN&=`~+GH c%=TF{v/҄fwsj j-${fwkxze4G$JB%p"&g4BW[x-n)ǡ~('?CE-QeSO9sY=`lz%i$/neu*TVyBܡ mM/|8ySx{+˄sߨ39Ӟ:QXE':c *ȝ?/vwC'kH endstream endobj -532 0 obj << +533 0 obj << /Type /FontDescriptor /FontName /PXBGHL+CMSY7 /Flags 4 @@ -6533,9 +6543,9 @@ endobj /StemV 93 /XHeight 431 /CharSet (/minus) -/FontFile 531 0 R +/FontFile 532 0 R >> endobj -533 0 obj << +534 0 obj << /Length1 765 /Length2 745 /Length3 0 @@ -6570,7 +6580,7 @@ currentfile eexec oc;j~EЪ/ ȭX~id}S5Q!gtⵎkJc;rN^X5.Sy +'IqV:r㚉#,# dBZ *R*"7٨y! [R߻*|]~[C֨a[#ԙ jY!4J"3&ejc\J$2626wIaUIrnFB/Г(Hp%#O.,snݸt%\b9?_\ <+n6rBPYԥ Tlp4űI=+rp% !<'y1# 0wyr(X|X> endobj -535 0 obj << -/Length1 1707 -/Length2 14054 +536 0 obj << +/Length1 1724 +/Length2 14199 /Length3 0 -/Length 15761 +/Length 15923 >> stream %!PS-AdobeFont-1.1: CMTI10 1.00B @@ -6604,7 +6614,7 @@ stream /ItalicAngle -14.04 def /isFixedPitch false def end readonly def -/FontName /CXHZKE+CMTI10 def +/FontName /PJRLOW+CMTI10 def /PaintType 0 def /FontType 1 def /FontMatrix [0.001 0 0 0.001 0 0] readonly def @@ -6673,6 +6683,7 @@ dup 119 /w put dup 120 /x put dup 121 /y put dup 122 /z put +dup 48 /zero put readonly def /FontBBox{-163 -250 1146 969}readonly def currentdict end @@ -6688,59 +6699,67 @@ z8u .{IQ7^N-+C #̲]\M؅1 pk2 \t,o)2TTڮw}Ҏvq `;lSgs3c-h}W9;ڤ9Ö`2 ${};;m򉅘^l1'C*~O`XUn0x|cɾ'iD%WNCەU.9R*R?nLWˆs/[趡ۆ8>H@#ٻx wf} ayBR C1|P|'r,߰INJU`DkUQe ]Am\"GmFO )2rIuW\SW,'vdy]eqXH0#~Z9|pŞPOHau`Cb鬅<=?t8!-~C0VY-aht`rxK[3,f @=]wG2C#܎d5BYIWu8]o\ !~}SJZ݀$c̪OJ.k0F)L0Gɴ Mں45Ȟ1l֕(4݃h8?CL7HHǷh+ }$ DO.ZkJ[Gtכ?Tcp{nRƷWHW%8޸d -7Pep_=R(`9p++9+@dW4Å5]ĕB⯞dPkbܕ'm4vLδS*0\-JUr%'Tq~̈́\5O?ƯE6"Abe(eSd87mQX7IR*tGPz%x!vxJ+#}A|?qIHHje6h2[r"l˦1צAfZGn懗{]}%,Ɵ!@cϿi f&瀌] xRs;AZ ;S:|$8H*\Eϕ/j=F~lR!꿸dq4*x(B"ZY4RN f8XW^eńiZN'Y - :1@H9D0kq'Su|#Η<{8t؞#DfQ_4pC&D409oZBԕV4*2t -ӄ/SS뼗%ĝwhtB*mtX>aO Zbc&sYrw^&euL ( 5H$!(xJM Ply/6qc2Poi֬c)mX=^Wʓ(*cKeq^zyZ*:@w0㢇)_]?|vlIyJ;45 71:l.=cS(Cb*Y58%D<:TD$S*o=T5 L۾CӶ7;.tB]j;vUCzPaF>vb5tz7HԇU^g@& -iO{&3oʍ1j6*37A^s^P Ig06Y: ih\fojHNkͣ$ x+ X5Y)n3N -aBx̞?1"^ ȋ!# -ԡ{#U588)[IǠ_7X)n cMt##*) 6iۋۂGb*kԻQ ->+9 ג+H\o;.7`+He 'mg>".V7!=ql7ξһ>Y@P\(I1:9>Is ~ϊWuSŪ|a+₥K? 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P.~D'Ambra, D.~di~Serafino, S.~Filippone, \emph{MLD2P4: a Package of Parallel Multilevel Algebraic Domain Decomposition Preconditioners -in Fortran 95}, ICAR-CNR Technical Report RT-ICAR-NA-09-01, 2009. +in Fortran 95}, ACM Trans. Math. Softw., 37(3), 2010. % \bibitem{UMFPACK} T.A.~Davis, @@ -124,8 +124,15 @@ BIT Numerical Mathematics, 43, 2003, 945--959. % \bibitem{PSBLASGUIDE} S.~Filippone, A.~Buttari, -{\em PSBLAS-2.3 User's Guide. A Reference Guide for the Parallel Sparse BLAS Library}, 2008, +{\em PSBLAS-3.0 User's Guide. A Reference Guide for the Parallel Sparse BLAS Library}, 2012, available from \texttt{http://www.ce.uniroma2.it/psblas/}. + +\bibitem{PSBLAS3} +Salvatore Filippone and Alfredo Buttari. +{\em {Object-Oriented Techniques for Sparse Matrix Computations in Fortran + 2003}.} +ACM Trans. on Math Software, 38(4), 2012. + % \bibitem{psblas_00} S.~Filippone, M.~Colajanni, diff --git a/docs/src/license.tex b/docs/src/license.tex index bca9e4d7..9591ddf2 100644 --- a/docs/src/license.tex +++ b/docs/src/license.tex @@ -5,40 +5,43 @@ The MLD2P4 is freely distributable under the following copyright terms: {\small \begin{verbatim} - MLD2P4 version 1.1 -MultiLevel Domain Decomposition Parallel Preconditioners Package - based on PSBLAS (Parallel Sparse BLAS version 2.3.1) -(C) Copyright 2008, 2009 + + MLD2P4 version 2.0 + MultiLevel Domain Decomposition Parallel Preconditioners Package + based on PSBLAS (Parallel Sparse BLAS version 3.0) + + (C) Copyright 2008,2009,2010, 2010 - Salvatore Filippone University of Rome Tor Vergata - Alfredo Buttari University of Rome Tor Vergata - Pasqua D'Ambra ICAR-CNR, Naples - Daniela di Serafino Second University of Naples + Salvatore Filippone University of Rome Tor Vergata + Alfredo Buttari CNRS-IRIT, Toulouse + Pasqua D'Ambra ICAR-CNR, Naples + Daniela di Serafino Second University of Naples - -Redistribution and use in source and binary forms, with or without -modification, are permitted provided that the following conditions -are met: - 1. Redistributions of source code must retain the above copyright - notice, this list of conditions and the following disclaimer. - 2. Redistributions in binary form must reproduce the above copyright - notice, this list of conditions, and the following disclaimer in the - documentation and/or other materials provided with the distribution. - 3. The name of the MLD2P4 group or the names of its contributors may - not be used to endorse or promote products derived from this - software without specific written permission. - -THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS -``AS IS'' AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED -TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR -PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE MLD2P4 GROUP OR ITS CONTRIBUTORS -BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR -CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF -SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS -INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN -CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) -ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE -POSSIBILITY OF SUCH DAMAGE. + + Redistribution and use in source and binary forms, with or without + modification, are permitted provided that the following conditions + are met: + 1. Redistributions of source code must retain the above copyright + notice, this list of conditions and the following disclaimer. + 2. Redistributions in binary form must reproduce the above copyright + notice, this list of conditions, and the following disclaimer in the + documentation and/or other materials provided with the distribution. + 3. The name of the MLD2P4 group or the names of its contributors may + not be used to endorse or promote products derived from this + software without specific written permission. + + THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS + ``AS IS'' AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED + TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR + PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE MLD2P4 GROUP OR ITS CONTRIBUTORS + BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR + CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF + SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS + INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN + CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) + ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE + POSSIBILITY OF SUCH DAMAGE. + \end{verbatim} } diff --git a/docs/src/overview.tex b/docs/src/overview.tex index 1d7e2e57..2094765e 100644 --- a/docs/src/overview.tex +++ b/docs/src/overview.tex @@ -9,7 +9,8 @@ to be used in the iterative solutions of sparse linear systems: Ax=b, \label{system1} \end{equation} -where $A$ is a square, real or complex, sparse matrix with a symmetric sparsity pattern. +where $A$ is a square, real or complex, sparse matrix with a symmetric +sparsity pattern. % %\textbf{NOTA: Caso non simmetrico, aggregazione con $(A+A^T)$ fatta! %Dovremmo implementare uno smoothed prolongator @@ -28,21 +29,22 @@ discretization of a PDE). The \emph{smoothed aggregation} technique is applied as algebraic coarsening strategy~\cite{BREZINA_VANEK,VANEK_MANDEL_BREZINA}. \end{itemize} -The package is written in \emph{Fortran~95}, following an -\emph{object-oriented approach} through the exploitation of features -such as abstract data type creation, functional -overloading and dynamic memory management. +Version 2.0 of the package is written in \emph{Fortran~2003}, following an +\emph{object-oriented design} through the exploitation of features +such as abstract data type creation, functional overloading and +dynamic memory management. % , while providing a smooth % path towards the integration in legacy application codes. -The parallel implementation is based -on a Single Program Multiple Data (SPMD) paradigm for distributed-memory architectures. -Single and double precision implementations of MLD2P4 are available for both the -real and the complex case, that can be used through a single interface. +The parallel implementation is based on a Single Program Multiple Data +(SPMD) paradigm for distributed-memory architectures. Single and +double precision implementations of MLD2P4 are available for both the +real and the complex case, that can be used through a single +interface. -MLD2P4 has been designed to implement scalable and easy-to-use multilevel preconditioners -in the context of the \emph{PSBLAS (Parallel Sparse BLAS) -computational framework}~\cite{psblas_00}. +MLD2P4 has been designed to implement scalable and easy-to-use +multilevel preconditioners in the context of the \emph{PSBLAS + (Parallel Sparse BLAS) computational framework}~\cite{psblas_00,PSBLAS3}. PSBLAS is a library originally developed to address the parallel implementation of iterative solvers for sparse linear system, by providing basic linear algebra operators and data management facilities for distributed sparse matrices; it @@ -54,7 +56,7 @@ parallel sparse linear algebra kernels, to pursue goals such as performance, portability, modularity ed extensibility in the development of the preconditioner package. On the other hand, the implementation of MLD2P4 has led to some revisions and extentions of the PSBLAS kernels, leading to the -recent PSBLAS 2.0 version~\cite{PSBLASGUIDE}. The inter-process comunication required + PSBLAS 2.0 version~\cite{PSBLASGUIDE}. The inter-process comunication required by MLD2P4 is encapsulated into the PSBLAS routines, except few cases where MPI~\cite{MPI1} is explicitly called. Therefore, MLD2P4 can be run on any parallel machine where PSBLAS and MPI implementations are available. @@ -72,6 +74,12 @@ We provide here a description of the upper-layer routines, but not of the medium-layer ones.%% For a detailed description of the overall software architecture %% of MLD2P4 the reader is referred to~\cite{MLD2P4_TOMS}. +The user interface of version 2.0 is essentially identical to that of +version 1.1; the internal implementation however has been changed a +lot, and it has become much easier to extend the library by adding new +smoothers and/or solvers, thanks to the Fortran~2003 features +exploited in the design of PSBLAS~3.0. + This guide is organized as follows. General information on the distribution of the source code is reported in Section~\ref{sec:distribution}, while details on the configuration and installation of the package are given in Section~\ref{sec:building}. A description of @@ -79,7 +87,7 @@ multi-level Schwarz preconditioners based on smoothed aggregation is provided in Section~\ref{sec:background}, to help the users in choosing among the different preconditioners implemented in MLD2P4. The basics for building and applying the preconditioners with the Krylov solvers implemented in PSBLAS are reported in Section~\ref{sec:started}, where the -Fortran 95 codes of a few sample programs are also shown. A reference guide for +Fortran codes of a few sample programs are also shown. A reference guide for the upper-layer routines of MLD2P4, that are the user interface, is provided in Section~\ref{sec:userinterface}. The error handling mechanism used by the package is briefly described in Section~\ref{sec:errors}. The copyright terms concerning the distribution and modification diff --git a/docs/src/userguide.tex b/docs/src/userguide.tex index 53f698d2..2afd30f5 100644 --- a/docs/src/userguide.tex +++ b/docs/src/userguide.tex @@ -127,7 +127,7 @@ based on PSBLAS} \flushright \large Software version: 2.0-beta\\ %\today -\large March 20, 2012 +\large October 31, 2012 \end{minipage}} %\addtolength{\textwidth}{\centeroffset} \vspace{\stretch{2}} diff --git a/docs/src/userhtml.tex b/docs/src/userhtml.tex index f5aeb0a3..8ee9c0d4 100644 --- a/docs/src/userhtml.tex +++ b/docs/src/userhtml.tex @@ -104,7 +104,7 @@ based on PSBLAS}\\[3ex] %\today Software version: 2.0-beta\\ %\today -March 20,2012 +October 31, 2012 \clearpage \ \\ \thispagestyle{empty}