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psblas3/README

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*
* Parallel Sparse BLAS v2.0
* (C) Copyright 2006 Salvatore Filippone University of Rome Tor Vergata
* Alfredo Buttari
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions
* are met:
* 1. Redistributions of source code must retain the above copyright
* notice, this list of conditions and the following disclaimer.
* 2. Redistributions in binary form must reproduce the above copyright
* notice, this list of conditions, and the following disclaimer in the
* documentation and/or other materials provided with the distribution.
* 3. The name of the PSBLAS group or the names of its contributors may
* not be used to endorse or promote products derived from this
* software without specific written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
* ``AS IS'' AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED
* TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
* PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE PSBLAS GROUP OR ITS CONTRIBUTORS
* BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
* CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
* SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
* INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
* CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
* ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
* POSSIBILITY OF SUCH DAMAGE.
*
*
This directory contains the PSBLAS library, version 2.0.
The version 1.0 of the library is described in:
20 years ago
S. Filippone, M. Colajanni
PSBLAS: A library for parallel linear algebra computation on sparse matrices
ACM Trans. on Math. Software, 26(4), Dec. 2000, pp. 527-550.
PLATFORMS:
For the F77 compiler, we assume it supports DOUBLE COMPLEX and DO WHILE/ENDDO.
Practically all compilers do nowadays.
The compilation process relies on the choice of an appropriate
Make.inc file; we have tested with AIX XLF, Intel ifc/Linux, Lahey
F95/Linux, Nag f95/Linux, GNU Fortran/Linux. If you succeed in compiling with
other compiler/operating systems please let us know.
20 years ago
IBM SP2.
The library has been tested on an IBM SP2 with XLC and XLF
compilers, and a version of the BLACS based on MPI.
The rather baroque setting
F90=xlf90 -qsuffix=f=f90
in Make.inc.rs6k takes care of the f90 extension.
WARNING: xlf 8.1 introduced a performance bug, whereas a Fortan 90
code calling a Fortan 77 code would incur spurious array copies;
please make sure your system has the PTF xlf 8102 installed.
LINUX:
There finally exist a GNU Fortran 95 implementation: we are using the
development snapshots from GCC 3.5.0, later 4.1 and 4.2 since July
2004, and it appears to work. The 4.2 version of GNU compilers is now
our reference platform.
20 years ago
Vast F90/Linux is now obsolete, in that we have a NULL()
initialization for pointers that is outside strict F90.
20 years ago
For the PGI compilers, we used them in conjunction with gcc, NOT
pgcc. Note that with pgi 3.6 we have horrible performance, due to
spurious array copies when calling Fortran 77 codes from Fortran 90;
this is fixed in version 4 and later.
20 years ago
The Lahey version we got access to (6.0 and 6.1) seems to suffer from
the same extra copies problem; this is most apparent in the matrix
build process.
For the Intel compilers, we used ifc versions 7, 8 and 9; with version 6.0
20 years ago
you need to change the way modules are handled, but we recommend to migrate
to the new version anyway. Moreover, with versions prior to 7.1, there
is a strange error in pargen/ppde90: the compiler did not like the
INTERFACE for the dummy argument subroutine PARTS, it wanted an
EXTERNAL specification. Again, please move to 7.1.
Testing of NAG f95 versions is still incomplete.
DOCUMENTATION
See userguidef90.ps.
Please consult the sample programs, especially TEST/pargen/ppde90.f90.
OTHER SOFTWARE CREDITS
We include our modified implementation of some of the Sparker (serial
sparse BLAS) material, e.g. Jagged diagonal, plus a number of
extensions of our own design. The original file spblas.f can be
downloaded from matisa.cc.rl.ac.uk; of course any bugs in our
implementation are our own to fix. The main reference for the serial
sparse BLAS is:
Duff, I., Marrone, M., Radicati, G., and Vittoli, C.
Level 3 basic linear algebra subprograms for sparse matrices: a user
level interface
ACM Trans. Math. Softw., 23(3), 379-401, 1997.
We have had good results with the METIS library, which can be
obtained from
http://www-users.cs.umn.edu/~karypis/metis/metis/main.html
We include interfaces to:
-- SuperLU 3.0 http://crd.lbl.gov/~xiaoye/SuperLU/
-- UMFPACK 4.4 http://www.cise.ufl.edu/research/sparse/umfpack/
20 years ago
The PSBLAS team.
Credits for version 2.0:
20 years ago
Salvatore Filippone
Alfredo Buttari
The MPcube preconditioners were developed with the contribution of:
Pasqua D'Ambra
Daniela Di Serafino
Credits for version 1.0:
Salvatore Filippone
Michele Colajanni
20 years ago
Fabio Cerioni
Stefano Maiolatesi
Dario Pascucci