/*----------------------------------------------------------------------------------*/ /* Parallel Sparse BLAS v 3.5.0 */ /* (C) Copyright 2017 Salvatore Filippone */ /* */ /* Redistribution and use in source and binary forms, with or without */ /* modification, are permitted provided that the following conditions */ /* are met: */ /* 1. Redistributions of source code must retain the above copyright */ /* notice, this list of conditions and the following disclaimer. */ /* 2. Redistributions in binary form must reproduce the above copyright */ /* notice, this list of conditions, and the following disclaimer in the */ /* documentation and/or other materials provided with the distribution. */ /* 3. The name of the PSBLAS group or the names of its contributors may */ /* not be used to endorse or promote products derived from this */ /* software without specific written permission. */ /* */ /* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS */ /* ``AS IS'' AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED */ /* TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR */ /* PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE PSBLAS GROUP OR ITS CONTRIBUTORS */ /* BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR */ /* CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF */ /* SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS */ /* INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN */ /* CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) */ /* ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE */ /* POSSIBILITY OF SUCH DAMAGE. */ /* */ /* */ /* File: pdegen3dc.c */ /* */ /* Program: pdegen3dc */ /* This sample program shows how to build and solve a sparse linear */ /* */ /* The program solves a linear system based on the partial differential */ /* equation */ /* */ /* */ /* */ /* The equation generated is */ /* */ /* b1 d d (u) b2 d d (u) a1 d (u)) a2 d (u))) */ /* - ------ - ------ + ----- + ------ + a3 u = 0 */ /* dx dx dy dy dx dy */ /* */ /* */ /* with Dirichlet boundary conditions on the unit cube */ /* */ /* 0<=x,y,z<=1 */ /* */ /* The equation is discretized with finite differences and uniform stepsize; */ /* the resulting discrete equation is */ /* */ /* ( u(x,y,z)(2b1+2b2+a1+a2)+u(x-1,y)(-b1-a1)+u(x,y-1)(-b2-a2)+ */ /* -u(x+1,y)b1-u(x,y+1)b2)*(1/h**2) */ /* */ /* Example adapted from: C.T.Kelley */ /* Iterative Methods for Linear and Nonlinear Equations */ /* SIAM 1995 */ /* */ /* */ /* In this sample program the index space of the discretized */ /* computational domain is first numbered sequentially in a standard way, */ /* then the corresponding vector is distributed according to an HPF BLOCK */ /* distribution directive. The discretization ensures there are IDIM */ /* *internal* points in each direction. */ /* */ /*----------------------------------------------------------------------------------*/ #include #include #include #include #include "psb_base_cbind.h" #include "psb_prec_cbind.h" #include "psb_linsolve_cbind.h" #define LINEBUFSIZE 1024 #define NBMAX 20 #define DUMPMATRIX 0 double a1(double x, double y, double z) { return (1.0 / 80.0); } double a2(double x, double y, double z) { return (1.0 / 80.0); } double a3(double x, double y, double z) { return (1.0 / 80.0); } double c(double x, double y, double z) { return (0.0); } double b1(double x, double y, double z) { return (0.0 / sqrt(3.0)); } double b2(double x, double y, double z) { return (0.0 / sqrt(3.0)); } double b3(double x, double y, double z) { return (0.0 / sqrt(3.0)); } double g(double x, double y, double z) { if (x == 1.0) { return (1.0); } else if (x == 0.0) { return (exp(-y * y - z * z)); } else { return (0.0); } } psb_i_t matgen(psb_c_ctxt cctxt, psb_i_t nl, psb_i_t idim, psb_l_t vl[], psb_c_dspmat *ah, const char *afmt, psb_c_descriptor *cdh, const char *cdfmt, psb_c_dvector *xh, psb_c_dvector *bh, psb_c_dvector *rh) { psb_i_t iam, np; psb_l_t ix, iy, iz, el, glob_row; psb_i_t i, k, info, ret; double x, y, z, deltah, sqdeltah, deltah2; double val[10 * NBMAX], zt[NBMAX]; psb_l_t irow[10 * NBMAX], icol[10 * NBMAX]; info = 0; psb_c_info(cctxt, &iam, &np); deltah = (double)1.0 / (idim + 1); sqdeltah = deltah * deltah; deltah2 = 2.0 * deltah; psb_c_set_index_base(0); for (i = 0; i < nl; i++) { glob_row = vl[i]; // if ((i%100000 == 0)||(i<10)) fprintf(stderr,"%d: generation loop at %d %ld \n",iam,i,glob_row); el = 0; ix = glob_row / (idim * idim); iy = (glob_row - ix * idim * idim) / idim; iz = glob_row - ix * idim * idim - iy * idim; x = (ix + 1) * deltah; y = (iy + 1) * deltah; z = (iz + 1) * deltah; zt[0] = 0.0; /* internal point: build discretization */ /* term depending on (x-1,y,z) */ val[el] = -a1(x, y, z) / sqdeltah - b1(x, y, z) / deltah2; if (ix == 0) { zt[0] += g(0.0, y, z) * (-val[el]); } else { icol[el] = (ix - 1) * idim * idim + (iy)*idim + (iz); el = el + 1; } /* term depending on (x,y-1,z) */ val[el] = -a2(x, y, z) / sqdeltah - b2(x, y, z) / deltah2; if (iy == 0) { zt[0] += g(x, 0.0, z) * (-val[el]); } else { icol[el] = (ix)*idim * idim + (iy - 1) * idim + (iz); el = el + 1; } /* term depending on (x,y,z-1)*/ val[el] = -a3(x, y, z) / sqdeltah - b3(x, y, z) / deltah2; if (iz == 0) { zt[0] += g(x, y, 0.0) * (-val[el]); } else { icol[el] = (ix)*idim * idim + (iy)*idim + (iz - 1); el = el + 1; } /* term depending on (x,y,z)*/ val[el] = 2.0 * (a1(x, y, z) + a2(x, y, z) + a3(x, y, z)) / sqdeltah + c(x, y, z); icol[el] = (ix)*idim * idim + (iy)*idim + (iz); el = el + 1; /* term depending on (x,y,z+1) */ val[el] = -a3(x, y, z) / sqdeltah + b3(x, y, z) / deltah2; if (iz == idim - 1) { zt[0] += g(x, y, 1.0) * (-val[el]); } else { icol[el] = (ix)*idim * idim + (iy)*idim + (iz + 1); el = el + 1; } /* term depending on (x,y+1,z) */ val[el] = -a2(x, y, z) / sqdeltah + b2(x, y, z) / deltah2; if (iy == idim - 1) { zt[0] += g(x, 1.0, z) * (-val[el]); } else { icol[el] = (ix)*idim * idim + (iy + 1) * idim + (iz); el = el + 1; } /* term depending on (x+1,y,z) */ val[el] = -a1(x, y, z) / sqdeltah + b1(x, y, z) / deltah2; if (ix == idim - 1) { zt[0] += g(1.0, y, z) * (-val[el]); } else { icol[el] = (ix + 1) * idim * idim + (iy)*idim + (iz); el = el + 1; } for (k = 0; k < el; k++) irow[k] = glob_row; if ((ret = psb_c_dspins(el, irow, icol, val, ah, cdh)) != 0) fprintf(stderr, "From psb_c_dspins: %d\n", ret); irow[0] = glob_row; psb_c_dgeins(1, irow, zt, bh, cdh); zt[0] = 0.0; psb_c_dgeins(1, irow, zt, xh, cdh); } #ifdef PSB_HAVE_CUDA info = psb_c_cdasb_format(cdh, cdfmt); if (info != 0) return (info); info = psb_c_dspasb_opt(ah, cdh, afmt, PSB_UPD_DFLT, PSB_DUPL_DEF); if (info != 0) return (info); info = psb_c_dgeasb_options_format(xh, cdh, PSB_DUPL_ADD, cdfmt); if (info != 0) return (info); info = psb_c_dgeasb_options_format(bh, cdh, PSB_DUPL_ADD, cdfmt); if (info != 0) return (info); info = psb_c_dgeasb_options_format(rh, cdh, PSB_DUPL_ADD, cdfmt); if (info != 0) return (info); #else if ((info = psb_c_cdasb(cdh)) != 0) return (info); if ((info = psb_c_dspasb(ah, cdh)) != 0) return (info); if ((info = psb_c_dgeasb(xh, cdh)) != 0) return (info); if ((info = psb_c_dgeasb(bh, cdh)) != 0) return (info); if ((info = psb_c_dgeasb(rh, cdh)) != 0) return (info); #endif return (info); } int main(int argc, char *argv[]) { psb_c_ctxt *cctxt; psb_i_t iam, np; char methd[40], ptype[20], afmt[8], cdfmt[8], buffer[LINEBUFSIZE + 1]; psb_i_t nparms; psb_i_t idim, info, istop, itmax, itrace, irst, iter, ret; psb_c_dprec *ph; psb_c_dspmat *ah; psb_c_dvector *bh, *xh, *rh; psb_i_t nb, nlr, nl; psb_l_t i, ng, *vl, k; double t1, t2, eps, err; double *xv, *bv, *rv; double one = 1.0, zero = 0.0, res2; psb_c_SolverOptions options; psb_c_descriptor *cdh; FILE *vectfile; cctxt = psb_c_new_ctxt(); psb_c_init(cctxt); #ifdef PSB_HAVE_CUDA psb_c_cuda_init(cctxt); #endif psb_c_info(*cctxt, &iam, &np); #ifdef PSB_HAVE_CUDA if (iam == 0) printf("Example compiled with GPU support.\n"); #endif psb_c_barrier(*cctxt); if (iam == 0) { fgets(buffer, LINEBUFSIZE, stdin); sscanf(buffer, "%d ", &nparms); fgets(buffer, LINEBUFSIZE, stdin); sscanf(buffer, "%s", methd); fgets(buffer, LINEBUFSIZE, stdin); sscanf(buffer, "%s", ptype); fgets(buffer, LINEBUFSIZE, stdin); sscanf(buffer, "%s", afmt); fgets(buffer, LINEBUFSIZE, stdin); sscanf(buffer, "%s", cdfmt); fgets(buffer, LINEBUFSIZE, stdin); sscanf(buffer, "%d", &idim); fgets(buffer, LINEBUFSIZE, stdin); sscanf(buffer, "%d", &istop); fgets(buffer, LINEBUFSIZE, stdin); sscanf(buffer, "%d", &itmax); fgets(buffer, LINEBUFSIZE, stdin); sscanf(buffer, "%d", &itrace); fgets(buffer, LINEBUFSIZE, stdin); sscanf(buffer, "%d", &irst); /* Echo input parameters */ printf("Number of processes: %d\n", np); printf("Number of parameters read: %d\n", nparms); printf("Krylov method: %s\n", methd); printf("Preconditioner type: %s\n", ptype); printf("Sparse matrix format: %s\n", afmt); printf("Descriptor format: %s\n", cdfmt); printf("Problem dimension (internal points per direction): %d\n", idim); printf("Stopping criterion (1:backward error 2: ||r||_2/||b||_2): %d\n", istop); printf("Maximum number of iterations: %d\n", itmax); printf("Info message frequency (every itrace iterations): %d\n", itrace); printf("Restart depth for RGMRES or BiCGSTAB(L): %d\n", irst); } /* Now broadcast the values, and check they're OK */ psb_c_ibcast(*cctxt, 1, &nparms, 0); psb_c_hbcast(*cctxt, methd, 0); psb_c_hbcast(*cctxt, ptype, 0); psb_c_hbcast(*cctxt, afmt, 0); psb_c_hbcast(*cctxt, cdfmt, 0); psb_c_ibcast(*cctxt, 1, &idim, 0); psb_c_ibcast(*cctxt, 1, &istop, 0); psb_c_ibcast(*cctxt, 1, &itmax, 0); psb_c_ibcast(*cctxt, 1, &itrace, 0); psb_c_ibcast(*cctxt, 1, &irst, 0); fflush(stderr); psb_c_barrier(*cctxt); cdh = psb_c_new_descriptor(); psb_c_set_index_base(0); /* Simple minded BLOCK data distribution */ ng = ((psb_l_t)idim) * idim * idim; nb = (ng + np - 1) / np; nl = nb; if ((ng - iam * nb) < nl) nl = ng - iam * nb; if ((vl = malloc(nb * sizeof(psb_l_t))) == NULL) { fprintf(stderr, "On %d: malloc failure\n", iam); psb_c_abort(*cctxt); } i = ((psb_l_t)iam) * nb; for (k = 0; k < nl; k++) vl[k] = i + k; if ((info = psb_c_cdall_vl(nl, vl, *cctxt, cdh)) != 0) { fprintf(stderr, "From cdall: %d\nBailing out\n", info); psb_c_abort(*cctxt); } bh = psb_c_new_dvector(); xh = psb_c_new_dvector(); rh = psb_c_new_dvector(); ah = psb_c_new_dspmat(); // fprintf(stderr,"From psb_c_new_dspmat: %p\n",ah); /* Allocate mem space for sparse matrix and vectors */ ret = psb_c_dspall(ah, cdh); // fprintf(stderr,"From psb_c_dspall: %d\n",ret); psb_c_dgeall(bh, cdh); psb_c_dgeall(xh, cdh); psb_c_dgeall(rh, cdh); /* Matrix generation */ if (matgen(*cctxt, nl, idim, vl, ah, afmt, cdh, cdfmt, xh, bh, rh) != 0) { fprintf(stderr, "Error during matrix build loop\n"); psb_c_abort(*cctxt); } psb_c_barrier(*cctxt); /* Set up the preconditioner */ ph = psb_c_new_dprec(); psb_c_dprecinit(*cctxt, ph, ptype); ret = psb_c_dprecbld(ah, cdh, ph); // fprintf(stderr,"From psb_c_dprecbld: %d\n",ret); /* Set up the solver options */ psb_c_DefaultSolverOptions(&options); options.eps = 1.e-9; options.itmax = itmax; options.irst = irst; options.itrace = 1; options.istop = istop; psb_c_seterraction_ret(); t1 = psb_c_wtime(); ret = psb_c_dkrylov(methd, ah, ph, bh, xh, cdh, &options); t2 = psb_c_wtime(); iter = options.iter; err = options.err; // fprintf(stderr,"From krylov: %d %lf, %d %d\n",iter,err,ret,psb_c_get_errstatus()); if (psb_c_get_errstatus() != 0) { psb_c_print_errmsg(); } // fprintf(stderr,"After cleanup %d\n",psb_c_get_errstatus()); /* Check 2-norm of residual on exit */ psb_c_dgeaxpby(one, bh, zero, rh, cdh); psb_c_dspmm(-one, ah, xh, one, rh, cdh); res2 = psb_c_dgenrm2(rh, cdh); if (iam == 0) { fprintf(stdout, "Time: %lf\n", (t2 - t1)); fprintf(stdout, "Iter: %d\n", iter); fprintf(stdout, "Err: %lg\n", err); fprintf(stdout, "||r||_2: %lg\n", res2); } #if DUMPATRIX psb_c_dmat_name_print(ah, "cbindmat.mtx"); nlr = psb_c_cd_get_local_rows(cdh); bv = psb_c_dvect_get_cpy(bh); vectfile = fopen("cbindb.mtx", "w"); for (i = 0; i < nlr; i++) fprintf(vectfile, "%lf\n", bv[i]); fclose(vectfile); xv = psb_c_dvect_get_cpy(xh); nlr = psb_c_cd_get_local_rows(cdh); for (i = 0; i < nlr; i++) fprintf(stdout, "SOL: %d %d %lf\n", iam, i, xv[i]); rv = psb_c_dvect_get_cpy(rh); nlr = psb_c_cd_get_local_rows(cdh); for (i = 0; i < nlr; i++) fprintf(stdout, "RES: %d %d %lf\n", iam, i, rv[i]); #endif /* Clean up memory */ if ((info = psb_c_dprecfree(ph)) != 0) { fprintf(stderr, "From dprecfree: %d\nBailing out\n", info); psb_c_abort(*cctxt); } if ((info = psb_c_dgefree(xh, cdh)) != 0) { fprintf(stderr, "From dgefree: %d\nBailing out\n", info); psb_c_abort(*cctxt); } if ((info = psb_c_dgefree(bh, cdh)) != 0) { fprintf(stderr, "From dgefree: %d\nBailing out\n", info); psb_c_abort(*cctxt); } if ((info = psb_c_dgefree(rh, cdh)) != 0) { fprintf(stderr, "From dgefree: %d\nBailing out\n", info); psb_c_abort(*cctxt); } if ((info = psb_c_dspfree(ah, cdh)) != 0) { fprintf(stderr, "From dspfree: %d\nBailing out\n", info); psb_c_abort(*cctxt); } if ((info = psb_c_cdfree(cdh)) != 0) { fprintf(stderr, "From cdfree: %d\nBailing out\n", info); psb_c_abort(*cctxt); } // fprintf(stderr,"pointer from cdfree: %p\n",cdh->descriptor); /* Clean up object handles */ free(ph); free(xh); free(bh); free(rh); free(ah); free(cdh); /* further cleanup */ free(vl); // if (iam == 0) fprintf(stderr,"program completed successfully\n"); psb_c_barrier(*cctxt); #ifdef PSB_HAVE_CUDA psb_c_cuda_exit(); #endif /* Finalize PSBLAS context */ psb_c_exit(*cctxt); free(cctxt); }