asd-2024/001.log

⠖ estimating line count                                                                                                                          
skipped 2418 lines of type: P
Number of entries: 8347110
Computing graph stats...
Computing nodes degrees...
Computing histogram...
Stats:
- Nodes: 3460855
- Edges: 3459968
Graph degrees histogram (degree/count):
- 1: 2123
- 2: 2017235
- 3: 280142
- 4: 1047601
- 5: 69572
- 6: 20940
- 7: 8895
- 8: 4709
- 9: 2768
- 10: 1740
- 11: 1140
- 12: 873
- 13: 644
- 14: 436
- 15: 339
- 16: 267
- 17: 210
- 18: 183
- 19: 127
- 20: 100
- 21: 97
- 22: 77
- 23: 55
- 24: 48
- 25: 48
- 26: 28
- 27: 33
- 28: 32
- 29: 39
- 30: 29
- 31: 19
- 32: 18
- 33: 17
- 34: 8
- 35: 15
- 36: 7
- 37: 12
- 38: 14
- 39: 10
- 40: 8
- 41: 6
- 42: 8
- 43: 8
- 44: 6
- 45: 10
- 46: 5
- 47: 5
- 48: 6
- 49: 5
- 50: 9
- 51: 2
- 52: 6
- 53: 3
- 54: 4
- 55: 2
- 56: 1
- 57: 8
- 58: 1
- 59: 3
- 60: 3
- 61: 1
- 62: 1
- 63: 5
- 64: 1
- 65: 3
- 66: 1
- 67: 6
- 68: 2
- 69: 1
- 71: 3
- 72: 3
- 73: 2
- 74: 2
- 75: 1
- 78: 1
- 79: 1
- 80: 2
- 81: 1
- 83: 1
- 84: 2
- 85: 2
- 87: 2
- 90: 1
- 91: 1
- 93: 1
- 96: 2
- 97: 3
- 99: 1
- 100: 1
- 101: 2
- 105: 2
- 108: 1
- 110: 1
- 112: 1
- 115: 2
- 116: 1
- 118: 1
- 119: 2
- 126: 1
- 127: 1
- 130: 1
- 131: 1
- 132: 1
- 135: 1
- 136: 1
- 142: 1
- 143: 1
- 150: 1
- 151: 2
- 164: 1
- 165: 1
- 168: 2
- 176: 1
- 183: 1
- 186: 1
- 197: 1
- 206: 1
- 208: 1
- 211: 1
- 229: 1
- 235: 1
- 269: 1
- 310: 1
- 439: 1
- 454: 1
Computing edge types...
Computing edge types histogram...
Edge types histogram (type/count):
- TreeEdge: 3459280
- BackEdge: 33402
- ForwardEdge: 352745
- CrossEdge: 1041433
Removing back edges...
Computing edge types...
Computing edge types histogram...
Edge types histogram (type/count):
- TreeEdge: 3459280
- ForwardEdge: 352745
- CrossEdge: 1041433
Computing connected components...
Computing sizes histogram...
Connected components histogram (size/count):
- 2: 531
- 3: 1
- 4: 2
- 8: 1
- 92: 1
- 135: 1
- 293: 1
- 305: 1
- 2286: 1
- 5040: 1
- 5639: 1
- 9714: 1
- 12885: 1
- 30694: 1
- 40082: 1
- 50661: 1
- 58959: 1
- 101785: 1
- 149495: 1
- 160235: 1
- 518148: 1
- 951466: 1
- 1361860: 1
Picking largest connected component...
Computing graph stats...
Computing nodes degrees...
Computing histogram...
Stats:
- Nodes: 1361860
- Edges: 1361860
Graph degrees histogram (degree/count):
- 2: 2547
- 4: 790748
- 6: 124055
- 8: 397684
- 10: 29479
- 12: 8481
- 14: 3512
- 16: 1819
- 18: 1032
- 20: 666
- 22: 448
- 24: 346
- 26: 207
- 28: 167
- 30: 139
- 32: 92
- 34: 81
- 36: 58
- 38: 44
- 40: 35
- 42: 29
- 44: 28
- 46: 24
- 48: 24
- 50: 11
- 52: 4
- 54: 13
- 56: 9
- 58: 13
- 60: 5
- 62: 4
- 64: 2
- 66: 3
- 68: 5
- 70: 2
- 72: 4
- 74: 1
- 76: 1
- 78: 1
- 80: 1
- 82: 1
- 84: 1
- 86: 5
- 88: 4
- 90: 2
- 94: 1
- 100: 1
- 104: 1
- 108: 2
- 114: 1
- 128: 1
- 134: 1
- 144: 1
- 146: 1
- 156: 1
- 166: 1
- 192: 1
- 198: 1
- 200: 1
- 218: 1
- 230: 1
- 238: 1
- 258: 1
- 298: 1
- 326: 1
- 364: 1
- 470: 1
Compacting chains...
Compacted 121 nodes
Computing graph stats...
Computing nodes degrees...
Computing histogram...
Stats:
- Nodes: 1361739
- Edges: 1361739
Graph degrees histogram (degree/count):
- 2: 2547
- 4: 790627
- 6: 124055
- 8: 397684
- 10: 29479
- 12: 8481
- 14: 3512
- 16: 1819
- 18: 1032
- 20: 666
- 22: 448
- 24: 346
- 26: 207
- 28: 167
- 30: 139
- 32: 92
- 34: 81
- 36: 58
- 38: 44
- 40: 35
- 42: 29
- 44: 28
- 46: 24
- 48: 24
- 50: 11
- 52: 4
- 54: 13
- 56: 9
- 58: 13
- 60: 5
- 62: 4
- 64: 2
- 66: 3
- 68: 5
- 70: 2
- 72: 4
- 74: 1
- 76: 1
- 78: 1
- 80: 1
- 82: 1
- 84: 1
- 86: 5
- 88: 4
- 90: 2
- 94: 1
- 100: 1
- 104: 1
- 108: 2
- 114: 1
- 128: 1
- 134: 1
- 144: 1
- 146: 1
- 156: 1
- 166: 1
- 192: 1
- 198: 1
- 200: 1
- 218: 1
- 230: 1
- 238: 1
- 258: 1
- 298: 1
- 326: 1
- 364: 1
- 470: 1
Computing edge types...
Computing edge types histogram...
Edge types histogram (type/count):
- TreeEdge: 1361738
- BackEdge: 1914594
- ForwardEdge: 552856
Cleaning up...
cargo run --release -- show -i dataset/chrX.hprc-v1.0-pggb.local.gfa  142.91s user 16.48s system 96% cpu 2:45.14 total