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https://github.com/sfilippone/amg4psblas.git
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Fixed race condition in processExposedVertices
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@@ -32,14 +32,14 @@ void PARALLEL_PROCESS_EXPOSED_VERTEX_B(MilanLongInt NLVer,
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{
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MilanLongInt v = -1, k = -1, w = -1, adj11 = 0, adj12 = 0, k1 = 0;
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MilanInt ghostOwner = 0;
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MilanInt ghostOwner = 0, option;
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#pragma omp parallel private(k, w, v, k1, adj11, adj12, ghostOwner) firstprivate(privateU, StartIndex, EndIndex, privateQLocalVtx, privateQGhostVtx, privateQMsgType, privateQOwner) default(shared) num_threads(NUM_THREAD)
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#pragma omp parallel private(option, k, w, v, k1, adj11, adj12, ghostOwner) firstprivate(privateU, StartIndex, EndIndex, privateQLocalVtx, privateQGhostVtx, privateQMsgType, privateQOwner) default(shared) num_threads(NUM_THREAD)
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{
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#pragma omp for reduction(+ \
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: PCounter[:numProcs]) schedule(static)
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#pragma omp for reduction(+ : PCounter[:numProcs]) schedule(static)
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for (v = 0; v < NLVer; v++)
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{
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option = -1;
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// Start: PARALLEL_PROCESS_EXPOSED_VERTEX_B(v)
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k = candidateMate[v];
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candidateMate[v] = verLocInd[k];
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@@ -58,29 +58,75 @@ void PARALLEL_PROCESS_EXPOSED_VERTEX_B(MilanLongInt NLVer,
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if (w >= 0)
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{
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if (isAlreadyMatched(verLocInd[k], StartIndex, EndIndex, GMate, Mate, Ghost2LocalMap))
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#pragma omp critical(processExposed)
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{
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w = computeCandidateMate(verLocPtr[v],
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verLocPtr[v + 1],
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edgeLocWeight, 0,
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verLocInd,
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StartIndex,
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EndIndex,
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GMate,
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Mate,
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Ghost2LocalMap);
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candidateMate[v] = w;
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}
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if (isAlreadyMatched(verLocInd[k], StartIndex, EndIndex, GMate, Mate, Ghost2LocalMap))
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{
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w = computeCandidateMate(verLocPtr[v],
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verLocPtr[v + 1],
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edgeLocWeight, 0,
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verLocInd,
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StartIndex,
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EndIndex,
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GMate,
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Mate,
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Ghost2LocalMap);
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candidateMate[v] = w;
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}
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if (w >= 0)
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{
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if (w >= 0)
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{
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#pragma omp atomic
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(*myCard)++;
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if ((w < StartIndex) || (w > EndIndex))
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{ // w is a ghost vertex
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(*myCard)++;
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if ((w < StartIndex) || (w > EndIndex))
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{ // w is a ghost vertex
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option = 2;
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if (candidateMate[NLVer + Ghost2LocalMap[w]] == v + StartIndex)
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{
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option = 1;
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Mate[v] = w;
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GMate[Ghost2LocalMap[w]] = v + StartIndex; // w is a Ghost
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} // End of if CandidateMate[w] = v
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} // End of if a Ghost Vertex
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else
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{ // w is a local vertex
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if (candidateMate[w - StartIndex] == (v + StartIndex))
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{
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option = 3;
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Mate[v] = w; // v is local
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Mate[w - StartIndex] = v + StartIndex; // w is local
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#ifdef PRINT_DEBUG_INFO_
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cout << "\n(" << myRank << ")Sending a request message (291):";
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cout << "\n(" << myRank << ")Local is: " << v + StartIndex << " Ghost is " << w << " Owner is: " << findOwnerOfGhost(w, verDistance, myRank, numProcs) << endl;
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cout << "\n(" << myRank << ")MATCH: (" << v + StartIndex << "," << w << ") ";
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fflush(stdout);
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#endif
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} // End of if ( candidateMate[w-StartIndex] == (v+StartIndex) )
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} // End of Else
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} // End of second if
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} // End critical processExposed
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} // End of if(w >=0)
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else
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{
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// This piece of code is executed a really small amount of times
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adj11 = verLocPtr[v];
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adj12 = verLocPtr[v + 1];
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for (k1 = adj11; k1 < adj12; k1++)
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{
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w = verLocInd[k1];
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if ((w < StartIndex) || (w > EndIndex))
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{ // A ghost
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#ifdef PRINT_DEBUG_INFO_
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cout << "\n(" << myRank << ")Sending a failure message: ";
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cout << "\n(" << myRank << ")Ghost is " << w << " Owner is: " << findOwnerOfGhost(w, verDistance, myRank, numProcs);
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fflush(stdout);
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#endif
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#pragma omp atomic
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@@ -94,86 +140,56 @@ void PARALLEL_PROCESS_EXPOSED_VERTEX_B(MilanLongInt NLVer,
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privateQLocalVtx.push_back(v + StartIndex);
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privateQGhostVtx.push_back(w);
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privateQMsgType.push_back(REQUEST);
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privateQMsgType.push_back(FAILURE);
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privateQOwner.push_back(ghostOwner);
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if (candidateMate[NLVer + Ghost2LocalMap[w]] == v + StartIndex)
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{
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privateU.push_back(v + StartIndex);
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privateU.push_back(w);
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Mate[v] = w;
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// FIXME could this instruction create errors?
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GMate[Ghost2LocalMap[w]] = v + StartIndex; // w is a Ghost
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#ifdef PRINT_DEBUG_INFO_
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cout << "\n(" << myRank << ")MATCH: (" << v + StartIndex << "," << w << ")";
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fflush(stdout);
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#endif
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// TODO refactor this!!
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// Decrement the counter:
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PROCESS_CROSS_EDGE(&Counter[Ghost2LocalMap[w]], S);
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} // End of if CandidateMate[w] = v
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} // End of if a Ghost Vertex
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else
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{ // w is a local vertex
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if (candidateMate[w - StartIndex] == (v + StartIndex))
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{
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privateU.push_back(v + StartIndex);
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privateU.push_back(w);
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Mate[v] = w; // v is local
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// FIXME this instruction could create errors
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Mate[w - StartIndex] = v + StartIndex; // w is local
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#ifdef PRINT_DEBUG_INFO_
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cout << "\n(" << myRank << ")MATCH: (" << v + StartIndex << "," << w << ") ";
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fflush(stdout);
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#endif
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} // End of if ( candidateMate[w-StartIndex] == (v+StartIndex) )
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} // End of Else
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continue;
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} // End of second if
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} // End of if(w >=0)
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// This piece of code is executed a really small amount of times, I will not allocate a
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// huge amount of memory for the private data structures.
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adj11 = verLocPtr[v];
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adj12 = verLocPtr[v + 1];
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for (k1 = adj11; k1 < adj12; k1++)
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{
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w = verLocInd[k1];
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if ((w < StartIndex) || (w > EndIndex))
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{ // A ghost
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#ifdef PRINT_DEBUG_INFO_
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cout << "\n(" << myRank << ")Sending a failure message: ";
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cout << "\n(" << myRank << ")Ghost is " << w << " Owner is: " << findOwnerOfGhost(w, verDistance, myRank, numProcs);
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fflush(stdout);
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#endif
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#pragma omp atomic
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(*msgInd)++;
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#pragma omp atomic
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(*NumMessagesBundled)++;
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ghostOwner = findOwnerOfGhost(w, verDistance, myRank, numProcs);
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assert(ghostOwner != -1);
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assert(ghostOwner != myRank);
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PCounter[ghostOwner]++;
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privateQLocalVtx.push_back(v + StartIndex);
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privateQGhostVtx.push_back(w);
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privateQMsgType.push_back(FAILURE);
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privateQOwner.push_back(ghostOwner);
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} // End of if(GHOST)
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} // End of for loop
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} // End of if(GHOST)
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} // End of for loop
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}
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// End: PARALLEL_PROCESS_EXPOSED_VERTEX_B(v)
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switch (option)
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{
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case -1:
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break;
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case 1:
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privateU.push_back(v + StartIndex);
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privateU.push_back(w);
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#ifdef PRINT_DEBUG_INFO_
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cout << "\n(" << myRank << ")MATCH: (" << v + StartIndex << "," << w << ")";
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fflush(stdout);
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#endif
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// Decrement the counter:
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PROCESS_CROSS_EDGE(&Counter[Ghost2LocalMap[w]], S);
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case 2:
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#ifdef PRINT_DEBUG_INFO_
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cout << "\n(" << myRank << ")Sending a request message (291):";
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cout << "\n(" << myRank << ")Local is: " << v + StartIndex << " Ghost is " << w << " Owner is: " << findOwnerOfGhost(w, verDistance, myRank, numProcs) << endl;
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fflush(stdout);
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#endif
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#pragma omp atomic
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(*msgInd)++;
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#pragma omp atomic
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(*NumMessagesBundled)++;
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ghostOwner = findOwnerOfGhost(w, verDistance, myRank, numProcs);
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assert(ghostOwner != -1);
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assert(ghostOwner != myRank);
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PCounter[ghostOwner]++;
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privateQLocalVtx.push_back(v + StartIndex);
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privateQGhostVtx.push_back(w);
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privateQMsgType.push_back(REQUEST);
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privateQOwner.push_back(ghostOwner);
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break;
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case 3:
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default:
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privateU.push_back(v + StartIndex);
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privateU.push_back(w);
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break;
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}
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} // End of for ( v=0; v < NLVer; v++ )
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queuesTransfer(U, privateU, QLocalVtx,
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