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amg4psblas/amgprec/impl/aggregator/algoDistEdgeApproxDomEdgesL...

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#include "MatchBoxPC.h"
// ***********************************************************************
//
// MatchboxP: A C++ library for approximate weighted matching
// Mahantesh Halappanavar (hala@pnnl.gov)
// Pacific Northwest National Laboratory
//
// ***********************************************************************
//
// Copyright (2021) Battelle Memorial Institute
// All rights reserved.
//
// Redistribution and use in source and binary forms, with or without
// modification, are permitted provided that the following conditions
// are met:
//
// 1. Redistributions of source code must retain the above copyright
// notice, this list of conditions and the following disclaimer.
//
// 2. Redistributions in binary form must reproduce the above copyright
// notice, this list of conditions and the following disclaimer in the
// documentation and/or other materials provided with the distribution.
//
// 3. Neither the name of the copyright holder nor the names of its
// contributors may be used to endorse or promote products derived from
// this software without specific prior written permission.
//
// THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
// "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT
// LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS
// FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE
// COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT,
// INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING,
// BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES;
// LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
// CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT
// LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN
// ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
// POSSIBILITY OF SUCH DAMAGE.
//
// ************************************************************************
//////////////////////////////////////////////////////////////////////////////////////
/////////////////////////// DOMINATING EDGES MODEL ///////////////////////////////////
//////////////////////////////////////////////////////////////////////////////////////
/* Function : algoDistEdgeApproxDomEdgesLinearSearchMesgBndlSmallMate()
*
* Date : New update: Feb 17, 2019, Richland, Washington.
* Date : Original development: May 17, 2009, E&CS Bldg.
*
* Purpose : Compute Approximate Maximum Weight Matching in Linear Time
*
* Args : inputMatrix - instance of Compressed-Col format of Matrix
* Mate - The Mate array
*
* Returns : By Value: (void)
* By Reference: Mate
*
* Comments : 1/2 Approx Algorithm. Picks the locally available heaviest edge.
* Assumption: The Mate Array is empty.
*/
/*
NLVer = #of vertices, NLEdge = #of edges
CSR/CSC/Compressed format: verLocPtr = Pointer, verLocInd = Index, edgeLocWeight = edge weights (positive real numbers)
verDistance = A vector of size |P|+1 containing the cumulative number of vertices per process
Mate = A vector of size |V_p| (local subgraph) to store the output (matching)
MPI: myRank, numProcs, comm,
Statistics: msgIndSent, msgActualSent, msgPercent : Size: |P| number of processes in the comm-world
Statistics: ph0_time, ph1_time, ph2_time: Runtimes
Statistics: ph1_card, ph2_card : Size: |P| number of processes in the comm-world (number of matched edges in Phase 1 and Phase 2)
*/
#ifdef SERIAL_MPI
#else
// DOUBLE PRECISION VERSION
//WARNING: The vertex block on a given rank is contiguous
void dalgoDistEdgeApproxDomEdgesLinearSearchMesgBndlSmallMateC(
MilanLongInt NLVer, MilanLongInt NLEdge,
MilanLongInt* verLocPtr, MilanLongInt* verLocInd,
MilanReal* edgeLocWeight,
MilanLongInt* verDistance,
MilanLongInt* Mate,
MilanInt myRank, MilanInt numProcs, MPI_Comm comm,
MilanLongInt* msgIndSent, MilanLongInt* msgActualSent,
MilanReal* msgPercent,
MilanReal* ph0_time, MilanReal* ph1_time, MilanReal* ph2_time,
MilanLongInt* ph1_card, MilanLongInt* ph2_card ) {
#if !defined(SERIAL_MPI)
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Within algoEdgeApproxDominatingEdgesLinearSearchMessageBundling()"; fflush(stdout);
#endif
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<") verDistance ["<< verDistance[0] << "," << verDistance[1] << "," << verDistance[2] <<"," << verDistance[3] <<"]"; fflush(stdout);
#endif
#ifdef DEBUG_HANG_
if (myRank == 0) cout<<"\n("<<myRank<<") verDistance ["<< verDistance[0] << "," << verDistance[1] << "," << verDistance[2] <<"," << verDistance[3] <<"]"; fflush(stdout);
#endif
//inputSubGraph.getStartEndIndices(StartIndex, EndIndex);
MilanLongInt StartIndex = verDistance[myRank]; //The starting vertex owned by the current rank
//MilanLongInt EndIndex = verDistance[myRank+1]; //The ending vertex owned by the current rank
MilanLongInt EndIndex = verDistance[myRank+1]-1; //The ending vertex owned by the current rank
MPI_Status computeStatus;
const int ComputeTag = 7; //Predefined tag
const int BundleTag = 9; //Predefined tag
int error_codeC;
error_codeC = MPI_Comm_set_errhandler(MPI_COMM_WORLD, MPI_ERRORS_RETURN);
char error_message[MPI_MAX_ERROR_STRING];
int message_length;
//MilanLongInt NLVer=0, NLEdge=0, StartIndex=0, EndIndex=0;
MilanLongInt msgActual=0, msgInd=0;
MilanReal heaviestEdgeWt=0.0f; //Assumes positive weight
MilanReal startTime, finishTime;
//MilanReal Precision = MPI_Wtick(); //Get the precision of the MPI Timer
startTime = MPI_Wtime();
//Get the iterators for the graph:
//vector<MilanLongInt>::iterator verLocPtr = inputSubGraph.getVerPtr_b();
//vector<MilanLongInt>::iterator verLocInd = inputSubGraph.getVerInd_b();
//vector<MilanReal>::iterator edgeLocWeight = inputSubGraph.getEdgeWt_b();
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")NV: "<<NLVer<<" Edges: "<<NLEdge; fflush(stdout);
cout<<"\n("<<myRank<<")StartIndex: "<<StartIndex<<" EndIndex: "<<EndIndex; fflush(stdout);
#endif
//Other Variables:
MilanLongInt u=-1, v=-1, w=-1, i=0;
MilanLongInt k=-1, adj1=-1, adj2=-1;
MilanLongInt k1=-1, adj11=-1, adj12=-1;
MilanLongInt myCard = 0;
MilanInt Sender=0; // This is the rank of the sending nodes, it has to be an integer! Fabio
//Build the Ghost Vertex Set: Vg
map<MilanLongInt, MilanLongInt> Ghost2LocalMap; //Map each ghost vertex to a local vertex
// index that starts with zero to |Vg| - 1
map<MilanLongInt, MilanLongInt>::iterator storedAlready;
vector<MilanLongInt> Counter; //Store the edge count for each ghost vertex
MilanLongInt numGhostVertices = 0, numGhostEdges = 0, insertMe=0; //Number of Ghost vertices
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")About to compute Ghost Vertices..."; fflush(stdout);
#endif
#ifdef DEBUG_HANG_
if (myRank == 0) cout<<"\n("<<myRank<<")About to compute Ghost Vertices..."; fflush(stdout);
#endif
for ( i=0; i<NLEdge; i++ ) { //O(m) - Each edge stored twice
insertMe = verLocInd[i];
//cout<<"InsertMe on Process "<<myRank<<" is: "<<insertMe<<endl;
if ( (insertMe < StartIndex) || (insertMe > EndIndex) ) { //Find a ghost
storedAlready = Ghost2LocalMap.find( insertMe );
if ( storedAlready != Ghost2LocalMap.end() ) { //Has already been added
//cout<<"Process "<<myRank<<" found: "<<storedAlready->first<<" - "<<storedAlready->second<<endl;
Counter[storedAlready->second]++; //Increment the counter
numGhostEdges++;
} else { //Insert an entry for the ghost:
//cout<<"Process "<<myRank<<" * New insert: Key="<<insertMe<< " : Value="<<numGhostVertices<<endl;
Ghost2LocalMap[insertMe] = numGhostVertices; //Add a map entry
Counter.push_back(1); //Initialize the counter
numGhostEdges++;
numGhostVertices++; //Increment the number of ghost vertices
} //End of else()
} //End of if ( (insertMe < StartIndex) || (insertMe > EndIndex) )
} //End of for(ghost vertices)
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")NGhosts:" << numGhostVertices << " GhostEdges: "<<numGhostEdges;
if (!Ghost2LocalMap.empty()) {
cout<<"\n("<<myRank<<")Final Map : on process ";
cout<<"\n("<<myRank<<")Key \t Value \t Counter \n"; fflush(stdout);
storedAlready = Ghost2LocalMap.begin();
do {
cout<<storedAlready->second<<" - "<<storedAlready->first<<" : "<<Counter[storedAlready->second]<<endl;
fflush(stdout);
storedAlready++;
} while ( storedAlready != Ghost2LocalMap.end() );
}
#endif
//Build Adjacency Lists for Ghost Vertices:
//cout<<"Building Ghost data structures ... \n\n";
vector<MilanLongInt> verGhostPtr, verGhostInd, tempCounter;
//Mate array for ghost vertices:
vector<MilanLongInt> GMate; //Proportional to the number of ghost vertices
try {
verGhostPtr.reserve(numGhostVertices+1); //Pointer Vector
tempCounter.reserve(numGhostVertices); //Pointer Vector
verGhostInd.reserve(numGhostEdges); //Index Vector
GMate.reserve(numGhostVertices); //Ghost Mate Vector
} catch ( length_error ) {
cout<<"Error in function algoDistEdgeApproxDominatingEdgesLinearSearch: \n";
cout<<"Not enough memory to allocate the internal variables \n";
exit(1);
}
//Initialize the Vectors:
verGhostPtr.resize(numGhostVertices+1, 0); //Pointer Vector
tempCounter.resize(numGhostVertices, 0); //Temporary Counter
verGhostInd.resize(numGhostEdges, -1); //Index Vector
GMate.resize(numGhostVertices, -1); //Temporary Counter
verGhostPtr[0] = 0; //The first value
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Ghost Vertex Pointer: "; fflush(stdout);
#endif
for ( i=0; i<numGhostVertices; i++ ) { //O(|Ghost Vertices|)
verGhostPtr[i+1] = verGhostPtr[i] + Counter[i];
#ifdef PRINT_DEBUG_INFO_
cout<<verGhostPtr[i]<<"\t"; fflush(stdout);
#endif
}
#ifdef PRINT_DEBUG_INFO_
if ( numGhostVertices > 0 )
cout<<verGhostPtr[numGhostVertices]<<"\n";
fflush(stdout);
#endif
for ( v=0; v < NLVer; v++ ) {
adj1 = verLocPtr[v]; //Vertex Pointer
adj2 = verLocPtr[v+1];
for( k = adj1; k < adj2; k++ ) {
w = verLocInd[k]; //Get the adjacent vertex
if ( (w < StartIndex) || (w > EndIndex) ) { //Find a ghost
insertMe = verGhostPtr[Ghost2LocalMap[w]] + tempCounter[Ghost2LocalMap[w]]; //Where to insert
verGhostInd[insertMe] = v+StartIndex; //Add the adjacency
tempCounter[Ghost2LocalMap[w]]++; //Increment the counter
} //End of if((w < StartIndex) || (w > EndIndex))
} //End of for(k)
} //End of for (v)
tempCounter.clear(); //Do not need this any more
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Ghost Vertex Index: ";
for ( v=0; v < numGhostEdges; v++ )
cout<<verGhostInd[v]<<"\t";
cout<<endl; fflush(stdout);
#endif
//Data structures for sending and receiving messages:
vector<MilanLongInt> Message; // [ u, v, message_type ]
Message.resize(3,-1);
const MilanLongInt REQUEST = 1;
const MilanLongInt SUCCESS = 2;
const MilanLongInt FAILURE = 3;
const MilanLongInt SIZEINFO = 4;
MilanLongInt message_type = 0;
//Data structures for Message Bundling:
//Although up to two messages can be sent along any cross edge,
//only one message will be sent in the initialization phase -
//one of: REQUEST/FAILURE/SUCCESS
vector<MilanLongInt> QLocalVtx, QGhostVtx, QMsgType;
vector<MilanInt> QOwner; // Changed by Fabio to be an integer, addresses needs to be integers!
vector<MilanLongInt> PCounter;
MilanLongInt NumMessagesBundled=0;
MilanInt ghostOwner=0; // Changed by Fabio to be an integer, addresses needs to be integers!
try {
QLocalVtx.reserve(numGhostEdges); //Local Vertex
QGhostVtx.reserve(numGhostEdges); //Ghost Vertex
QMsgType.reserve(numGhostEdges); //Message Type (Request/Failure)
QOwner.reserve(numGhostEdges); //Owner of the ghost: COmpute once and use later
PCounter.reserve( numProcs); //Store How many messages will be sent to each processor
} catch ( length_error ) {
cout<<"Error in function algoDistEdgeApproxDominatingEdgesMessageBundling: \n";
cout<<"Not enough memory to allocate the internal variables \n";
exit(1);
}
PCounter.resize(numProcs, 0); //Only initialize the counter variable
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Allocating CandidateMate.. "; fflush(stdout);
#endif
//Allocate Data Structures:
vector<MilanLongInt> candidateMate;
try {
candidateMate.reserve(NLVer+numGhostVertices); //Dominating edge
} catch ( length_error ) {
cout<<"Error in function algoDistEdgeApproxDominatingEdgesLinearSearch: \n";
cout<<"Not enough memory to allocate the internal variables \n";
exit(1);
}
//Initialize the Vectors:
candidateMate.resize(NLVer+numGhostVertices, -1);
//The Queue Data Structure for the Dominating Set:
staticQueue U(NLVer+numGhostVertices); //Max size is the number of vertices
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<"=========================************==============================="<<endl; fflush(stdout);
fflush(stdout);
#endif
//MPI_Barrier(comm);
finishTime = MPI_Wtime();
*ph0_time = finishTime-startTime; //Time taken for Phase-0: Initialization
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<") Setup Time :"<< *ph0_time <<endl; fflush(stdout);
fflush(stdout);
#endif
#ifdef DEBUG_HANG_
if (myRank == 0) cout<<"\n("<<myRank<<") Setup Time :"<< *ph0_time <<endl; fflush(stdout);
#endif
startTime = MPI_Wtime();
/////////////////////////////////////////////////////////////////////////////////////////
//////////////////////////////////// INITIALIZATION /////////////////////////////////////
/////////////////////////////////////////////////////////////////////////////////////////
//Compute the Initial Matching Set:
MilanLongInt S = numGhostVertices; //Initialize S with number of Ghost Vertices
for ( v=0; v < NLVer; v++ ) {
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Processing: "<<v+StartIndex<<endl; fflush(stdout);
#endif
//Start: PARALLEL_PROCESS_EXPOSED_VERTEX_B(v)
//Start: PARALLEL_COMPUTE_CANDIDATE_MATE_B(v)
adj1 = verLocPtr[v];
adj2 = verLocPtr[v+1];
w = -1;
heaviestEdgeWt = MilanRealMin; //Assign the smallest Value possible first LDBL_MIN
for( k = adj1; k < adj2; k++ ) {
if ( (verLocInd[k]<StartIndex) || (verLocInd[k]>EndIndex) ) { //Is it a ghost vertex?
if(GMate[Ghost2LocalMap[verLocInd[k]]] >= 0 )// Already matched
continue;
} else { //A local vertex
if( Mate[verLocInd[k]-StartIndex] >= 0 ) // Already matched
continue;
}
if( (edgeLocWeight[k] > heaviestEdgeWt) ||
((edgeLocWeight[k] == heaviestEdgeWt)&&(w < verLocInd[k])) ) {
heaviestEdgeWt = edgeLocWeight[k];
w = verLocInd[k];
}
} //End of for loop
candidateMate[v] = w;
//End: PARALLEL_COMPUTE_CANDIDATE_MATE_B(v)
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")"<<v+StartIndex<<" Points to: "<<w; fflush(stdout);
#endif
//If found a dominating edge:
if ( w >= 0 ) {
if ( (w < StartIndex) || (w > EndIndex) ) { //w is a ghost vertex
//Build the Message Packet:
//Message[0] = v+StartIndex; //LOCAL
//Message[1] = w; //GHOST
//Message[2] = REQUEST; //TYPE
//Send a Request (Asynchronous)
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Sending a request message (291):";
cout<<"\n("<<myRank<<")Local is: "<<v+StartIndex<<" Ghost is "<<w<<" Owner is: "<< findOwnerOfGhost(w, verDistance, myRank, numProcs) <<endl;
fflush(stdout);
#endif
/* MPI_Bsend(&Message[0], 3, MPI_INT, inputSubGraph.findOwner(w),
ComputeTag, comm);*/
QLocalVtx.push_back(v+StartIndex);
QGhostVtx.push_back(w);
QMsgType.push_back(REQUEST);
//ghostOwner = inputSubGraph.findOwner(w);
ghostOwner = findOwnerOfGhost(w, verDistance, myRank, numProcs); assert(ghostOwner != -1); assert(ghostOwner != myRank);
QOwner.push_back(ghostOwner);
PCounter[ghostOwner]++;
NumMessagesBundled++;
msgInd++;
if ( candidateMate[NLVer+Ghost2LocalMap[w]] == v+StartIndex ) {
Mate[v] = w;
GMate[Ghost2LocalMap[w]]=v+StartIndex; //w is a Ghost
//Q.push_back(u);
U.push_back(v+StartIndex);
U.push_back(w);
myCard++;
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")MATCH: ("<<v+StartIndex<<","<<w<<")"; fflush(stdout);
#endif
//Decrement the counter:
//Start: PARALLEL_PROCESS_CROSS_EDGE_B(v)
if ( Counter[Ghost2LocalMap[w]] > 0 ) {
Counter[Ghost2LocalMap[w]] = Counter[Ghost2LocalMap[w]] - 1; //Decrement
if ( Counter[Ghost2LocalMap[w]] == 0 ) {
S--; //Decrement S
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Decrementing S: Ghost vertex "<<w<<" has received all its messages";
fflush(stdout);
#endif
}
} //End of if Counter[w] > 0
//End: PARALLEL_PROCESS_CROSS_EDGE_B(v)
} //End of if CandidateMate[w] = v
} //End of if a Ghost Vertex
else { // w is a local vertex
if ( candidateMate[w-StartIndex] == (v+StartIndex) ) {
Mate[v] = w; //v is local
Mate[w-StartIndex] = v+StartIndex; //w is local
//Q.push_back(u);
U.push_back(v+StartIndex);
U.push_back(w);
myCard++;
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")MATCH: ("<<v+StartIndex<<","<<w<<") "; fflush(stdout);
#endif
} //End of if ( candidateMate[w-StartIndex] == (v+StartIndex) )
} //End of Else
} //End of if(w >=0)
else {
adj11 = verLocPtr[v];
adj12 = verLocPtr[v+1];
for( k1 = adj11; k1 < adj12; k1++ ) {
w = verLocInd[k1];
if ( (w < StartIndex) || (w > EndIndex) ) { //A ghost
//Build the Message Packet:
//Message[0] = v+StartIndex; //LOCAL
//Message[1] = w; //GHOST
//Message[2] = FAILURE; //TYPE
//Send a Request (Asynchronous)
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Sending a failure message: ";
cout<<"\n("<<myRank<<")Ghost is "<<w<<" Owner is: "<<findOwnerOfGhost(w, verDistance, myRank, numProcs);
fflush(stdout);
#endif
/* MPI_Bsend(&Message[0], 3, MPI_INT, inputSubGraph.findOwner(w),
ComputeTag, comm); */
QLocalVtx.push_back(v+StartIndex);
QGhostVtx.push_back(w);
QMsgType.push_back(FAILURE);
//ghostOwner = inputSubGraph.findOwner(w);
ghostOwner = findOwnerOfGhost(w, verDistance, myRank, numProcs); assert(ghostOwner != -1); assert(ghostOwner != myRank);
QOwner.push_back(ghostOwner);
PCounter[ghostOwner]++;
NumMessagesBundled++;
msgInd++;
} //End of if(GHOST)
} //End of for loop
} // End of Else: w == -1
//End: PARALLEL_PROCESS_EXPOSED_VERTEX_B(v)
} //End of for ( v=0; v < NLVer; v++ )
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<"=========================************==============================="<<endl; fflush(stdout);
fflush(stdout);
#endif
///////////////////////////////////////////////////////////////////////////////////
/////////////////////////// PROCESS MATCHED VERTICES //////////////////////////////
///////////////////////////////////////////////////////////////////////////////////
while ( /*!Q.empty()*/ !U.empty() ) {
//Q.pop_front();
u = U.pop_front(); //Get an element from the queue
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")u: "<<u; fflush(stdout);
#endif
if ( (u >= StartIndex) && (u <= EndIndex) ) { //Process Only the Local Vertices
//Get the Adjacency list for u
adj1 = verLocPtr[u-StartIndex]; //Pointer
adj2 = verLocPtr[u-StartIndex+1];
for( k = adj1; k < adj2; k++ ) {
v = verLocInd[k];
if ( (v >= StartIndex) && (v <= EndIndex) ) { //If Local Vertex:
if ( (v<StartIndex) || (v>EndIndex) ) { //Is it a ghost vertex?
if(GMate[Ghost2LocalMap[v]] >= 0 )// Already matched
continue;
} else { //A local vertex
if( Mate[v-StartIndex] >= 0 ) // Already matched
continue;
} //End of else
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")v: "<<v<<" c(v)= "<<candidateMate[v-StartIndex]<<" Mate[v]: "<<Mate[v];
fflush(stdout);
#endif
if ( candidateMate[v-StartIndex] == u ) { //Only if pointing to the matched vertex
//Start: PARALLEL_PROCESS_EXPOSED_VERTEX_B(v)
//Start: PARALLEL_COMPUTE_CANDIDATE_MATE_B(v)
adj11 = verLocPtr[v-StartIndex];
adj12 = verLocPtr[v-StartIndex+1];
w = -1;
heaviestEdgeWt = MilanRealMin; //Assign the smallest Value possible first LDBL_MIN
for( k1 = adj11; k1 < adj12; k1++ ) {
if ( (verLocInd[k1]<StartIndex) || (verLocInd[k1]>EndIndex) ) { //Is it a ghost vertex?
if(GMate[Ghost2LocalMap[verLocInd[k1]]] >= 0 )// Already matched
continue;
} else { //A local vertex
if( Mate[verLocInd[k1]-StartIndex] >= 0 ) // Already matched
continue;
}
if( (edgeLocWeight[k1] > heaviestEdgeWt) ||
((edgeLocWeight[k1] == heaviestEdgeWt)&&(w < verLocInd[k1])) ) {
heaviestEdgeWt = edgeLocWeight[k1];
w = verLocInd[k1];
}
} //End of for loop
candidateMate[v-StartIndex] = w;
//End: PARALLEL_COMPUTE_CANDIDATE_MATE_B(v)
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")"<<v<<" Points to: "<<w; fflush(stdout);
#endif
//If found a dominating edge:
if ( w >= 0 ) {
if ( (w < StartIndex) || (w > EndIndex) ) { //A ghost
//Build the Message Packet:
//Message[0] = v; //LOCAL
//Message[1] = w; //GHOST
//Message[2] = REQUEST; //TYPE
//Send a Request (Asynchronous)
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Sending a request message:";
cout<<"\n("<<myRank<<")Ghost is "<<w<<" Owner is: "<<findOwnerOfGhost(w, verDistance, myRank, numProcs);
#endif
/*MPI_Bsend(&Message[0], 3, MPI_INT, inputSubGraph.findOwner(w),
ComputeTag, comm);*/
QLocalVtx.push_back(v);
QGhostVtx.push_back(w);
QMsgType.push_back(REQUEST);
//ghostOwner = inputSubGraph.findOwner(w);
ghostOwner = findOwnerOfGhost(w, verDistance, myRank, numProcs); assert(ghostOwner != -1); assert(ghostOwner != myRank);
QOwner.push_back(ghostOwner);
PCounter[ghostOwner]++;
NumMessagesBundled++;
msgInd++;
if ( candidateMate[NLVer+Ghost2LocalMap[w]] == v ) {
Mate[v-StartIndex] = w; //v is a local vertex
GMate[Ghost2LocalMap[w]] = v; //w is a ghost vertex
//Q.push_back(u);
U.push_back(v);
U.push_back(w);
myCard++;
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")MATCH: ("<<v<<","<<w<<") "; fflush(stdout);
#endif
//Decrement the counter:
//Start: PARALLEL_PROCESS_CROSS_EDGE_B(v,w)
if ( Counter[Ghost2LocalMap[w]] > 0 ) {
Counter[Ghost2LocalMap[w]] = Counter[Ghost2LocalMap[w]] - 1; //Decrement
if ( Counter[Ghost2LocalMap[w]] == 0 ) {
S--; //Decrement S
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Decrementing S: Ghost vertex "<<w<<" has received all its messages";
fflush(stdout);
#endif
}
} //End of if Counter[w] > 0
//End: PARALLEL_PROCESS_CROSS_EDGE_B(v,w)
} //End of if CandidateMate[w] = v
} //End of if a Ghost Vertex
else { //w is a local vertex
if ( candidateMate[w-StartIndex] == v ) {
Mate[v-StartIndex] = w; //v is a local vertex
Mate[w-StartIndex] = v; //w is a local vertex
//Q.push_back(u);
U.push_back(v);
U.push_back(w);
myCard++;
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")MATCH: ("<<v<<","<<w<<") "; fflush(stdout);
#endif
} //End of if(CandidateMate(w) = v
} //End of Else
} //End of if(w >=0)
else {
adj11 = verLocPtr[v-StartIndex];
adj12 = verLocPtr[v-StartIndex+1];
for( k1 = adj11; k1 < adj12; k1++ ) {
w = verLocInd[k1];
if ( (w < StartIndex) || (w > EndIndex) ) { //A ghost
//Build the Message Packet:
//Message[0] = v; //LOCAL
//Message[1] = w; //GHOST
//Message[2] = FAILURE; //TYPE
//Send a Request (Asynchronous)
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Sending a failure message: ";
cout<<"\n("<<myRank<<")Ghost is "<<w<<" Owner is: "<<findOwnerOfGhost(w, verDistance, myRank, numProcs);
fflush(stdout);
#endif
/* MPI_Bsend(&Message[0], 3, MPI_INT, inputSubGraph.findOwner(w),
ComputeTag, comm); */
QLocalVtx.push_back(v);
QGhostVtx.push_back(w);
QMsgType.push_back(FAILURE);
//ghostOwner = inputSubGraph.findOwner(w);
ghostOwner = findOwnerOfGhost(w, verDistance, myRank, numProcs); assert(ghostOwner != -1); assert(ghostOwner != myRank);
QOwner.push_back(ghostOwner);
PCounter[ghostOwner]++;
NumMessagesBundled++;
msgInd++;
} //End of if(GHOST)
} //End of for loop
} // End of Else: w == -1
//End: PARALLEL_PROCESS_EXPOSED_VERTEX_B(v)
} //End of If (candidateMate[v-StartIndex] == u)
} //End of if ( (v >= StartIndex) && (v <= EndIndex) ) //If Local Vertex:
else { //Neighbor is a ghost vertex
if ( candidateMate[NLVer+Ghost2LocalMap[v]] == u )
candidateMate[NLVer+Ghost2LocalMap[v]] = -1;
if ( v != Mate[u-StartIndex] ) { //u is local
//Build the Message Packet:
//Message[0] = u; //LOCAL
//Message[1] = v; //GHOST
//Message[2] = SUCCESS; //TYPE
//Send a Request (Asynchronous)
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Sending a success message: ";
cout<<"\n("<<myRank<<")Ghost is "<<v<<" Owner is: "<<findOwnerOfGhost(v, verDistance, myRank, numProcs)<<"\n"; fflush(stdout);
#endif
/* MPI_Bsend(&Message[0], 3, MPI_INT, inputSubGraph.findOwner(v),
ComputeTag, comm); */
QLocalVtx.push_back(u);
QGhostVtx.push_back(v);
QMsgType.push_back(SUCCESS);
//ghostOwner = inputSubGraph.findOwner(v);
ghostOwner = findOwnerOfGhost(v, verDistance, myRank, numProcs); assert(ghostOwner != -1); assert(ghostOwner != myRank);
QOwner.push_back(ghostOwner);
PCounter[ghostOwner]++;
NumMessagesBundled++;
msgInd++;
} //End of If( v != Mate[u] )
} //End of Else //A Ghost Vertex
} //End of For Loop adj(u)
} //End of if ( (u >= StartIndex) && (u <= EndIndex) ) //Process Only If a Local Vertex
} //End of while ( /*!Q.empty()*/ !U.empty() )
///////////////////////// END OF PROCESS MATCHED VERTICES /////////////////////////
#ifdef DEBUG_HANG_
if (myRank == 0) cout<<"\n("<<myRank<<") Send Bundles" <<endl; fflush(stdout);
#endif
/////////////////////////////////////////////////////////////////////////////////////////
///////////////////////////// SEND BUNDLED MESSAGES /////////////////////////////////////
/////////////////////////////////////////////////////////////////////////////////////////
//Data structures for Bundled Messages:
vector<MilanLongInt> PCumulative, PMessageBundle, PSizeInfoMessages;
MilanLongInt myIndex=0;
try {
PMessageBundle.reserve(NumMessagesBundled*3); //Three integers per message
PCumulative.reserve(numProcs+1); //Similar to Row Pointer vector in CSR data structure
PSizeInfoMessages.reserve(numProcs*3); //Buffer to hold the Size info message packets
} catch ( length_error ) {
cout<<"Error in function algoDistEdgeApproxDominatingEdgesMessageBundling: \n";
cout<<"Not enough memory to allocate the internal variables \n";
exit(1);
}
PMessageBundle.resize(NumMessagesBundled*3, -1);//Initialize
PCumulative.resize(numProcs+1, 0); //Only initialize the counter variable
PSizeInfoMessages.resize(numProcs*3, 0);
for (MilanInt i=0; i<numProcs; i++) // Changed by Fabio to be an integer, addresses needs to be integers!
PCumulative[i+1]=PCumulative[i]+PCounter[i];
//Reuse PCounter to keep track of how many messages were inserted:
for (MilanInt i=0; i<numProcs; i++) // Changed by Fabio to be an integer, addresses needs to be integers!
PCounter[i]=0;
//Build the Message Bundle packet:
for (MilanInt i=0; i<NumMessagesBundled; i++) { // Changed by Fabio to be an integer, addresses needs to be integers!
myIndex = ( PCumulative[QOwner[i]] + PCounter[QOwner[i]] )*3;
PMessageBundle[myIndex+0] = QLocalVtx[i];
PMessageBundle[myIndex+1] = QGhostVtx[i];
PMessageBundle[myIndex+2] = QMsgType[i];
PCounter[QOwner[i]]++;
}
//Send the Bundled Messages: Use ISend
vector<MPI_Request> SRequest; //Requests that are used for each send message
vector<MPI_Status> SStatus; //Status of sent messages, used in MPI_Wait
MilanLongInt MessageIndex=0; //Pointer for current message
try {
SRequest.reserve(numProcs*2); //At most two messages per processor
SStatus.reserve(numProcs*2);//At most two messages per processor
} catch ( length_error ) {
cout<<"Error in function algoDistEdgeApproxDominatingEdgesLinearSearchImmediateSend: \n";
cout<<"Not enough memory to allocate the internal variables \n";
exit(1);
}
MPI_Request myReq; //A sample request
SRequest.resize(numProcs*2,myReq);
MPI_Status myStat; //A sample status
SStatus.resize(numProcs*2,myStat);
//Send the Messages
for (MilanInt i=0; i<numProcs; i++) { // Changed by Fabio to be an integer, addresses needs to be integers!
if (i==myRank) //Do not send anything to yourself
continue;
//Send the Message with information about the size of next message:
//Build the Message Packet:
PSizeInfoMessages[i*3+0] = (PCumulative[i+1]-PCumulative[i])*3; // # of integers in the next message
PSizeInfoMessages[i*3+1] = -1; //Dummy packet
PSizeInfoMessages[i*3+2] = SIZEINFO; //TYPE
//Send a Request (Asynchronous)
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Sending bundled message to process "<<i<<" size: "<<PSizeInfoMessages[i*3+0]<<endl;
fflush(stdout);
#endif
if ( PSizeInfoMessages[i*3+0] > 0 ) { //Send only if it is a nonempty packet
MPI_Isend(&PSizeInfoMessages[i*3+0], 3, TypeMap<MilanLongInt>(), i, ComputeTag, comm, &SRequest[MessageIndex]);
msgActual++;
MessageIndex++;
//Now Send the message with the data packet:
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Sending Bundle to : "<<i<<endl;
for (k=(PCumulative[i]*3); k< (PCumulative[i]*3+PSizeInfoMessages[i*3+0]); k++)
cout<<PMessageBundle[k]<<",";
cout<<endl;
fflush(stdout);
#endif
MPI_Isend(&PMessageBundle[PCumulative[i]*3], PSizeInfoMessages[i*3+0], TypeMap<MilanLongInt>(), i, BundleTag, comm, &SRequest[MessageIndex]);
MessageIndex++;
} //End of if size > 0
}
//Free up temporary memory:
PCumulative.clear();
QLocalVtx.clear();
QGhostVtx.clear();
QMsgType.clear();
QOwner.clear();
PCounter.clear();
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Number of Ghost edges = "<<numGhostEdges;
cout<<"\n("<<myRank<<")Total number of potential message X 2 = "<<numGhostEdges*2;
cout<<"\n("<<myRank<<")Number messages already sent in bundles = "<<NumMessagesBundled;
if (numGhostEdges>0) {
cout<<"\n("<<myRank<<")Percentage of total = "<<((double)NumMessagesBundled/(double)(numGhostEdges*2))*100.0<<"% \n";
}
fflush(stdout);
#endif
//Allocate memory for MPI Send messages:
/* WILL COME BACK HERE - NO NEED TO STORE ALL THIS MEMORY !! */
MilanInt OneMessageSize=0;
MPI_Pack_size(3, TypeMap<MilanLongInt>(), comm, &OneMessageSize); //Size of one message packet
//How many messages to send?
//Potentially three kinds of messages will be sent/received:
//Request, Success, Failure.
//But only two will be sent from a given processor.
//Substract the number of messages that have already been sent as bundled messages:
MilanLongInt numMessagesToSend = numGhostEdges*2 - NumMessagesBundled;
MilanInt BufferSize = (OneMessageSize+MPI_BSEND_OVERHEAD)*numMessagesToSend;
MilanLongInt *Buffer=0;
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Size of One Message from PACK= "<<OneMessageSize;
cout<<"\n("<<myRank<<")Size of Message overhead = "<<MPI_BSEND_OVERHEAD;
cout<<"\n("<<myRank<<")Number of Ghost edges = "<<numGhostEdges;
cout<<"\n("<<myRank<<")Number of remaining message = "<<numMessagesToSend;
cout<<"\n("<<myRank<<")BufferSize = "<<BufferSize;
cout<<"\n("<<myRank<<")Attaching Buffer on.. ";
fflush(stdout);
#endif
if ( BufferSize > 0 ) {
Buffer = (MilanLongInt *) malloc(BufferSize); //Allocate memory
if ( Buffer == 0 ) {
cout<<"Error in function algoDistEdgeApproxDominatingEdgesLinearSearch: \n";
cout<<"Not enough memory to allocate for send buffer on process "<<myRank<<"\n";
exit(1);
}
MPI_Buffer_attach(Buffer, BufferSize); //Attach the Buffer
}
///////////////////////// END OF SEND BUNDLED MESSAGES //////////////////////////////////
finishTime = MPI_Wtime();
*ph1_time = finishTime-startTime; //Time taken for Phase-1
*ph1_card = myCard ; //Cardinality at the end of Phase-1
startTime = MPI_Wtime();
/////////////////////////////////////////////////////////////////////////////////////////
//////////////////////////////////////// MAIN LOOP //////////////////////////////////////
/////////////////////////////////////////////////////////////////////////////////////////
//Main While Loop:
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<"=========================************==============================="<<endl; fflush(stdout);
fflush(stdout);
#endif
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Entering While(true) loop.."; fflush(stdout);
//U.display(); fflush(stdout);
#endif
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<"=========================************==============================="<<endl; fflush(stdout);
fflush(stdout);
#endif
//Buffer to receive bundled messages
//Maximum messages that can be received from any processor is
//twice the edge cut: REQUEST; REQUEST+(FAILURE/SUCCESS)
vector<MilanLongInt> ReceiveBuffer;
MilanLongInt bundleSize=0, bundleCounter=0;
try {
ReceiveBuffer.reserve(numGhostEdges*2*3); //Three integers per cross edge
} catch ( length_error ) {
cout<<"Error in function algoDistEdgeApproxDominatingEdgesMessageBundling: \n";
cout<<"Not enough memory to allocate the internal variables \n";
exit(1);
}
while ( true ) {
#ifdef DEBUG_HANG_
if (myRank == 0) cout<<"\n("<<myRank<<") Main loop" <<endl; fflush(stdout);
#endif
///////////////////////////////////////////////////////////////////////////////////
/////////////////////////// PROCESS MATCHED VERTICES //////////////////////////////
///////////////////////////////////////////////////////////////////////////////////
while ( /*!Q.empty()*/ !U.empty() ) {
//Q.pop_front();
u = U.pop_front(); //Get an element from the queue
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")u: "<<u; fflush(stdout);
#endif
if ( (u >= StartIndex) && (u <= EndIndex) ) { //Process Only If a Local Vertex
//Get the Adjacency list for u
adj1 = verLocPtr[u-StartIndex]; //Pointer
adj2 = verLocPtr[u-StartIndex+1];
for( k = adj1; k < adj2; k++ ) {
v = verLocInd[k];
if ( (v >= StartIndex) && (v <= EndIndex) ) { //v is a Local Vertex:
if ( Mate[v-StartIndex] >= 0 ) // v is already matched
continue;
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")v: "<<v<<" c(v)= "<<candidateMate[v-StartIndex]<<" Mate[v]: "<<Mate[v];
fflush(stdout);
#endif
if ( candidateMate[v-StartIndex] == u ) { //Only if pointing to the matched vertex
//Start: PARALLEL_PROCESS_EXPOSED_VERTEX_B(v)
//Start: PARALLEL_COMPUTE_CANDIDATE_MATE_B(v)
adj11 = verLocPtr[v-StartIndex];
adj12 = verLocPtr[v-StartIndex+1];
w = -1;
heaviestEdgeWt = MilanRealMin; //Assign the smallest Value possible first LDBL_MIN
for( k1 = adj11; k1 < adj12; k1++ ) {
if ( (verLocInd[k1]<StartIndex) || (verLocInd[k1]>EndIndex) ) { //Is it a ghost vertex?
if(GMate[Ghost2LocalMap[verLocInd[k1]]] >= 0 )// Already matched
continue;
}
else { //A local vertex
if( Mate[verLocInd[k1]-StartIndex] >= 0 ) // Already matched
continue;
}
if( (edgeLocWeight[k1] > heaviestEdgeWt) ||
((edgeLocWeight[k1] == heaviestEdgeWt)&&(w < verLocInd[k1])) ) {
heaviestEdgeWt = edgeLocWeight[k1];
w = verLocInd[k1];
}
} //End of for loop
candidateMate[v-StartIndex] = w;
//End: PARALLEL_COMPUTE_CANDIDATE_MATE_B(v)
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")"<<v<<" Points to: "<<w; fflush(stdout);
#endif
//If found a dominating edge:
if ( w >= 0 ) {
if ( (w < StartIndex) || (w > EndIndex) ) { //w is a ghost
//Build the Message Packet:
Message[0] = v; //LOCAL
Message[1] = w; //GHOST
Message[2] = REQUEST; //TYPE
//Send a Request (Asynchronous)
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Sending a request message:";
cout<<"\n("<<myRank<<")Ghost is "<<w<<" Owner is: "<<findOwnerOfGhost(w, verDistance, myRank, numProcs);
fflush(stdout);
#endif
ghostOwner = findOwnerOfGhost(w, verDistance, myRank, numProcs); assert(ghostOwner != -1); assert(ghostOwner != myRank);
MPI_Bsend(&Message[0], 3, TypeMap<MilanLongInt>(), ghostOwner, ComputeTag, comm);
msgInd++; msgActual++;
if ( candidateMate[NLVer+Ghost2LocalMap[w]] == v ) {
Mate[v-StartIndex] = w; //v is local
GMate[Ghost2LocalMap[w]] = v; //w is ghost
//Q.push_back(u);
U.push_back(v);
U.push_back(w);
myCard++;
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")MATCH: ("<<v<<","<<w<<") "; fflush(stdout);
#endif
//Decrement the counter:
//Start: PARALLEL_PROCESS_CROSS_EDGE_B(v,w)
if ( Counter[Ghost2LocalMap[w]] > 0 ) {
Counter[Ghost2LocalMap[w]] = Counter[Ghost2LocalMap[w]] - 1; //Decrement
if ( Counter[Ghost2LocalMap[w]] == 0 ) {
S--; //Decrement S
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Decrementing S: Ghost vertex "<<w<<" has received all its messages";
fflush(stdout);
#endif
}
} //End of if Counter[w] > 0
//End: PARALLEL_PROCESS_CROSS_EDGE_B(v,w)
} //End of if CandidateMate[w] = v
} //End of if a Ghost Vertex
else { //w is a local vertex
if ( candidateMate[w-StartIndex] == v ) {
Mate[v-StartIndex] = w; //v is local
Mate[w-StartIndex] = v; //w is local
//Q.push_back(u);
U.push_back(v);
U.push_back(w);
myCard++;
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")MATCH: ("<<v<<","<<w<<") "; fflush(stdout);
#endif
} //End of if(CandidateMate(w) = v
} //End of Else
} //End of if(w >=0)
else { //no dominating edge found: w == -1
adj11 = verLocPtr[v-StartIndex];
adj12 = verLocPtr[v-StartIndex+1];
for( k1 = adj11; k1 < adj12; k1++ ) {
w = verLocInd[k1];
if ( (w < StartIndex) || (w > EndIndex) ) { //A ghost
//Build the Message Packet:
Message[0] = v; //LOCAL
Message[1] = w; //GHOST
Message[2] = FAILURE; //TYPE
//Send a Request (Asynchronous)
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Sending a failure message: ";
cout<<"\n("<<myRank<<")Ghost is "<<w<<" Owner is: "<<findOwnerOfGhost(w, verDistance, myRank, numProcs);
fflush(stdout);
#endif
ghostOwner = findOwnerOfGhost(w, verDistance, myRank, numProcs); assert(ghostOwner != -1); assert(ghostOwner != myRank);
MPI_Bsend(&Message[0], 3, TypeMap<MilanLongInt>(), ghostOwner, ComputeTag, comm);
msgInd++; msgActual++;
} //End of if(GHOST)
} //End of for loop
} // End of Else: w == -1
//End: PARALLEL_PROCESS_EXPOSED_VERTEX_B(v)
} //End of If (candidateMate[v-StartIndex] == u)
} //End of if ( (v >= StartIndex) && (v <= EndIndex) ) //If Local Vertex:
else { //Neighbor v is a ghost vertex
if ( candidateMate[NLVer+Ghost2LocalMap[v]] == u )
candidateMate[NLVer+Ghost2LocalMap[v]] = -1;
if ( v != Mate[u-StartIndex] ) { //u is a local vertex
//Build the Message Packet:
Message[0] = u; //LOCAL
Message[1] = v; //GHOST
Message[2] = SUCCESS; //TYPE
//Send a Request (Asynchronous)
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Sending a success message: ";
cout<<"\n("<<myRank<<")Ghost is "<<v<<" Owner is: "<<findOwnerOfGhost(v, verDistance, myRank, numProcs);
fflush(stdout);
#endif
ghostOwner = findOwnerOfGhost(v, verDistance, myRank, numProcs); assert(ghostOwner != -1); assert(ghostOwner != myRank);
MPI_Bsend(&Message[0], 3, TypeMap<MilanLongInt>(), ghostOwner, ComputeTag, comm);
msgInd++; msgActual++;
#ifdef DEBUG_GHOST_
if ((u<StartIndex) || (u>EndIndex)) {
cout<<"\n("<<myRank<<") "<<__LINE__<<" From Send: should not happen: u= "<<u<<" v= "<<v<<
" StartIndex "<<StartIndex<<" EndIndex "<<EndIndex<<endl;
fflush(stdout);
}
#endif
} //End of If( v != Mate[u] )
} //End of Else //A Ghost Vertex
} //End of For Loop adj(u)
} //End of if ( (u >= StartIndex) && (u <= EndIndex) ) //Process Only If a Local Vertex
} //End of while ( /*!Q.empty()*/ !U.empty() )
///////////////////////// END OF PROCESS MATCHED VERTICES /////////////////////////
//// BREAK IF NO MESSAGES EXPECTED /////////
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Deciding whether to break: S= "<<S<<endl;
#endif
if ( S == 0 ) {
#ifdef DEBUG_HANG_
cout<<"\n("<<myRank<<") Breaking out" <<endl; fflush(stdout);
#endif
break;
}
///////////////////////////////////////////////////////////////////////////////////
/////////////////////////// PROCESS MESSAGES //////////////////////////////////////
///////////////////////////////////////////////////////////////////////////////////
/*
RECEIVE message ( u, v, message_type );
// u is a GHOST vertex ... v is a LOCAL vertex
*/
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<"=========================************==============================="<<endl; fflush(stdout);
fflush(stdout);
#endif
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")About to begin Message processing phase ... S="<<S<<endl;
fflush(stdout);
#endif
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<"=========================************==============================="<<endl; fflush(stdout);
fflush(stdout);
#endif
//BLOCKING RECEIVE:
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<" Waiting for blocking receive..."<<endl; fflush(stdout);
fflush(stdout);
#endif
error_codeC = MPI_Recv(&Message[0], 3, TypeMap<MilanLongInt>(), MPI_ANY_SOURCE, ComputeTag, comm, &computeStatus);
if (error_codeC != MPI_SUCCESS ) {
MPI_Error_string(error_codeC, error_message, &message_length);
cout<<"\n*Error in call to MPI_Receive on Slave: "<<error_message<<"\n"; fflush(stdout);
}
Sender = computeStatus.MPI_SOURCE;
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Received message from Process "<<Sender<<" Type= "<<Message[2]<<endl;
fflush(stdout);
#endif
//If the Message Type is a size indicator, then receive the bigger message.
if ( Message[2] == SIZEINFO ) {
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Received bundled message from Process "<<Sender<<" Size= "<<Message[0]<<endl;
fflush(stdout);
#endif
bundleSize = Message[0]; //#of integers in the message
//Build the Message Buffer:
if (!ReceiveBuffer.empty())
ReceiveBuffer.clear(); //Empty it out first
ReceiveBuffer.resize(bundleSize, -1); //Initialize
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Message Bundle Before: "<<endl;
for (i=0; i<bundleSize; i++)
cout<<ReceiveBuffer[i]<<",";
cout<<endl;
fflush(stdout);
#endif
//Receive the message
error_codeC = MPI_Recv(&ReceiveBuffer[0], bundleSize, TypeMap<MilanLongInt>(), Sender, BundleTag, comm, &computeStatus);
if (error_codeC != MPI_SUCCESS ) {
MPI_Error_string(error_codeC, error_message, &message_length);
cout<<"\n*Error in call to MPI_Receive on processor "<<myRank<<" Error: "<<error_message<<"\n"; fflush(stdout);
}
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Message Bundle After: "<<endl;
for (i=0; i<bundleSize; i++)
cout<<ReceiveBuffer[i]<<",";
cout<<endl;
fflush(stdout);
#endif
}
else { //Just a single message:
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Received regular message from Process "<<Sender<<" u= "<<Message[0]<<" v= "<<Message[1]<<endl;
fflush(stdout);
#endif
//Add the current message to Queue:
bundleSize = 3; //#of integers in the message
//Build the Message Buffer:
if (!ReceiveBuffer.empty())
ReceiveBuffer.clear(); //Empty it out first
ReceiveBuffer.resize(bundleSize, -1); //Initialize
ReceiveBuffer[0]=Message[0]; //u
ReceiveBuffer[1]=Message[1]; //v
ReceiveBuffer[2]=Message[2]; //message_type
}
bundleCounter = 0;
while ( bundleCounter < bundleSize ) {
u = ReceiveBuffer[bundleCounter]; //GHOST
bundleCounter++;
v = ReceiveBuffer[bundleCounter]; //LOCAL
bundleCounter++;
message_type = ReceiveBuffer[bundleCounter]; //TYPE
bundleCounter++;
#ifdef DEBUG_GHOST_
if ((v<StartIndex) || (v>EndIndex)) {
cout<<"\n("<<myRank<<") From ReceiveBuffer: This should not happen: u= "<<u<<" v= "<<v<<" Type= "<<message_type<<
" StartIndex "<<StartIndex<<" EndIndex "<<EndIndex<<endl;
fflush(stdout);
}
#endif
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Processing message: u= "<<u<<" v= "<<v<<" Type= "<<message_type<<endl;
fflush(stdout);
#endif
// CASE I: REQUEST
if ( message_type == REQUEST ) {
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Message type is REQUEST"<<endl; fflush(stdout);
#endif
#ifdef DEBUG_GHOST_
if ((v<0)||(v<StartIndex) || ((v-StartIndex)>NLVer)) {
cout<<"\n("<<myRank<<") case 1 Bad address "<<v<<" "<<StartIndex<<" "<<v-StartIndex<<" "<<NLVer<<endl; fflush(stdout);
}
#endif
if ( Mate[v-StartIndex] == -1 ) { //Process only if not already matched (v is local)
candidateMate[NLVer+Ghost2LocalMap[u]] = v; //Set CandidateMate for the ghost
if ( candidateMate[v-StartIndex] == u ) {
GMate[Ghost2LocalMap[u]] = v; //u is ghost
Mate[v-StartIndex] = u; //v is local
//Q.push_back(u);
U.push_back(v);
U.push_back(u);
myCard++;
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")MATCH: ("<<v<<","<<u<<") "<<endl; fflush(stdout);
#endif
//Start: PARALLEL_PROCESS_CROSS_EDGE_B(v,u)
if ( Counter[Ghost2LocalMap[u]] > 0 ) {
Counter[Ghost2LocalMap[u]] = Counter[Ghost2LocalMap[u]] - 1; //Decrement
if ( Counter[Ghost2LocalMap[u]] == 0 ) {
S--; //Decrement S
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Decrementing S: Ghost vertex "<<u<<" has received all its messages"<<endl;
fflush(stdout);
#endif
}
} //End of if Counter[w] > 0
//End: PARALLEL_PROCESS_CROSS_EDGE_B(v,u)
} //End of if ( candidateMate[v-StartIndex] == u )e
} //End of if ( Mate[v] == -1 )
} //End of REQUEST
else { //CASE II: SUCCESS
if ( message_type == SUCCESS ) {
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Message type is SUCCESS"<<endl; fflush(stdout);
#endif
//Start: PARALLEL_PROCESS_CROSS_EDGE_B(v,u)
GMate[Ghost2LocalMap[u]] = EndIndex+1; //Set a Dummy Mate to make sure that we do not (u is a ghost)
//process it again
if ( Counter[Ghost2LocalMap[u]] > 0 ) {
Counter[Ghost2LocalMap[u]] = Counter[Ghost2LocalMap[u]] - 1; //Decrement
if ( Counter[Ghost2LocalMap[u]] == 0 ) {
S--; //Decrement S
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Decrementing S: Ghost vertex "<<u<<" has received all its messages";
fflush(stdout);
#endif
}
} //End of if Counter[w] > 0
//End: PARALLEL_PROCESS_CROSS_EDGE_B(v,u)
#ifdef DEBUG_GHOST_
if ((v<0)||(v<StartIndex) || ((v-StartIndex)>NLVer)) {
cout<<"\n("<<myRank<<") case 2 Bad address "<<v<<" "<<StartIndex<<" "<<v-StartIndex<<" "<<NLVer<<endl; fflush(stdout);
}
#endif
if ( Mate[v-StartIndex] == -1 ) { //Process only if not already matched ( v is local)
if ( candidateMate[v-StartIndex] == u ) {
//Start: PARALLEL_PROCESS_EXPOSED_VERTEX_B(v)
//Start: PARALLEL_COMPUTE_CANDIDATE_MATE_B(v)
adj11 = verLocPtr[v-StartIndex];
adj12 = verLocPtr[v-StartIndex+1];
w = -1;
heaviestEdgeWt = MilanRealMin; //Assign the smallest Value possible first LDBL_MIN
for( k1 = adj11; k1 < adj12; k1++ ) {
if ( (verLocInd[k1]<StartIndex) || (verLocInd[k1]>EndIndex) ) { //Is it a ghost vertex?
if(GMate[Ghost2LocalMap[verLocInd[k1]]] >= 0 )// Already matched
continue;
}
else { //A local vertex
if( Mate[verLocInd[k1]-StartIndex] >= 0 ) // Already matched
continue;
}
if( (edgeLocWeight[k1] > heaviestEdgeWt) ||
((edgeLocWeight[k1] == heaviestEdgeWt)&&(w < verLocInd[k1])) ) {
heaviestEdgeWt = edgeLocWeight[k1];
w = verLocInd[k1];
}
} //End of for loop
candidateMate[v-StartIndex] = w;
//End: PARALLEL_COMPUTE_CANDIDATE_MATE_B(v)
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")"<<v<<" Points to: "<<w<<endl; fflush(stdout);
#endif
//If found a dominating edge:
if ( w >= 0 ) {
if ( (w < StartIndex) || (w > EndIndex) ) { //w is a ghost
//Build the Message Packet:
Message[0] = v; //LOCAL
Message[1] = w; //GHOST
Message[2] = REQUEST; //TYPE
//Send a Request (Asynchronous)
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Sending a request message: ";
cout<<"\n("<<myRank<<")Ghost is "<<w<<" Owner is: "<<findOwnerOfGhost(w, verDistance, myRank, numProcs)<<endl;
fflush(stdout);
#endif
ghostOwner = findOwnerOfGhost(w, verDistance, myRank, numProcs); assert(ghostOwner != -1); assert(ghostOwner != myRank);
MPI_Bsend(&Message[0], 3, TypeMap<MilanLongInt>(), ghostOwner, ComputeTag, comm);
msgInd++; msgActual++;
if ( candidateMate[NLVer+Ghost2LocalMap[w]] == v ) {
Mate[v-StartIndex] = w; //v is local
GMate[Ghost2LocalMap[w]] = v; //w is ghost
//Q.push_back(u);
U.push_back(v);
U.push_back(w);
myCard++;
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")MATCH: ("<<v<<","<<w<<") "<<endl; fflush(stdout);
#endif
//Decrement the counter:
//Start: PARALLEL_PROCESS_CROSS_EDGE_B(v,w)
if ( Counter[Ghost2LocalMap[w]] > 0 ) {
Counter[Ghost2LocalMap[w]] = Counter[Ghost2LocalMap[w]] - 1; //Decrement
if ( Counter[Ghost2LocalMap[w]] == 0 ) {
S--; //Decrement S
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Decrementing S: Ghost vertex "<<w<<" has received all its messages";
fflush(stdout);
#endif
}
} //End of if Counter[w] > 0
//End: PARALLEL_PROCESS_CROSS_EDGE_B(v,w)
} //End of if CandidateMate[w] = v
} //End of if a Ghost Vertex
else { //w is a local vertex
if ( candidateMate[w-StartIndex] == v ) {
Mate[v-StartIndex] = w; //v is local
Mate[w-StartIndex] = v; //w is local
//Q.push_back(u);
U.push_back(v);
U.push_back(w);
myCard++;
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")MATCH: ("<<v<<","<<w<<") "<<endl; fflush(stdout);
#endif
} //End of if(CandidateMate(w) = v
} //End of Else
} //End of if(w >=0)
else { //No dominant edge found
adj11 = verLocPtr[v-StartIndex];
adj12 = verLocPtr[v-StartIndex+1];
for( k1 = adj11; k1 < adj12; k1++ ) {
w = verLocInd[k1];
if ( (w < StartIndex) || (w > EndIndex) ) { //A ghost
//Build the Message Packet:
Message[0] = v; //LOCAL
Message[1] = w; //GHOST
Message[2] = FAILURE; //TYPE
//Send a Request (Asynchronous)
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Sending a failure message: ";
cout<<"\n("<<myRank<<")Ghost is "<<w<<" Owner is: "<<findOwnerOfGhost(w, verDistance, myRank, numProcs)<<endl;
fflush(stdout);
#endif
//MPI_Bsend(&Message[0], 3, MilanMpiLongInt, findOwnerOfGhost(w, verDistance, myRank, numProcs),
ghostOwner = findOwnerOfGhost(w, verDistance, myRank, numProcs); assert(ghostOwner != -1); assert(ghostOwner != myRank);
MPI_Bsend(&Message[0], 3, TypeMap<MilanLongInt>(), ghostOwner, ComputeTag, comm);
msgInd++; msgActual++;
} //End of if(GHOST)
} //End of for loop
} // End of Else: w == -1
//End: PARALLEL_PROCESS_EXPOSED_VERTEX_B(v)
} //End of if ( candidateMate[v-StartIndex] == u )
} //End of if ( Mate[v] == -1 )
} //End of if ( message_type == SUCCESS )
else { //CASE III: FAILURE
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Message type is FAILURE"<<endl; fflush(stdout);
#endif
//Start: PARALLEL_PROCESS_CROSS_EDGE_B(v,u)
GMate[Ghost2LocalMap[u]] = EndIndex+1; //Set a Dummy Mate to make sure that we do not (u is a ghost)
//process it again
if ( Counter[Ghost2LocalMap[u]] > 0 ) {
Counter[Ghost2LocalMap[u]] = Counter[Ghost2LocalMap[u]] - 1; //Decrement
if ( Counter[Ghost2LocalMap[u]] == 0 ) {
S--; //Decrement S
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Decrementing S: Ghost vertex "<<u<<" has received all its messages";
fflush(stdout);
#endif
}
} //End of if Counter[w] > 0
//End: PARALLEL_PROCESS_CROSS_EDGE_B(v,u)
} //End of else: CASE III
} //End of else: CASE I
} //End of if (!MsgQ.empty())
///////////////////////// END OF PROCESS MESSAGES /////////////////////////////////
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Finished Message processing phase: S= "<<S; fflush(stdout);
cout<<"\n("<<myRank<<")** SENT : ACTUAL= "<<msgActual; fflush(stdout);
cout<<"\n("<<myRank<<")** SENT : INDIVIDUAL= "<<msgInd<<endl; fflush(stdout);
#endif
} //End of while (true)
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<") Waitall= "<<endl; fflush(stdout);
#endif
#ifdef DEBUG_HANG_
cout<<"\n("<<myRank<<") Waitall " <<endl; fflush(stdout);
#endif
//MPI_Barrier(comm);
//Cleanup Phase
MPI_Waitall(MessageIndex, &SRequest[0], &SStatus[0]);
//MPI_Buffer_attach(&Buffer, BufferSize); //Attach the Buffer
if ( BufferSize > 0 ) {
MPI_Buffer_detach(&Buffer, &BufferSize); //Detach the Buffer
free(Buffer); //Free the memory that was allocated
}
finishTime = MPI_Wtime();
*ph2_time = finishTime-startTime; //Time taken for Phase-2
*ph2_card = myCard ; //Cardinality at the end of Phase-2
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")End of function to compute matching: "<<endl; fflush(stdout);
cout<<"\n("<<myRank<<")myCardinality: "<<myCard<<endl; fflush(stdout);
cout<<"\n("<<myRank<<")Matching took "<<finishTime-startTime<<"seconds"<<endl; fflush(stdout);
cout<<"\n("<<myRank<<")** Getting out of the matching function **"<<endl; fflush(stdout);
#endif
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<") Number of Ghost edges = "<<numGhostEdges;
cout<<"\n("<<myRank<<") Total number of potential message X 2 = "<<numGhostEdges*2;
cout<<"\n("<<myRank<<") Number messages bundled = "<<NumMessagesBundled;
cout<<"\n("<<myRank<<") Total Individual Messages sent = "<< msgInd;
if (msgInd>0) {
cout<<"\n("<<myRank<<") Percentage of messages bundled = "<<((double)NumMessagesBundled/(double)(msgInd))*100.0<<"% \n";
}
fflush(stdout);
#endif
*msgActualSent = msgActual;
*msgIndSent = msgInd;
if (msgInd > 0) {
*msgPercent = ((double)NumMessagesBundled/(double)(msgInd))*100.0;
} else {
*msgPercent = 0;
}
#ifdef DEBUG_HANG_
if (myRank == 0) cout<<"\n("<<myRank<<") Done" <<endl; fflush(stdout);
#endif
//MPI_Barrier(comm);
}
//End of algoDistEdgeApproxDomEdgesLinearSearchMesgBndlSmallMate
// SINGLE PRECISION VERSION
void salgoDistEdgeApproxDomEdgesLinearSearchMesgBndlSmallMateC(
MilanLongInt NLVer, MilanLongInt NLEdge,
MilanLongInt* verLocPtr, MilanLongInt* verLocInd,
MilanFloat* edgeLocWeight,
MilanLongInt* verDistance,
MilanLongInt* Mate,
MilanInt myRank, MilanInt numProcs, MPI_Comm comm,
MilanLongInt* msgIndSent, MilanLongInt* msgActualSent,
MilanReal* msgPercent,
MilanReal* ph0_time, MilanReal* ph1_time, MilanReal* ph2_time,
MilanLongInt* ph1_card, MilanLongInt* ph2_card ) {
#if !defined(SERIAL_MPI)
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Within algoEdgeApproxDominatingEdgesLinearSearchMessageBundling()"; fflush(stdout);
#endif
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<") verDistance ["<< verDistance[0] << "," << verDistance[1] << "," << verDistance[2] <<"," << verDistance[3] <<"]"; fflush(stdout);
#endif
#ifdef DEBUG_HANG_
if (myRank == 0) cout<<"\n("<<myRank<<") verDistance ["<< verDistance[0] << "," << verDistance[1] << "," << verDistance[2] <<"," << verDistance[3] <<"]"; fflush(stdout);
#endif
//inputSubGraph.getStartEndIndices(StartIndex, EndIndex);
MilanLongInt StartIndex = verDistance[myRank]; //The starting vertex owned by the current rank
//MilanLongInt EndIndex = verDistance[myRank+1]; //The ending vertex owned by the current rank
MilanLongInt EndIndex = verDistance[myRank+1]-1; //The ending vertex owned by the current rank
MPI_Status computeStatus;
const int ComputeTag = 7; //Predefined tag
const int BundleTag = 9; //Predefined tag
int error_codeC;
error_codeC = MPI_Comm_set_errhandler(MPI_COMM_WORLD, MPI_ERRORS_RETURN);
char error_message[MPI_MAX_ERROR_STRING];
int message_length;
//MilanLongInt NLVer=0, NLEdge=0, StartIndex=0, EndIndex=0;
MilanLongInt msgActual=0, msgInd=0;
MilanFloat heaviestEdgeWt=0.0f; //Assumes positive weight
MilanReal startTime, finishTime;
//MilanReal Precision = MPI_Wtick(); //Get the precision of the MPI Timer
startTime = MPI_Wtime();
//Get the iterators for the graph:
//vector<MilanLongInt>::iterator verLocPtr = inputSubGraph.getVerPtr_b();
//vector<MilanLongInt>::iterator verLocInd = inputSubGraph.getVerInd_b();
//vector<MilanReal>::iterator edgeLocWeight = inputSubGraph.getEdgeWt_b();
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")NV: "<<NLVer<<" Edges: "<<NLEdge; fflush(stdout);
cout<<"\n("<<myRank<<")StartIndex: "<<StartIndex<<" EndIndex: "<<EndIndex; fflush(stdout);
#endif
//Other Variables:
MilanLongInt u=-1, v=-1, w=-1, i=0;
MilanLongInt k=-1, adj1=-1, adj2=-1;
MilanLongInt k1=-1, adj11=-1, adj12=-1;
MilanLongInt myCard = 0;
MilanInt Sender=0; // This is the rank of the sending nodes, it has to be an integer! Fabio
//Build the Ghost Vertex Set: Vg
map<MilanLongInt, MilanLongInt> Ghost2LocalMap; //Map each ghost vertex to a local vertex
// index that starts with zero to |Vg| - 1
map<MilanLongInt, MilanLongInt>::iterator storedAlready;
vector<MilanLongInt> Counter; //Store the edge count for each ghost vertex
MilanLongInt numGhostVertices = 0, numGhostEdges = 0, insertMe=0; //Number of Ghost vertices
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")About to compute Ghost Vertices..."; fflush(stdout);
#endif
#ifdef DEBUG_HANG_
if (myRank == 0) cout<<"\n("<<myRank<<")About to compute Ghost Vertices..."; fflush(stdout);
#endif
for ( i=0; i<NLEdge; i++ ) { //O(m) - Each edge stored twice
insertMe = verLocInd[i];
//cout<<"InsertMe on Process "<<myRank<<" is: "<<insertMe<<endl;
if ( (insertMe < StartIndex) || (insertMe > EndIndex) ) { //Find a ghost
storedAlready = Ghost2LocalMap.find( insertMe );
if ( storedAlready != Ghost2LocalMap.end() ) { //Has already been added
//cout<<"Process "<<myRank<<" found: "<<storedAlready->first<<" - "<<storedAlready->second<<endl;
Counter[storedAlready->second]++; //Increment the counter
numGhostEdges++;
} else { //Insert an entry for the ghost:
//cout<<"Process "<<myRank<<" * New insert: Key="<<insertMe<< " : Value="<<numGhostVertices<<endl;
Ghost2LocalMap[insertMe] = numGhostVertices; //Add a map entry
Counter.push_back(1); //Initialize the counter
numGhostEdges++;
numGhostVertices++; //Increment the number of ghost vertices
} //End of else()
} //End of if ( (insertMe < StartIndex) || (insertMe > EndIndex) )
} //End of for(ghost vertices)
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")NGhosts:" << numGhostVertices << " GhostEdges: "<<numGhostEdges;
if (!Ghost2LocalMap.empty()) {
cout<<"\n("<<myRank<<")Final Map : on process ";
cout<<"\n("<<myRank<<")Key \t Value \t Counter \n"; fflush(stdout);
storedAlready = Ghost2LocalMap.begin();
do {
cout<<storedAlready->second<<" - "<<storedAlready->first<<" : "<<Counter[storedAlready->second]<<endl;
fflush(stdout);
storedAlready++;
} while ( storedAlready != Ghost2LocalMap.end() );
}
#endif
//Build Adjacency Lists for Ghost Vertices:
//cout<<"Building Ghost data structures ... \n\n";
vector<MilanLongInt> verGhostPtr, verGhostInd, tempCounter;
//Mate array for ghost vertices:
vector<MilanLongInt> GMate; //Proportional to the number of ghost vertices
try {
verGhostPtr.reserve(numGhostVertices+1); //Pointer Vector
tempCounter.reserve(numGhostVertices); //Pointer Vector
verGhostInd.reserve(numGhostEdges); //Index Vector
GMate.reserve(numGhostVertices); //Ghost Mate Vector
} catch ( length_error ) {
cout<<"Error in function algoDistEdgeApproxDominatingEdgesLinearSearch: \n";
cout<<"Not enough memory to allocate the internal variables \n";
exit(1);
}
//Initialize the Vectors:
verGhostPtr.resize(numGhostVertices+1, 0); //Pointer Vector
tempCounter.resize(numGhostVertices, 0); //Temporary Counter
verGhostInd.resize(numGhostEdges, -1); //Index Vector
GMate.resize(numGhostVertices, -1); //Temporary Counter
verGhostPtr[0] = 0; //The first value
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Ghost Vertex Pointer: "; fflush(stdout);
#endif
for ( i=0; i<numGhostVertices; i++ ) { //O(|Ghost Vertices|)
verGhostPtr[i+1] = verGhostPtr[i] + Counter[i];
#ifdef PRINT_DEBUG_INFO_
cout<<verGhostPtr[i]<<"\t"; fflush(stdout);
#endif
}
#ifdef PRINT_DEBUG_INFO_
if ( numGhostVertices > 0 )
cout<<verGhostPtr[numGhostVertices]<<"\n";
fflush(stdout);
#endif
for ( v=0; v < NLVer; v++ ) {
adj1 = verLocPtr[v]; //Vertex Pointer
adj2 = verLocPtr[v+1];
for( k = adj1; k < adj2; k++ ) {
w = verLocInd[k]; //Get the adjacent vertex
if ( (w < StartIndex) || (w > EndIndex) ) { //Find a ghost
insertMe = verGhostPtr[Ghost2LocalMap[w]] + tempCounter[Ghost2LocalMap[w]]; //Where to insert
verGhostInd[insertMe] = v+StartIndex; //Add the adjacency
tempCounter[Ghost2LocalMap[w]]++; //Increment the counter
} //End of if((w < StartIndex) || (w > EndIndex))
} //End of for(k)
} //End of for (v)
tempCounter.clear(); //Do not need this any more
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Ghost Vertex Index: ";
for ( v=0; v < numGhostEdges; v++ )
cout<<verGhostInd[v]<<"\t";
cout<<endl; fflush(stdout);
#endif
//Data structures for sending and receiving messages:
vector<MilanLongInt> Message; // [ u, v, message_type ]
Message.resize(3,-1);
const MilanLongInt REQUEST = 1;
const MilanLongInt SUCCESS = 2;
const MilanLongInt FAILURE = 3;
const MilanLongInt SIZEINFO = 4;
MilanLongInt message_type = 0;
//Data structures for Message Bundling:
//Although up to two messages can be sent along any cross edge,
//only one message will be sent in the initialization phase -
//one of: REQUEST/FAILURE/SUCCESS
vector<MilanLongInt> QLocalVtx, QGhostVtx, QMsgType;
vector<MilanInt> QOwner; // Changed by Fabio to be an integer, addresses needs to be integers!
vector<MilanLongInt> PCounter;
MilanLongInt NumMessagesBundled=0;
MilanInt ghostOwner=0; // Changed by Fabio to be an integer, addresses needs to be integers!
try {
QLocalVtx.reserve(numGhostEdges); //Local Vertex
QGhostVtx.reserve(numGhostEdges); //Ghost Vertex
QMsgType.reserve(numGhostEdges); //Message Type (Request/Failure)
QOwner.reserve(numGhostEdges); //Owner of the ghost: COmpute once and use later
PCounter.reserve( numProcs); //Store How many messages will be sent to each processor
} catch ( length_error ) {
cout<<"Error in function algoDistEdgeApproxDominatingEdgesMessageBundling: \n";
cout<<"Not enough memory to allocate the internal variables \n";
exit(1);
}
PCounter.resize(numProcs, 0); //Only initialize the counter variable
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Allocating CandidateMate.. "; fflush(stdout);
#endif
//Allocate Data Structures:
vector<MilanLongInt> candidateMate;
try {
candidateMate.reserve(NLVer+numGhostVertices); //Dominating edge
} catch ( length_error ) {
cout<<"Error in function algoDistEdgeApproxDominatingEdgesLinearSearch: \n";
cout<<"Not enough memory to allocate the internal variables \n";
exit(1);
}
//Initialize the Vectors:
candidateMate.resize(NLVer+numGhostVertices, -1);
//The Queue Data Structure for the Dominating Set:
staticQueue U(NLVer+numGhostVertices); //Max size is the number of vertices
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<"=========================************==============================="<<endl; fflush(stdout);
fflush(stdout);
#endif
//MPI_Barrier(comm);
finishTime = MPI_Wtime();
*ph0_time = finishTime-startTime; //Time taken for Phase-0: Initialization
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<") Setup Time :"<< *ph0_time <<endl; fflush(stdout);
fflush(stdout);
#endif
#ifdef DEBUG_HANG_
if (myRank == 0) cout<<"\n("<<myRank<<") Setup Time :"<< *ph0_time <<endl; fflush(stdout);
#endif
startTime = MPI_Wtime();
/////////////////////////////////////////////////////////////////////////////////////////
//////////////////////////////////// INITIALIZATION /////////////////////////////////////
/////////////////////////////////////////////////////////////////////////////////////////
//Compute the Initial Matching Set:
MilanLongInt S = numGhostVertices; //Initialize S with number of Ghost Vertices
for ( v=0; v < NLVer; v++ ) {
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Processing: "<<v+StartIndex<<endl; fflush(stdout);
#endif
//Start: PARALLEL_PROCESS_EXPOSED_VERTEX_B(v)
//Start: PARALLEL_COMPUTE_CANDIDATE_MATE_B(v)
adj1 = verLocPtr[v];
adj2 = verLocPtr[v+1];
w = -1;
heaviestEdgeWt = MilanFloatMin; //Assign the smallest Value possible first LDBL_MIN
for( k = adj1; k < adj2; k++ ) {
if ( (verLocInd[k]<StartIndex) || (verLocInd[k]>EndIndex) ) { //Is it a ghost vertex?
if(GMate[Ghost2LocalMap[verLocInd[k]]] >= 0 )// Already matched
continue;
} else { //A local vertex
if( Mate[verLocInd[k]-StartIndex] >= 0 ) // Already matched
continue;
}
if( (edgeLocWeight[k] > heaviestEdgeWt) ||
((edgeLocWeight[k] == heaviestEdgeWt)&&(w < verLocInd[k])) ) {
heaviestEdgeWt = edgeLocWeight[k];
w = verLocInd[k];
}
} //End of for loop
candidateMate[v] = w;
//End: PARALLEL_COMPUTE_CANDIDATE_MATE_B(v)
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")"<<v+StartIndex<<" Points to: "<<w; fflush(stdout);
#endif
//If found a dominating edge:
if ( w >= 0 ) {
if ( (w < StartIndex) || (w > EndIndex) ) { //w is a ghost vertex
//Build the Message Packet:
//Message[0] = v+StartIndex; //LOCAL
//Message[1] = w; //GHOST
//Message[2] = REQUEST; //TYPE
//Send a Request (Asynchronous)
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Sending a request message (291):";
cout<<"\n("<<myRank<<")Local is: "<<v+StartIndex<<" Ghost is "<<w<<" Owner is: "<< findOwnerOfGhost(w, verDistance, myRank, numProcs) <<endl;
fflush(stdout);
#endif
/* MPI_Bsend(&Message[0], 3, MPI_INT, inputSubGraph.findOwner(w),
ComputeTag, comm);*/
QLocalVtx.push_back(v+StartIndex);
QGhostVtx.push_back(w);
QMsgType.push_back(REQUEST);
//ghostOwner = inputSubGraph.findOwner(w);
ghostOwner = findOwnerOfGhost(w, verDistance, myRank, numProcs); assert(ghostOwner != -1); assert(ghostOwner != myRank);
QOwner.push_back(ghostOwner);
PCounter[ghostOwner]++;
NumMessagesBundled++;
msgInd++;
if ( candidateMate[NLVer+Ghost2LocalMap[w]] == v+StartIndex ) {
Mate[v] = w;
GMate[Ghost2LocalMap[w]]=v+StartIndex; //w is a Ghost
//Q.push_back(u);
U.push_back(v+StartIndex);
U.push_back(w);
myCard++;
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")MATCH: ("<<v+StartIndex<<","<<w<<")"; fflush(stdout);
#endif
//Decrement the counter:
//Start: PARALLEL_PROCESS_CROSS_EDGE_B(v)
if ( Counter[Ghost2LocalMap[w]] > 0 ) {
Counter[Ghost2LocalMap[w]] = Counter[Ghost2LocalMap[w]] - 1; //Decrement
if ( Counter[Ghost2LocalMap[w]] == 0 ) {
S--; //Decrement S
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Decrementing S: Ghost vertex "<<w<<" has received all its messages";
fflush(stdout);
#endif
}
} //End of if Counter[w] > 0
//End: PARALLEL_PROCESS_CROSS_EDGE_B(v)
} //End of if CandidateMate[w] = v
} //End of if a Ghost Vertex
else { // w is a local vertex
if ( candidateMate[w-StartIndex] == (v+StartIndex) ) {
Mate[v] = w; //v is local
Mate[w-StartIndex] = v+StartIndex; //w is local
//Q.push_back(u);
U.push_back(v+StartIndex);
U.push_back(w);
myCard++;
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")MATCH: ("<<v+StartIndex<<","<<w<<") "; fflush(stdout);
#endif
} //End of if ( candidateMate[w-StartIndex] == (v+StartIndex) )
} //End of Else
} //End of if(w >=0)
else {
adj11 = verLocPtr[v];
adj12 = verLocPtr[v+1];
for( k1 = adj11; k1 < adj12; k1++ ) {
w = verLocInd[k1];
if ( (w < StartIndex) || (w > EndIndex) ) { //A ghost
//Build the Message Packet:
//Message[0] = v+StartIndex; //LOCAL
//Message[1] = w; //GHOST
//Message[2] = FAILURE; //TYPE
//Send a Request (Asynchronous)
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Sending a failure message: ";
cout<<"\n("<<myRank<<")Ghost is "<<w<<" Owner is: "<<findOwnerOfGhost(w, verDistance, myRank, numProcs);
fflush(stdout);
#endif
/* MPI_Bsend(&Message[0], 3, MPI_INT, inputSubGraph.findOwner(w),
ComputeTag, comm); */
QLocalVtx.push_back(v+StartIndex);
QGhostVtx.push_back(w);
QMsgType.push_back(FAILURE);
//ghostOwner = inputSubGraph.findOwner(w);
ghostOwner = findOwnerOfGhost(w, verDistance, myRank, numProcs); assert(ghostOwner != -1); assert(ghostOwner != myRank);
QOwner.push_back(ghostOwner);
PCounter[ghostOwner]++;
NumMessagesBundled++;
msgInd++;
} //End of if(GHOST)
} //End of for loop
} // End of Else: w == -1
//End: PARALLEL_PROCESS_EXPOSED_VERTEX_B(v)
} //End of for ( v=0; v < NLVer; v++ )
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<"=========================************==============================="<<endl; fflush(stdout);
fflush(stdout);
#endif
///////////////////////////////////////////////////////////////////////////////////
/////////////////////////// PROCESS MATCHED VERTICES //////////////////////////////
///////////////////////////////////////////////////////////////////////////////////
while ( /*!Q.empty()*/ !U.empty() ) {
//Q.pop_front();
u = U.pop_front(); //Get an element from the queue
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")u: "<<u; fflush(stdout);
#endif
if ( (u >= StartIndex) && (u <= EndIndex) ) { //Process Only the Local Vertices
//Get the Adjacency list for u
adj1 = verLocPtr[u-StartIndex]; //Pointer
adj2 = verLocPtr[u-StartIndex+1];
for( k = adj1; k < adj2; k++ ) {
v = verLocInd[k];
if ( (v >= StartIndex) && (v <= EndIndex) ) { //If Local Vertex:
if ( (v<StartIndex) || (v>EndIndex) ) { //Is it a ghost vertex?
if(GMate[Ghost2LocalMap[v]] >= 0 )// Already matched
continue;
} else { //A local vertex
if( Mate[v-StartIndex] >= 0 ) // Already matched
continue;
} //End of else
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")v: "<<v<<" c(v)= "<<candidateMate[v-StartIndex]<<" Mate[v]: "<<Mate[v];
fflush(stdout);
#endif
if ( candidateMate[v-StartIndex] == u ) { //Only if pointing to the matched vertex
//Start: PARALLEL_PROCESS_EXPOSED_VERTEX_B(v)
//Start: PARALLEL_COMPUTE_CANDIDATE_MATE_B(v)
adj11 = verLocPtr[v-StartIndex];
adj12 = verLocPtr[v-StartIndex+1];
w = -1;
heaviestEdgeWt = MilanFloatMin; //Assign the smallest Value possible first LDBL_MIN
for( k1 = adj11; k1 < adj12; k1++ ) {
if ( (verLocInd[k1]<StartIndex) || (verLocInd[k1]>EndIndex) ) { //Is it a ghost vertex?
if(GMate[Ghost2LocalMap[verLocInd[k1]]] >= 0 )// Already matched
continue;
} else { //A local vertex
if( Mate[verLocInd[k1]-StartIndex] >= 0 ) // Already matched
continue;
}
if( (edgeLocWeight[k1] > heaviestEdgeWt) ||
((edgeLocWeight[k1] == heaviestEdgeWt)&&(w < verLocInd[k1])) ) {
heaviestEdgeWt = edgeLocWeight[k1];
w = verLocInd[k1];
}
} //End of for loop
candidateMate[v-StartIndex] = w;
//End: PARALLEL_COMPUTE_CANDIDATE_MATE_B(v)
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")"<<v<<" Points to: "<<w; fflush(stdout);
#endif
//If found a dominating edge:
if ( w >= 0 ) {
if ( (w < StartIndex) || (w > EndIndex) ) { //A ghost
//Build the Message Packet:
//Message[0] = v; //LOCAL
//Message[1] = w; //GHOST
//Message[2] = REQUEST; //TYPE
//Send a Request (Asynchronous)
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Sending a request message:";
cout<<"\n("<<myRank<<")Ghost is "<<w<<" Owner is: "<<findOwnerOfGhost(w, verDistance, myRank, numProcs);
#endif
/*MPI_Bsend(&Message[0], 3, MPI_INT, inputSubGraph.findOwner(w),
ComputeTag, comm);*/
QLocalVtx.push_back(v);
QGhostVtx.push_back(w);
QMsgType.push_back(REQUEST);
//ghostOwner = inputSubGraph.findOwner(w);
ghostOwner = findOwnerOfGhost(w, verDistance, myRank, numProcs); assert(ghostOwner != -1); assert(ghostOwner != myRank);
QOwner.push_back(ghostOwner);
PCounter[ghostOwner]++;
NumMessagesBundled++;
msgInd++;
if ( candidateMate[NLVer+Ghost2LocalMap[w]] == v ) {
Mate[v-StartIndex] = w; //v is a local vertex
GMate[Ghost2LocalMap[w]] = v; //w is a ghost vertex
//Q.push_back(u);
U.push_back(v);
U.push_back(w);
myCard++;
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")MATCH: ("<<v<<","<<w<<") "; fflush(stdout);
#endif
//Decrement the counter:
//Start: PARALLEL_PROCESS_CROSS_EDGE_B(v,w)
if ( Counter[Ghost2LocalMap[w]] > 0 ) {
Counter[Ghost2LocalMap[w]] = Counter[Ghost2LocalMap[w]] - 1; //Decrement
if ( Counter[Ghost2LocalMap[w]] == 0 ) {
S--; //Decrement S
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Decrementing S: Ghost vertex "<<w<<" has received all its messages";
fflush(stdout);
#endif
}
} //End of if Counter[w] > 0
//End: PARALLEL_PROCESS_CROSS_EDGE_B(v,w)
} //End of if CandidateMate[w] = v
} //End of if a Ghost Vertex
else { //w is a local vertex
if ( candidateMate[w-StartIndex] == v ) {
Mate[v-StartIndex] = w; //v is a local vertex
Mate[w-StartIndex] = v; //w is a local vertex
//Q.push_back(u);
U.push_back(v);
U.push_back(w);
myCard++;
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")MATCH: ("<<v<<","<<w<<") "; fflush(stdout);
#endif
} //End of if(CandidateMate(w) = v
} //End of Else
} //End of if(w >=0)
else {
adj11 = verLocPtr[v-StartIndex];
adj12 = verLocPtr[v-StartIndex+1];
for( k1 = adj11; k1 < adj12; k1++ ) {
w = verLocInd[k1];
if ( (w < StartIndex) || (w > EndIndex) ) { //A ghost
//Build the Message Packet:
//Message[0] = v; //LOCAL
//Message[1] = w; //GHOST
//Message[2] = FAILURE; //TYPE
//Send a Request (Asynchronous)
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Sending a failure message: ";
cout<<"\n("<<myRank<<")Ghost is "<<w<<" Owner is: "<<findOwnerOfGhost(w, verDistance, myRank, numProcs);
fflush(stdout);
#endif
/* MPI_Bsend(&Message[0], 3, MPI_INT, inputSubGraph.findOwner(w),
ComputeTag, comm); */
QLocalVtx.push_back(v);
QGhostVtx.push_back(w);
QMsgType.push_back(FAILURE);
//ghostOwner = inputSubGraph.findOwner(w);
ghostOwner = findOwnerOfGhost(w, verDistance, myRank, numProcs); assert(ghostOwner != -1); assert(ghostOwner != myRank);
QOwner.push_back(ghostOwner);
PCounter[ghostOwner]++;
NumMessagesBundled++;
msgInd++;
} //End of if(GHOST)
} //End of for loop
} // End of Else: w == -1
//End: PARALLEL_PROCESS_EXPOSED_VERTEX_B(v)
} //End of If (candidateMate[v-StartIndex] == u)
} //End of if ( (v >= StartIndex) && (v <= EndIndex) ) //If Local Vertex:
else { //Neighbor is a ghost vertex
if ( candidateMate[NLVer+Ghost2LocalMap[v]] == u )
candidateMate[NLVer+Ghost2LocalMap[v]] = -1;
if ( v != Mate[u-StartIndex] ) { //u is local
//Build the Message Packet:
//Message[0] = u; //LOCAL
//Message[1] = v; //GHOST
//Message[2] = SUCCESS; //TYPE
//Send a Request (Asynchronous)
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Sending a success message: ";
cout<<"\n("<<myRank<<")Ghost is "<<v<<" Owner is: "<<findOwnerOfGhost(v, verDistance, myRank, numProcs)<<"\n"; fflush(stdout);
#endif
/* MPI_Bsend(&Message[0], 3, MPI_INT, inputSubGraph.findOwner(v),
ComputeTag, comm); */
QLocalVtx.push_back(u);
QGhostVtx.push_back(v);
QMsgType.push_back(SUCCESS);
//ghostOwner = inputSubGraph.findOwner(v);
ghostOwner = findOwnerOfGhost(v, verDistance, myRank, numProcs); assert(ghostOwner != -1); assert(ghostOwner != myRank);
QOwner.push_back(ghostOwner);
PCounter[ghostOwner]++;
NumMessagesBundled++;
msgInd++;
} //End of If( v != Mate[u] )
} //End of Else //A Ghost Vertex
} //End of For Loop adj(u)
} //End of if ( (u >= StartIndex) && (u <= EndIndex) ) //Process Only If a Local Vertex
} //End of while ( /*!Q.empty()*/ !U.empty() )
///////////////////////// END OF PROCESS MATCHED VERTICES /////////////////////////
#ifdef DEBUG_HANG_
if (myRank == 0) cout<<"\n("<<myRank<<") Send Bundles" <<endl; fflush(stdout);
#endif
/////////////////////////////////////////////////////////////////////////////////////////
///////////////////////////// SEND BUNDLED MESSAGES /////////////////////////////////////
/////////////////////////////////////////////////////////////////////////////////////////
//Data structures for Bundled Messages:
vector<MilanLongInt> PCumulative, PMessageBundle, PSizeInfoMessages;
MilanLongInt myIndex=0;
try {
PMessageBundle.reserve(NumMessagesBundled*3); //Three integers per message
PCumulative.reserve(numProcs+1); //Similar to Row Pointer vector in CSR data structure
PSizeInfoMessages.reserve(numProcs*3); //Buffer to hold the Size info message packets
} catch ( length_error ) {
cout<<"Error in function algoDistEdgeApproxDominatingEdgesMessageBundling: \n";
cout<<"Not enough memory to allocate the internal variables \n";
exit(1);
}
PMessageBundle.resize(NumMessagesBundled*3, -1);//Initialize
PCumulative.resize(numProcs+1, 0); //Only initialize the counter variable
PSizeInfoMessages.resize(numProcs*3, 0);
for (MilanInt i=0; i<numProcs; i++) // Changed by Fabio to be an integer, addresses needs to be integers!
PCumulative[i+1]=PCumulative[i]+PCounter[i];
//Reuse PCounter to keep track of how many messages were inserted:
for (MilanInt i=0; i<numProcs; i++) // Changed by Fabio to be an integer, addresses needs to be integers!
PCounter[i]=0;
//Build the Message Bundle packet:
for (MilanInt i=0; i<NumMessagesBundled; i++) { // Changed by Fabio to be an integer, addresses needs to be integers!
myIndex = ( PCumulative[QOwner[i]] + PCounter[QOwner[i]] )*3;
PMessageBundle[myIndex+0] = QLocalVtx[i];
PMessageBundle[myIndex+1] = QGhostVtx[i];
PMessageBundle[myIndex+2] = QMsgType[i];
PCounter[QOwner[i]]++;
}
//Send the Bundled Messages: Use ISend
vector<MPI_Request> SRequest; //Requests that are used for each send message
vector<MPI_Status> SStatus; //Status of sent messages, used in MPI_Wait
MilanLongInt MessageIndex=0; //Pointer for current message
try {
SRequest.reserve(numProcs*2); //At most two messages per processor
SStatus.reserve(numProcs*2);//At most two messages per processor
} catch ( length_error ) {
cout<<"Error in function algoDistEdgeApproxDominatingEdgesLinearSearchImmediateSend: \n";
cout<<"Not enough memory to allocate the internal variables \n";
exit(1);
}
MPI_Request myReq; //A sample request
SRequest.resize(numProcs*2,myReq);
MPI_Status myStat; //A sample status
SStatus.resize(numProcs*2,myStat);
//Send the Messages
for (MilanInt i=0; i<numProcs; i++) { // Changed by Fabio to be an integer, addresses needs to be integers!
if (i==myRank) //Do not send anything to yourself
continue;
//Send the Message with information about the size of next message:
//Build the Message Packet:
PSizeInfoMessages[i*3+0] = (PCumulative[i+1]-PCumulative[i])*3; // # of integers in the next message
PSizeInfoMessages[i*3+1] = -1; //Dummy packet
PSizeInfoMessages[i*3+2] = SIZEINFO; //TYPE
//Send a Request (Asynchronous)
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Sending bundled message to process "<<i<<" size: "<<PSizeInfoMessages[i*3+0]<<endl;
fflush(stdout);
#endif
if ( PSizeInfoMessages[i*3+0] > 0 ) { //Send only if it is a nonempty packet
MPI_Isend(&PSizeInfoMessages[i*3+0], 3, TypeMap<MilanLongInt>(), i, ComputeTag, comm, &SRequest[MessageIndex]);
msgActual++;
MessageIndex++;
//Now Send the message with the data packet:
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Sending Bundle to : "<<i<<endl;
for (k=(PCumulative[i]*3); k< (PCumulative[i]*3+PSizeInfoMessages[i*3+0]); k++)
cout<<PMessageBundle[k]<<",";
cout<<endl;
fflush(stdout);
#endif
MPI_Isend(&PMessageBundle[PCumulative[i]*3], PSizeInfoMessages[i*3+0], TypeMap<MilanLongInt>(), i, BundleTag, comm, &SRequest[MessageIndex]);
MessageIndex++;
} //End of if size > 0
}
//Free up temporary memory:
PCumulative.clear();
QLocalVtx.clear();
QGhostVtx.clear();
QMsgType.clear();
QOwner.clear();
PCounter.clear();
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Number of Ghost edges = "<<numGhostEdges;
cout<<"\n("<<myRank<<")Total number of potential message X 2 = "<<numGhostEdges*2;
cout<<"\n("<<myRank<<")Number messages already sent in bundles = "<<NumMessagesBundled;
if (numGhostEdges>0) {
cout<<"\n("<<myRank<<")Percentage of total = "<<((double)NumMessagesBundled/(double)(numGhostEdges*2))*100.0<<"% \n";
}
fflush(stdout);
#endif
//Allocate memory for MPI Send messages:
/* WILL COME BACK HERE - NO NEED TO STORE ALL THIS MEMORY !! */
MilanInt OneMessageSize=0;
MPI_Pack_size(3, TypeMap<MilanLongInt>(), comm, &OneMessageSize); //Size of one message packet
//How many messages to send?
//Potentially three kinds of messages will be sent/received:
//Request, Success, Failure.
//But only two will be sent from a given processor.
//Substract the number of messages that have already been sent as bundled messages:
MilanLongInt numMessagesToSend = numGhostEdges*2 - NumMessagesBundled;
MilanInt BufferSize = (OneMessageSize+MPI_BSEND_OVERHEAD)*numMessagesToSend;
MilanLongInt *Buffer=0;
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Size of One Message from PACK= "<<OneMessageSize;
cout<<"\n("<<myRank<<")Size of Message overhead = "<<MPI_BSEND_OVERHEAD;
cout<<"\n("<<myRank<<")Number of Ghost edges = "<<numGhostEdges;
cout<<"\n("<<myRank<<")Number of remaining message = "<<numMessagesToSend;
cout<<"\n("<<myRank<<")BufferSize = "<<BufferSize;
cout<<"\n("<<myRank<<")Attaching Buffer on.. ";
fflush(stdout);
#endif
if ( BufferSize > 0 ) {
Buffer = (MilanLongInt *) malloc(BufferSize); //Allocate memory
if ( Buffer == 0 ) {
cout<<"Error in function algoDistEdgeApproxDominatingEdgesLinearSearch: \n";
cout<<"Not enough memory to allocate for send buffer on process "<<myRank<<"\n";
exit(1);
}
MPI_Buffer_attach(Buffer, BufferSize); //Attach the Buffer
}
///////////////////////// END OF SEND BUNDLED MESSAGES //////////////////////////////////
finishTime = MPI_Wtime();
*ph1_time = finishTime-startTime; //Time taken for Phase-1
*ph1_card = myCard ; //Cardinality at the end of Phase-1
startTime = MPI_Wtime();
/////////////////////////////////////////////////////////////////////////////////////////
//////////////////////////////////////// MAIN LOOP //////////////////////////////////////
/////////////////////////////////////////////////////////////////////////////////////////
//Main While Loop:
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<"=========================************==============================="<<endl; fflush(stdout);
fflush(stdout);
#endif
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Entering While(true) loop.."; fflush(stdout);
//U.display(); fflush(stdout);
#endif
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<"=========================************==============================="<<endl; fflush(stdout);
fflush(stdout);
#endif
//Buffer to receive bundled messages
//Maximum messages that can be received from any processor is
//twice the edge cut: REQUEST; REQUEST+(FAILURE/SUCCESS)
vector<MilanLongInt> ReceiveBuffer;
MilanLongInt bundleSize=0, bundleCounter=0;
try {
ReceiveBuffer.reserve(numGhostEdges*2*3); //Three integers per cross edge
} catch ( length_error ) {
cout<<"Error in function algoDistEdgeApproxDominatingEdgesMessageBundling: \n";
cout<<"Not enough memory to allocate the internal variables \n";
exit(1);
}
while ( true ) {
#ifdef DEBUG_HANG_
if (myRank == 0) cout<<"\n("<<myRank<<") Main loop" <<endl; fflush(stdout);
#endif
///////////////////////////////////////////////////////////////////////////////////
/////////////////////////// PROCESS MATCHED VERTICES //////////////////////////////
///////////////////////////////////////////////////////////////////////////////////
while ( /*!Q.empty()*/ !U.empty() ) {
//Q.pop_front();
u = U.pop_front(); //Get an element from the queue
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")u: "<<u; fflush(stdout);
#endif
if ( (u >= StartIndex) && (u <= EndIndex) ) { //Process Only If a Local Vertex
//Get the Adjacency list for u
adj1 = verLocPtr[u-StartIndex]; //Pointer
adj2 = verLocPtr[u-StartIndex+1];
for( k = adj1; k < adj2; k++ ) {
v = verLocInd[k];
if ( (v >= StartIndex) && (v <= EndIndex) ) { //v is a Local Vertex:
if ( Mate[v-StartIndex] >= 0 ) // v is already matched
continue;
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")v: "<<v<<" c(v)= "<<candidateMate[v-StartIndex]<<" Mate[v]: "<<Mate[v];
fflush(stdout);
#endif
if ( candidateMate[v-StartIndex] == u ) { //Only if pointing to the matched vertex
//Start: PARALLEL_PROCESS_EXPOSED_VERTEX_B(v)
//Start: PARALLEL_COMPUTE_CANDIDATE_MATE_B(v)
adj11 = verLocPtr[v-StartIndex];
adj12 = verLocPtr[v-StartIndex+1];
w = -1;
heaviestEdgeWt = MilanFloatMin; //Assign the smallest Value possible first LDBL_MIN
for( k1 = adj11; k1 < adj12; k1++ ) {
if ( (verLocInd[k1]<StartIndex) || (verLocInd[k1]>EndIndex) ) { //Is it a ghost vertex?
if(GMate[Ghost2LocalMap[verLocInd[k1]]] >= 0 )// Already matched
continue;
}
else { //A local vertex
if( Mate[verLocInd[k1]-StartIndex] >= 0 ) // Already matched
continue;
}
if( (edgeLocWeight[k1] > heaviestEdgeWt) ||
((edgeLocWeight[k1] == heaviestEdgeWt)&&(w < verLocInd[k1])) ) {
heaviestEdgeWt = edgeLocWeight[k1];
w = verLocInd[k1];
}
} //End of for loop
candidateMate[v-StartIndex] = w;
//End: PARALLEL_COMPUTE_CANDIDATE_MATE_B(v)
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")"<<v<<" Points to: "<<w; fflush(stdout);
#endif
//If found a dominating edge:
if ( w >= 0 ) {
if ( (w < StartIndex) || (w > EndIndex) ) { //w is a ghost
//Build the Message Packet:
Message[0] = v; //LOCAL
Message[1] = w; //GHOST
Message[2] = REQUEST; //TYPE
//Send a Request (Asynchronous)
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Sending a request message:";
cout<<"\n("<<myRank<<")Ghost is "<<w<<" Owner is: "<<findOwnerOfGhost(w, verDistance, myRank, numProcs);
fflush(stdout);
#endif
ghostOwner = findOwnerOfGhost(w, verDistance, myRank, numProcs); assert(ghostOwner != -1); assert(ghostOwner != myRank);
MPI_Bsend(&Message[0], 3, TypeMap<MilanLongInt>(), ghostOwner, ComputeTag, comm);
msgInd++; msgActual++;
if ( candidateMate[NLVer+Ghost2LocalMap[w]] == v ) {
Mate[v-StartIndex] = w; //v is local
GMate[Ghost2LocalMap[w]] = v; //w is ghost
//Q.push_back(u);
U.push_back(v);
U.push_back(w);
myCard++;
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")MATCH: ("<<v<<","<<w<<") "; fflush(stdout);
#endif
//Decrement the counter:
//Start: PARALLEL_PROCESS_CROSS_EDGE_B(v,w)
if ( Counter[Ghost2LocalMap[w]] > 0 ) {
Counter[Ghost2LocalMap[w]] = Counter[Ghost2LocalMap[w]] - 1; //Decrement
if ( Counter[Ghost2LocalMap[w]] == 0 ) {
S--; //Decrement S
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Decrementing S: Ghost vertex "<<w<<" has received all its messages";
fflush(stdout);
#endif
}
} //End of if Counter[w] > 0
//End: PARALLEL_PROCESS_CROSS_EDGE_B(v,w)
} //End of if CandidateMate[w] = v
} //End of if a Ghost Vertex
else { //w is a local vertex
if ( candidateMate[w-StartIndex] == v ) {
Mate[v-StartIndex] = w; //v is local
Mate[w-StartIndex] = v; //w is local
//Q.push_back(u);
U.push_back(v);
U.push_back(w);
myCard++;
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")MATCH: ("<<v<<","<<w<<") "; fflush(stdout);
#endif
} //End of if(CandidateMate(w) = v
} //End of Else
} //End of if(w >=0)
else { //no dominating edge found: w == -1
adj11 = verLocPtr[v-StartIndex];
adj12 = verLocPtr[v-StartIndex+1];
for( k1 = adj11; k1 < adj12; k1++ ) {
w = verLocInd[k1];
if ( (w < StartIndex) || (w > EndIndex) ) { //A ghost
//Build the Message Packet:
Message[0] = v; //LOCAL
Message[1] = w; //GHOST
Message[2] = FAILURE; //TYPE
//Send a Request (Asynchronous)
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Sending a failure message: ";
cout<<"\n("<<myRank<<")Ghost is "<<w<<" Owner is: "<<findOwnerOfGhost(w, verDistance, myRank, numProcs);
fflush(stdout);
#endif
ghostOwner = findOwnerOfGhost(w, verDistance, myRank, numProcs); assert(ghostOwner != -1); assert(ghostOwner != myRank);
MPI_Bsend(&Message[0], 3, TypeMap<MilanLongInt>(), ghostOwner, ComputeTag, comm);
msgInd++; msgActual++;
} //End of if(GHOST)
} //End of for loop
} // End of Else: w == -1
//End: PARALLEL_PROCESS_EXPOSED_VERTEX_B(v)
} //End of If (candidateMate[v-StartIndex] == u)
} //End of if ( (v >= StartIndex) && (v <= EndIndex) ) //If Local Vertex:
else { //Neighbor v is a ghost vertex
if ( candidateMate[NLVer+Ghost2LocalMap[v]] == u )
candidateMate[NLVer+Ghost2LocalMap[v]] = -1;
if ( v != Mate[u-StartIndex] ) { //u is a local vertex
//Build the Message Packet:
Message[0] = u; //LOCAL
Message[1] = v; //GHOST
Message[2] = SUCCESS; //TYPE
//Send a Request (Asynchronous)
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Sending a success message: ";
cout<<"\n("<<myRank<<")Ghost is "<<v<<" Owner is: "<<findOwnerOfGhost(v, verDistance, myRank, numProcs);
fflush(stdout);
#endif
ghostOwner = findOwnerOfGhost(v, verDistance, myRank, numProcs); assert(ghostOwner != -1); assert(ghostOwner != myRank);
MPI_Bsend(&Message[0], 3, TypeMap<MilanLongInt>(), ghostOwner, ComputeTag, comm);
msgInd++; msgActual++;
#ifdef DEBUG_GHOST_
if ((u<StartIndex) || (u>EndIndex)) {
cout<<"\n("<<myRank<<") "<<__LINE__<<" From Send: should not happen: u= "<<u<<" v= "<<v<<
" StartIndex "<<StartIndex<<" EndIndex "<<EndIndex<<endl;
fflush(stdout);
}
#endif
} //End of If( v != Mate[u] )
} //End of Else //A Ghost Vertex
} //End of For Loop adj(u)
} //End of if ( (u >= StartIndex) && (u <= EndIndex) ) //Process Only If a Local Vertex
} //End of while ( /*!Q.empty()*/ !U.empty() )
///////////////////////// END OF PROCESS MATCHED VERTICES /////////////////////////
//// BREAK IF NO MESSAGES EXPECTED /////////
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Deciding whether to break: S= "<<S<<endl;
#endif
if ( S == 0 ) {
#ifdef DEBUG_HANG_
cout<<"\n("<<myRank<<") Breaking out" <<endl; fflush(stdout);
#endif
break;
}
///////////////////////////////////////////////////////////////////////////////////
/////////////////////////// PROCESS MESSAGES //////////////////////////////////////
///////////////////////////////////////////////////////////////////////////////////
/*
RECEIVE message ( u, v, message_type );
// u is a GHOST vertex ... v is a LOCAL vertex
*/
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<"=========================************==============================="<<endl; fflush(stdout);
fflush(stdout);
#endif
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")About to begin Message processing phase ... S="<<S<<endl;
fflush(stdout);
#endif
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<"=========================************==============================="<<endl; fflush(stdout);
fflush(stdout);
#endif
//BLOCKING RECEIVE:
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<" Waiting for blocking receive..."<<endl; fflush(stdout);
fflush(stdout);
#endif
error_codeC = MPI_Recv(&Message[0], 3, TypeMap<MilanLongInt>(), MPI_ANY_SOURCE, ComputeTag, comm, &computeStatus);
if (error_codeC != MPI_SUCCESS ) {
MPI_Error_string(error_codeC, error_message, &message_length);
cout<<"\n*Error in call to MPI_Receive on Slave: "<<error_message<<"\n"; fflush(stdout);
}
Sender = computeStatus.MPI_SOURCE;
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Received message from Process "<<Sender<<" Type= "<<Message[2]<<endl;
fflush(stdout);
#endif
//If the Message Type is a size indicator, then receive the bigger message.
if ( Message[2] == SIZEINFO ) {
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Received bundled message from Process "<<Sender<<" Size= "<<Message[0]<<endl;
fflush(stdout);
#endif
bundleSize = Message[0]; //#of integers in the message
//Build the Message Buffer:
if (!ReceiveBuffer.empty())
ReceiveBuffer.clear(); //Empty it out first
ReceiveBuffer.resize(bundleSize, -1); //Initialize
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Message Bundle Before: "<<endl;
for (i=0; i<bundleSize; i++)
cout<<ReceiveBuffer[i]<<",";
cout<<endl;
fflush(stdout);
#endif
//Receive the message
error_codeC = MPI_Recv(&ReceiveBuffer[0], bundleSize, TypeMap<MilanLongInt>(), Sender, BundleTag, comm, &computeStatus);
if (error_codeC != MPI_SUCCESS ) {
MPI_Error_string(error_codeC, error_message, &message_length);
cout<<"\n*Error in call to MPI_Receive on processor "<<myRank<<" Error: "<<error_message<<"\n"; fflush(stdout);
}
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Message Bundle After: "<<endl;
for (i=0; i<bundleSize; i++)
cout<<ReceiveBuffer[i]<<",";
cout<<endl;
fflush(stdout);
#endif
}
else { //Just a single message:
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Received regular message from Process "<<Sender<<" u= "<<Message[0]<<" v= "<<Message[1]<<endl;
fflush(stdout);
#endif
//Add the current message to Queue:
bundleSize = 3; //#of integers in the message
//Build the Message Buffer:
if (!ReceiveBuffer.empty())
ReceiveBuffer.clear(); //Empty it out first
ReceiveBuffer.resize(bundleSize, -1); //Initialize
ReceiveBuffer[0]=Message[0]; //u
ReceiveBuffer[1]=Message[1]; //v
ReceiveBuffer[2]=Message[2]; //message_type
}
bundleCounter = 0;
while ( bundleCounter < bundleSize ) {
u = ReceiveBuffer[bundleCounter]; //GHOST
bundleCounter++;
v = ReceiveBuffer[bundleCounter]; //LOCAL
bundleCounter++;
message_type = ReceiveBuffer[bundleCounter]; //TYPE
bundleCounter++;
#ifdef DEBUG_GHOST_
if ((v<StartIndex) || (v>EndIndex)) {
cout<<"\n("<<myRank<<") From ReceiveBuffer: This should not happen: u= "<<u<<" v= "<<v<<" Type= "<<message_type<<
" StartIndex "<<StartIndex<<" EndIndex "<<EndIndex<<endl;
fflush(stdout);
}
#endif
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Processing message: u= "<<u<<" v= "<<v<<" Type= "<<message_type<<endl;
fflush(stdout);
#endif
// CASE I: REQUEST
if ( message_type == REQUEST ) {
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Message type is REQUEST"<<endl; fflush(stdout);
#endif
#ifdef DEBUG_GHOST_
if ((v<0)||(v<StartIndex) || ((v-StartIndex)>NLVer)) {
cout<<"\n("<<myRank<<") case 1 Bad address "<<v<<" "<<StartIndex<<" "<<v-StartIndex<<" "<<NLVer<<endl; fflush(stdout);
}
#endif
if ( Mate[v-StartIndex] == -1 ) { //Process only if not already matched (v is local)
candidateMate[NLVer+Ghost2LocalMap[u]] = v; //Set CandidateMate for the ghost
if ( candidateMate[v-StartIndex] == u ) {
GMate[Ghost2LocalMap[u]] = v; //u is ghost
Mate[v-StartIndex] = u; //v is local
//Q.push_back(u);
U.push_back(v);
U.push_back(u);
myCard++;
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")MATCH: ("<<v<<","<<u<<") "<<endl; fflush(stdout);
#endif
//Start: PARALLEL_PROCESS_CROSS_EDGE_B(v,u)
if ( Counter[Ghost2LocalMap[u]] > 0 ) {
Counter[Ghost2LocalMap[u]] = Counter[Ghost2LocalMap[u]] - 1; //Decrement
if ( Counter[Ghost2LocalMap[u]] == 0 ) {
S--; //Decrement S
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Decrementing S: Ghost vertex "<<u<<" has received all its messages"<<endl;
fflush(stdout);
#endif
}
} //End of if Counter[w] > 0
//End: PARALLEL_PROCESS_CROSS_EDGE_B(v,u)
} //End of if ( candidateMate[v-StartIndex] == u )e
} //End of if ( Mate[v] == -1 )
} //End of REQUEST
else { //CASE II: SUCCESS
if ( message_type == SUCCESS ) {
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Message type is SUCCESS"<<endl; fflush(stdout);
#endif
//Start: PARALLEL_PROCESS_CROSS_EDGE_B(v,u)
GMate[Ghost2LocalMap[u]] = EndIndex+1; //Set a Dummy Mate to make sure that we do not (u is a ghost)
//process it again
if ( Counter[Ghost2LocalMap[u]] > 0 ) {
Counter[Ghost2LocalMap[u]] = Counter[Ghost2LocalMap[u]] - 1; //Decrement
if ( Counter[Ghost2LocalMap[u]] == 0 ) {
S--; //Decrement S
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Decrementing S: Ghost vertex "<<u<<" has received all its messages";
fflush(stdout);
#endif
}
} //End of if Counter[w] > 0
//End: PARALLEL_PROCESS_CROSS_EDGE_B(v,u)
#ifdef DEBUG_GHOST_
if ((v<0)||(v<StartIndex) || ((v-StartIndex)>NLVer)) {
cout<<"\n("<<myRank<<") case 2 Bad address "<<v<<" "<<StartIndex<<" "<<v-StartIndex<<" "<<NLVer<<endl; fflush(stdout);
}
#endif
if ( Mate[v-StartIndex] == -1 ) { //Process only if not already matched ( v is local)
if ( candidateMate[v-StartIndex] == u ) {
//Start: PARALLEL_PROCESS_EXPOSED_VERTEX_B(v)
//Start: PARALLEL_COMPUTE_CANDIDATE_MATE_B(v)
adj11 = verLocPtr[v-StartIndex];
adj12 = verLocPtr[v-StartIndex+1];
w = -1;
heaviestEdgeWt = MilanFloatMin; //Assign the smallest Value possible first LDBL_MIN
for( k1 = adj11; k1 < adj12; k1++ ) {
if ( (verLocInd[k1]<StartIndex) || (verLocInd[k1]>EndIndex) ) { //Is it a ghost vertex?
if(GMate[Ghost2LocalMap[verLocInd[k1]]] >= 0 )// Already matched
continue;
}
else { //A local vertex
if( Mate[verLocInd[k1]-StartIndex] >= 0 ) // Already matched
continue;
}
if( (edgeLocWeight[k1] > heaviestEdgeWt) ||
((edgeLocWeight[k1] == heaviestEdgeWt)&&(w < verLocInd[k1])) ) {
heaviestEdgeWt = edgeLocWeight[k1];
w = verLocInd[k1];
}
} //End of for loop
candidateMate[v-StartIndex] = w;
//End: PARALLEL_COMPUTE_CANDIDATE_MATE_B(v)
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")"<<v<<" Points to: "<<w<<endl; fflush(stdout);
#endif
//If found a dominating edge:
if ( w >= 0 ) {
if ( (w < StartIndex) || (w > EndIndex) ) { //w is a ghost
//Build the Message Packet:
Message[0] = v; //LOCAL
Message[1] = w; //GHOST
Message[2] = REQUEST; //TYPE
//Send a Request (Asynchronous)
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Sending a request message: ";
cout<<"\n("<<myRank<<")Ghost is "<<w<<" Owner is: "<<findOwnerOfGhost(w, verDistance, myRank, numProcs)<<endl;
fflush(stdout);
#endif
ghostOwner = findOwnerOfGhost(w, verDistance, myRank, numProcs); assert(ghostOwner != -1); assert(ghostOwner != myRank);
MPI_Bsend(&Message[0], 3, TypeMap<MilanLongInt>(), ghostOwner, ComputeTag, comm);
msgInd++; msgActual++;
if ( candidateMate[NLVer+Ghost2LocalMap[w]] == v ) {
Mate[v-StartIndex] = w; //v is local
GMate[Ghost2LocalMap[w]] = v; //w is ghost
//Q.push_back(u);
U.push_back(v);
U.push_back(w);
myCard++;
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")MATCH: ("<<v<<","<<w<<") "<<endl; fflush(stdout);
#endif
//Decrement the counter:
//Start: PARALLEL_PROCESS_CROSS_EDGE_B(v,w)
if ( Counter[Ghost2LocalMap[w]] > 0 ) {
Counter[Ghost2LocalMap[w]] = Counter[Ghost2LocalMap[w]] - 1; //Decrement
if ( Counter[Ghost2LocalMap[w]] == 0 ) {
S--; //Decrement S
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Decrementing S: Ghost vertex "<<w<<" has received all its messages";
fflush(stdout);
#endif
}
} //End of if Counter[w] > 0
//End: PARALLEL_PROCESS_CROSS_EDGE_B(v,w)
} //End of if CandidateMate[w] = v
} //End of if a Ghost Vertex
else { //w is a local vertex
if ( candidateMate[w-StartIndex] == v ) {
Mate[v-StartIndex] = w; //v is local
Mate[w-StartIndex] = v; //w is local
//Q.push_back(u);
U.push_back(v);
U.push_back(w);
myCard++;
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")MATCH: ("<<v<<","<<w<<") "<<endl; fflush(stdout);
#endif
} //End of if(CandidateMate(w) = v
} //End of Else
} //End of if(w >=0)
else { //No dominant edge found
adj11 = verLocPtr[v-StartIndex];
adj12 = verLocPtr[v-StartIndex+1];
for( k1 = adj11; k1 < adj12; k1++ ) {
w = verLocInd[k1];
if ( (w < StartIndex) || (w > EndIndex) ) { //A ghost
//Build the Message Packet:
Message[0] = v; //LOCAL
Message[1] = w; //GHOST
Message[2] = FAILURE; //TYPE
//Send a Request (Asynchronous)
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Sending a failure message: ";
cout<<"\n("<<myRank<<")Ghost is "<<w<<" Owner is: "<<findOwnerOfGhost(w, verDistance, myRank, numProcs)<<endl;
fflush(stdout);
#endif
//MPI_Bsend(&Message[0], 3, MilanMpiLongInt, findOwnerOfGhost(w, verDistance, myRank, numProcs),
ghostOwner = findOwnerOfGhost(w, verDistance, myRank, numProcs); assert(ghostOwner != -1); assert(ghostOwner != myRank);
MPI_Bsend(&Message[0], 3, TypeMap<MilanLongInt>(), ghostOwner, ComputeTag, comm);
msgInd++; msgActual++;
} //End of if(GHOST)
} //End of for loop
} // End of Else: w == -1
//End: PARALLEL_PROCESS_EXPOSED_VERTEX_B(v)
} //End of if ( candidateMate[v-StartIndex] == u )
} //End of if ( Mate[v] == -1 )
} //End of if ( message_type == SUCCESS )
else { //CASE III: FAILURE
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Message type is FAILURE"<<endl; fflush(stdout);
#endif
//Start: PARALLEL_PROCESS_CROSS_EDGE_B(v,u)
GMate[Ghost2LocalMap[u]] = EndIndex+1; //Set a Dummy Mate to make sure that we do not (u is a ghost)
//process it again
if ( Counter[Ghost2LocalMap[u]] > 0 ) {
Counter[Ghost2LocalMap[u]] = Counter[Ghost2LocalMap[u]] - 1; //Decrement
if ( Counter[Ghost2LocalMap[u]] == 0 ) {
S--; //Decrement S
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Decrementing S: Ghost vertex "<<u<<" has received all its messages";
fflush(stdout);
#endif
}
} //End of if Counter[w] > 0
//End: PARALLEL_PROCESS_CROSS_EDGE_B(v,u)
} //End of else: CASE III
} //End of else: CASE I
} //End of if (!MsgQ.empty())
///////////////////////// END OF PROCESS MESSAGES /////////////////////////////////
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")Finished Message processing phase: S= "<<S; fflush(stdout);
cout<<"\n("<<myRank<<")** SENT : ACTUAL= "<<msgActual; fflush(stdout);
cout<<"\n("<<myRank<<")** SENT : INDIVIDUAL= "<<msgInd<<endl; fflush(stdout);
#endif
} //End of while (true)
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<") Waitall= "<<endl; fflush(stdout);
#endif
#ifdef DEBUG_HANG_
cout<<"\n("<<myRank<<") Waitall " <<endl; fflush(stdout);
#endif
//MPI_Barrier(comm);
//Cleanup Phase
MPI_Waitall(MessageIndex, &SRequest[0], &SStatus[0]);
//MPI_Buffer_attach(&Buffer, BufferSize); //Attach the Buffer
if ( BufferSize > 0 ) {
MPI_Buffer_detach(&Buffer, &BufferSize); //Detach the Buffer
free(Buffer); //Free the memory that was allocated
}
finishTime = MPI_Wtime();
*ph2_time = finishTime-startTime; //Time taken for Phase-2
*ph2_card = myCard ; //Cardinality at the end of Phase-2
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<")End of function to compute matching: "<<endl; fflush(stdout);
cout<<"\n("<<myRank<<")myCardinality: "<<myCard<<endl; fflush(stdout);
cout<<"\n("<<myRank<<")Matching took "<<finishTime-startTime<<"seconds"<<endl; fflush(stdout);
cout<<"\n("<<myRank<<")** Getting out of the matching function **"<<endl; fflush(stdout);
#endif
#ifdef PRINT_DEBUG_INFO_
cout<<"\n("<<myRank<<") Number of Ghost edges = "<<numGhostEdges;
cout<<"\n("<<myRank<<") Total number of potential message X 2 = "<<numGhostEdges*2;
cout<<"\n("<<myRank<<") Number messages bundled = "<<NumMessagesBundled;
cout<<"\n("<<myRank<<") Total Individual Messages sent = "<< msgInd;
if (msgInd>0) {
cout<<"\n("<<myRank<<") Percentage of messages bundled = "<<((double)NumMessagesBundled/(double)(msgInd))*100.0<<"% \n";
}
fflush(stdout);
#endif
*msgActualSent = msgActual;
*msgIndSent = msgInd;
if (msgInd > 0) {
*msgPercent = ((double)NumMessagesBundled/(double)(msgInd))*100.0;
} else {
*msgPercent = 0;
}
#ifdef DEBUG_HANG_
if (myRank == 0) cout<<"\n("<<myRank<<") Done" <<endl; fflush(stdout);
#endif
//MPI_Barrier(comm);
#endif
} //End of algoDistEdgeApproxDomEdgesLinearSearchMesgBndlSmallMate
#endif
///Find the owner of a ghost node:
inline MilanInt findOwnerOfGhost(MilanLongInt vtxIndex, MilanLongInt *mVerDistance,
MilanInt myRank, MilanInt numProcs) {
//MilanLongInt Size = mVerDistance.size();
MilanLongInt mStartInd = mVerDistance[myRank];
MilanInt Start = 0;
MilanInt End = numProcs;
MilanInt Current = 0;
#if 0
if ( vtxIndex < mStartInd )
End = myRank;
else
Start = myRank;
#endif
while ( Start <= End ) {
Current = (End + Start)/2;
//CASE-1:
if ( mVerDistance[Current] == vtxIndex ) {
while ( mVerDistance[Current+1] == vtxIndex ) {
Current++;
if ( Current == numProcs )
return (-1);
}
return (Current);
}
else { //CASE 2:
if ( mVerDistance[Current] > vtxIndex )
End = Current - 1;
else //CASE 3:
Start = Current + 1;
}
} //End of While()
if ( Current == 0 )
return (Current);
else {
if ( mVerDistance[Current] > vtxIndex )
return (Current-1);
else
return (Current);
} //End of else
return (-1); //It should not reach here!
} //End of findOwnerOfGhost()
#endif
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