[UPDATE] Changed all the interfaces that calls psi_swapdata inside PSBLAS internals for double precision vectors. Added also tests under test/comm/ in order to check psi_swapdata, psb_spmv and psb_cg calls
Stack-1
3 months ago
parent
09a5a74d75
commit
33477e4f03
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Communication scheme tests
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==========================
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This directory contains tests created after adding multiple communication schemes
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to PSBLAS.
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The goal is to exercise and compare communication patterns at different layers:
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- direct halo exchange (`psi_swapdata`)
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- overlap exchange for transpose/SpMV workflows (`psi_swaptran` + `psi_swapdata`)
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- full Krylov solver runs (`CG`) using different comm schemes.
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Communication schemes covered in this area:
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- `psb_comm_isend_irecv_` (baseline point-to-point)
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- `psb_comm_ineighbor_alltoallv_` (neighbor collective)
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- `psb_comm_persistent_ineighbor_alltoallv_` (persistent neighbor collective)
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See:
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- `swapdata/` for a direct halo-exchange test.
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- `spmv/` for an overlap SpMV test that uses different communication schemes.
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- `cg/` for a conjugate-gradient solve-time comparison across the three schemes.
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INSTALLDIR=../../..
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INCDIR=$(INSTALLDIR)/include/
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MODDIR=$(INSTALLDIR)/modules/
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include $(INCDIR)/Make.inc.psblas
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LIBDIR=$(INSTALLDIR)/lib/
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PSBLAS_LIB= -L$(LIBDIR) -lpsb_util -lpsb_linsolve -lpsb_prec -lpsb_base
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LDLIBS=$(PSBLDLIBS)
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FINCLUDES=$(FMFLAG)$(MODDIR) $(FMFLAG).
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NP ?= 4
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IDIM ?= 40
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PROGSRC=psb_comm_cg_test.F90
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TOBJS=psb_comm_cg_test.o
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EXEDIR=./runs
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EXE=psb_comm_cg_test
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all: runsd $(EXE)
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runsd:
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(if test ! -d runs ; then mkdir runs; fi)
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psb_comm_cg_test.o: $(PROGSRC)
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$(FC) $(FCOPT) $(FINCLUDES) $(FDEFINES) -c $(PROGSRC) -o $@
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$(EXE): $(TOBJS)
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$(FLINK) $(LOPT) $(TOBJS) -o $(EXE) $(PSBLAS_LIB) $(LDLIBS)
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/bin/mv $(EXE) $(EXEDIR)
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run: all
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mpirun -np $(NP) $(EXEDIR)/$(EXE) $(IDIM)
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clean:
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/bin/rm -f $(TOBJS) *$(.mod) $(EXEDIR)/$(EXE)
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CG no-preconditioner communication test
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=======================================
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This test lives under `test/comm/cg` and builds a local executable:
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- source: `psb_comm_cg_test.F90`
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- executable: `runs/psb_comm_cg_test`
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Behavior:
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- generates a 3D PDE matrix using local `psb_d_gen_pde3d` (double precision)
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- solves with `CG`
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- uses preconditioner `NONE`
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- runs CG three times, changing communication scheme of `x` each run
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Communication pattern used in this test:
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1. reset solution vector
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2. set communication scheme on `x%v%comm_handle`
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3. run full `psb_krylov('CG', ...)`
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4. collect and compare solve time
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Schemes compared:
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- `psb_comm_isend_irecv_`
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- `psb_comm_ineighbor_alltoallv_`
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- `psb_comm_persistent_ineighbor_alltoallv_`
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How to run
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----------
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From this directory:
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- `make run` (defaults: `NP=4`, `IDIM=40`)
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- `make run NP=8 IDIM=80`
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The program accepts one optional CLI argument: `IDIM`.
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program psb_comm_cg_test
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use psb_base_mod
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use psb_prec_mod
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use psb_linsolve_mod
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use psb_comm_factory_mod
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implicit none
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type(psb_ctxt_type) :: ctxt
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type(psb_dspmat_type) :: a
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type(psb_desc_type) :: desc_a
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type(psb_d_vect_type) :: b, x
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type(psb_dprec_type) :: prec
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integer(psb_ipk_) :: info, iam, np
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integer(psb_ipk_) :: idim, itmax, itrace, istop, iter, is
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integer(psb_ipk_) :: iter_arr(3), info_arr(3)
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integer(psb_ipk_) :: scheme_types(3)
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real(psb_dpk_) :: eps, err, t1, t2
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real(psb_dpk_) :: tsolve(3), err_arr(3)
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character(len=25) :: scheme_names(3)
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character(len=5) :: afmt
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character(len=256) :: arg
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info = psb_success_
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afmt = 'CSR'
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idim = 40
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itmax = 500
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itrace = 0
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istop = 2
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eps = 1.d-6
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scheme_types = (/ psb_comm_isend_irecv_, psb_comm_ineighbor_alltoallv_, &
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& psb_comm_persistent_ineighbor_alltoallv_ /)
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scheme_names(1) = 'isend_irecv'
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scheme_names(2) = 'ineighbor_alltoallv'
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scheme_names(3) = 'persistent_ineighbor_a2av'
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call get_command_argument(1,arg)
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if (len_trim(arg) > 0) then
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read(arg,*,iostat=info) idim
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if (info /= 0) then
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idim = 40
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info = psb_success_
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end if
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end if
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call psb_init(ctxt)
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call psb_info(ctxt, iam, np)
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if (iam == psb_root_) then
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write(psb_out_unit,*) 'Welcome to PSBLAS version: ', psb_version_string_
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write(psb_out_unit,*) 'This is the comm/cg test program'
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write(psb_out_unit,'("Grid dimensions : ",i4," x ",i4," x ",i4)') idim,idim,idim
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write(psb_out_unit,'("Number of processors : ",i0)') np
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write(psb_out_unit,'("Iterative method : CG")')
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write(psb_out_unit,'("Preconditioner : NONE")')
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write(psb_out_unit,'(" ")')
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end if
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call psb_barrier(ctxt)
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t1 = psb_wtime()
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call psb_d_gen_pde3d(ctxt,idim,a,b,x,desc_a,afmt,info)
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if (info /= psb_success_) goto 9999
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call prec%init(ctxt,'NONE',info)
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if (info /= psb_success_) goto 9999
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call prec%build(a,desc_a,info)
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if (info /= psb_success_) goto 9999
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do is = 1, 3
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call psb_geaxpby(dzero,b,dzero,x,desc_a,info)
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if (info /= psb_success_) goto 9999
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call psb_comm_init(scheme_types(is),x%v%comm_handle,info)
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if (info /= psb_success_) goto 9999
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call psb_barrier(ctxt)
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t1 = psb_wtime()
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call psb_krylov('CG',a,prec,b,x,eps,desc_a,info,&
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& itmax=itmax,iter=iter,err=err,itrace=itrace,istop=istop)
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t2 = psb_wtime() - t1
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call psb_amx(ctxt,t2)
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tsolve(is) = t2
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iter_arr(is) = iter
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err_arr(is) = err
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info_arr(is) = info
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if (info /= psb_success_) goto 9999
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end do
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if (iam == psb_root_) then
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write(psb_out_unit,'(" ")')
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write(psb_out_unit,'("CG solve time by communication scheme")')
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write(psb_out_unit,'("--------------------------------------")')
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do is = 1, 3
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write(psb_out_unit,'(a25,2x,"time=",es12.5,2x,"iter=",i8,2x,"err=",es12.5,2x,"info=",i6)') &
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& trim(scheme_names(is)), tsolve(is), iter_arr(is), err_arr(is), info_arr(is)
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end do
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end if
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call psb_gefree(b,desc_a,info)
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call psb_gefree(x,desc_a,info)
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call psb_spfree(a,desc_a,info)
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call prec%free(info)
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call psb_cdfree(desc_a,info)
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call psb_exit(ctxt)
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stop
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9999 call psb_error(ctxt)
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stop 1
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contains
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function b1(x,y,z) result(val)
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real(psb_dpk_), intent(in) :: x,y,z
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real(psb_dpk_) :: val
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val = dzero
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end function b1
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function b2(x,y,z) result(val)
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real(psb_dpk_), intent(in) :: x,y,z
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real(psb_dpk_) :: val
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val = dzero
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end function b2
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function b3(x,y,z) result(val)
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real(psb_dpk_), intent(in) :: x,y,z
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real(psb_dpk_) :: val
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val = dzero
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end function b3
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function cfun(x,y,z) result(val)
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real(psb_dpk_), intent(in) :: x,y,z
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real(psb_dpk_) :: val
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val = dzero
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end function cfun
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function a1(x,y,z) result(val)
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real(psb_dpk_), intent(in) :: x,y,z
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real(psb_dpk_) :: val
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val = done/80
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end function a1
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function a2(x,y,z) result(val)
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real(psb_dpk_), intent(in) :: x,y,z
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real(psb_dpk_) :: val
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val = done/80
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end function a2
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function a3(x,y,z) result(val)
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real(psb_dpk_), intent(in) :: x,y,z
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real(psb_dpk_) :: val
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val = done/80
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end function a3
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function gfun(x,y,z) result(val)
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real(psb_dpk_), intent(in) :: x,y,z
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real(psb_dpk_) :: val
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val = dzero
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if (x == done) then
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val = done
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else if (x == dzero) then
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val = exp(y**2-z**2)
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end if
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end function gfun
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subroutine psb_d_gen_pde3d(ctxt,idim,a,bv,xv,desc_a,afmt,info)
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implicit none
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integer(psb_ipk_), intent(in) :: idim
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type(psb_dspmat_type), intent(out) :: a
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type(psb_d_vect_type), intent(out) :: xv,bv
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type(psb_desc_type), intent(out) :: desc_a
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type(psb_ctxt_type), intent(in) :: ctxt
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integer(psb_ipk_), intent(out) :: info
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character(len=*), intent(in) :: afmt
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integer(psb_ipk_), parameter :: nb=20
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real(psb_dpk_) :: zt(nb),x,y,z
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integer(psb_lpk_) :: m,n,glob_row
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integer(psb_ipk_) :: nnz,nlr,i,ii,ib,k
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integer(psb_ipk_) :: ix,iy,iz
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integer(psb_ipk_) :: np, iam, nr, nt
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integer(psb_ipk_) :: icoeff
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integer(psb_lpk_), allocatable :: irow(:),icol(:),myidx(:)
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real(psb_dpk_), allocatable :: val(:)
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real(psb_dpk_) :: deltah, sqdeltah, deltah2
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real(psb_dpk_) :: t0, t1, t2, t3, tasb, talc, ttot, tgen, tcdasb
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integer(psb_ipk_) :: err_act
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character(len=20) :: name, ch_err, tmpfmt
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info = psb_success_
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name = 'create_matrix'
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call psb_erractionsave(err_act)
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call psb_info(ctxt, iam, np)
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deltah = done/(idim+2)
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sqdeltah = deltah*deltah
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deltah2 = 2.d0*deltah
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m = idim*idim*idim
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n = m
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nnz = ((n*9)/(np))
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if(iam == psb_root_) write(psb_out_unit,'("Generating Matrix (size=",i0,")...")')n
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nt = (m+np-1)/np
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nr = max(0,min(nt,m-(iam*nt)))
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nt = nr
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call psb_sum(ctxt,nt)
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if (nt /= m) then
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write(psb_err_unit,*) iam, 'Initialization error ',nr,nt,m
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info = -1
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call psb_barrier(ctxt)
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call psb_abort(ctxt)
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return
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end if
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call psb_barrier(ctxt)
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t0 = psb_wtime()
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call psb_cdall(ctxt,desc_a,info,nl=nr)
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if (info == psb_success_) call psb_spall(a,desc_a,info,nnz=nnz)
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if (info == psb_success_) call psb_geall(xv,desc_a,info)
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if (info == psb_success_) call psb_geall(bv,desc_a,info)
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call psb_barrier(ctxt)
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talc = psb_wtime()-t0
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if (info /= psb_success_) then
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info=psb_err_from_subroutine_
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ch_err='allocation rout.'
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call psb_errpush(info,name,a_err=ch_err)
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goto 9999
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end if
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allocate(val(20*nb),irow(20*nb),icol(20*nb),stat=info)
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if (info /= psb_success_) then
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info=psb_err_alloc_dealloc_
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call psb_errpush(info,name)
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goto 9999
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endif
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myidx = desc_a%get_global_indices()
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nlr = size(myidx)
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call psb_barrier(ctxt)
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t1 = psb_wtime()
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do ii=1, nlr,nb
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ib = min(nb,nlr-ii+1)
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icoeff = 1
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do k=1,ib
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i=ii+k-1
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glob_row=myidx(i)
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if (mod(glob_row,(idim*idim)) == 0) then
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ix = glob_row/(idim*idim)
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else
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ix = glob_row/(idim*idim)+1
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endif
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if (mod((glob_row-(ix-1)*idim*idim),idim) == 0) then
|
||||||
|
iy = (glob_row-(ix-1)*idim*idim)/idim
|
||||||
|
else
|
||||||
|
iy = (glob_row-(ix-1)*idim*idim)/idim+1
|
||||||
|
endif
|
||||||
|
iz = glob_row-(ix-1)*idim*idim-(iy-1)*idim
|
||||||
|
|
||||||
|
x = (ix-1)*deltah
|
||||||
|
y = (iy-1)*deltah
|
||||||
|
z = (iz-1)*deltah
|
||||||
|
zt(k) = dzero
|
||||||
|
|
||||||
|
val(icoeff) = -a1(x,y,z)/sqdeltah-b1(x,y,z)/deltah2
|
||||||
|
if (ix == 1) then
|
||||||
|
zt(k) = gfun(dzero,y,z)*(-val(icoeff)) + zt(k)
|
||||||
|
else
|
||||||
|
icol(icoeff) = (ix-2)*idim*idim+(iy-1)*idim+iz
|
||||||
|
irow(icoeff) = glob_row
|
||||||
|
icoeff = icoeff+1
|
||||||
|
endif
|
||||||
|
|
||||||
|
val(icoeff) = -a2(x,y,z)/sqdeltah-b2(x,y,z)/deltah2
|
||||||
|
if (iy == 1) then
|
||||||
|
zt(k) = gfun(x,dzero,z)*(-val(icoeff)) + zt(k)
|
||||||
|
else
|
||||||
|
icol(icoeff) = (ix-1)*idim*idim+(iy-2)*idim+iz
|
||||||
|
irow(icoeff) = glob_row
|
||||||
|
icoeff = icoeff+1
|
||||||
|
endif
|
||||||
|
|
||||||
|
val(icoeff) = -a3(x,y,z)/sqdeltah-b3(x,y,z)/deltah2
|
||||||
|
if (iz == 1) then
|
||||||
|
zt(k) = gfun(x,y,dzero)*(-val(icoeff)) + zt(k)
|
||||||
|
else
|
||||||
|
icol(icoeff) = (ix-1)*idim*idim+(iy-1)*idim+(iz-1)
|
||||||
|
irow(icoeff) = glob_row
|
||||||
|
icoeff = icoeff+1
|
||||||
|
endif
|
||||||
|
|
||||||
|
val(icoeff)=2.d0*(a1(x,y,z)+a2(x,y,z)+a3(x,y,z))/sqdeltah + cfun(x,y,z)
|
||||||
|
icol(icoeff) = (ix-1)*idim*idim+(iy-1)*idim+iz
|
||||||
|
irow(icoeff) = glob_row
|
||||||
|
icoeff = icoeff+1
|
||||||
|
|
||||||
|
val(icoeff) = -a3(x,y,z)/sqdeltah+b3(x,y,z)/deltah2
|
||||||
|
if (iz == idim) then
|
||||||
|
zt(k) = gfun(x,y,done)*(-val(icoeff)) + zt(k)
|
||||||
|
else
|
||||||
|
icol(icoeff) = (ix-1)*idim*idim+(iy-1)*idim+(iz+1)
|
||||||
|
irow(icoeff) = glob_row
|
||||||
|
icoeff = icoeff+1
|
||||||
|
endif
|
||||||
|
|
||||||
|
val(icoeff) = -a2(x,y,z)/sqdeltah+b2(x,y,z)/deltah2
|
||||||
|
if (iy == idim) then
|
||||||
|
zt(k) = gfun(x,done,z)*(-val(icoeff)) + zt(k)
|
||||||
|
else
|
||||||
|
icol(icoeff) = (ix-1)*idim*idim+iy*idim+iz
|
||||||
|
irow(icoeff) = glob_row
|
||||||
|
icoeff = icoeff+1
|
||||||
|
endif
|
||||||
|
|
||||||
|
val(icoeff) = -a1(x,y,z)/sqdeltah+b1(x,y,z)/deltah2
|
||||||
|
if (ix == idim) then
|
||||||
|
zt(k) = gfun(done,y,z)*(-val(icoeff)) + zt(k)
|
||||||
|
else
|
||||||
|
icol(icoeff) = ix*idim*idim+(iy-1)*idim+iz
|
||||||
|
irow(icoeff) = glob_row
|
||||||
|
icoeff = icoeff+1
|
||||||
|
endif
|
||||||
|
end do
|
||||||
|
|
||||||
|
call psb_spins(icoeff-1,irow,icol,val,a,desc_a,info)
|
||||||
|
if(info /= psb_success_) exit
|
||||||
|
call psb_geins(ib,myidx(ii:ii+ib-1),zt(1:ib),bv,desc_a,info)
|
||||||
|
if(info /= psb_success_) exit
|
||||||
|
zt(:)=dzero
|
||||||
|
call psb_geins(ib,myidx(ii:ii+ib-1),zt(1:ib),xv,desc_a,info)
|
||||||
|
if(info /= psb_success_) exit
|
||||||
|
end do
|
||||||
|
|
||||||
|
tgen = psb_wtime()-t1
|
||||||
|
if(info /= psb_success_) then
|
||||||
|
info=psb_err_from_subroutine_
|
||||||
|
ch_err='insert rout.'
|
||||||
|
call psb_errpush(info,name,a_err=ch_err)
|
||||||
|
goto 9999
|
||||||
|
end if
|
||||||
|
|
||||||
|
deallocate(val,irow,icol)
|
||||||
|
|
||||||
|
call psb_barrier(ctxt)
|
||||||
|
t1 = psb_wtime()
|
||||||
|
call psb_cdasb(desc_a,info)
|
||||||
|
tcdasb = psb_wtime()-t1
|
||||||
|
|
||||||
|
call psb_barrier(ctxt)
|
||||||
|
t1 = psb_wtime()
|
||||||
|
if (info == psb_success_) call psb_spasb(a,desc_a,info,afmt=afmt)
|
||||||
|
call psb_barrier(ctxt)
|
||||||
|
if(info /= psb_success_) then
|
||||||
|
info=psb_err_from_subroutine_
|
||||||
|
ch_err='asb rout.'
|
||||||
|
call psb_errpush(info,name,a_err=ch_err)
|
||||||
|
goto 9999
|
||||||
|
end if
|
||||||
|
if (info == psb_success_) call psb_geasb(xv,desc_a,info)
|
||||||
|
if (info == psb_success_) call psb_geasb(bv,desc_a,info)
|
||||||
|
if(info /= psb_success_) then
|
||||||
|
info=psb_err_from_subroutine_
|
||||||
|
ch_err='asb rout.'
|
||||||
|
call psb_errpush(info,name,a_err=ch_err)
|
||||||
|
goto 9999
|
||||||
|
end if
|
||||||
|
|
||||||
|
tasb = psb_wtime()-t1
|
||||||
|
call psb_barrier(ctxt)
|
||||||
|
ttot = psb_wtime() - t0
|
||||||
|
|
||||||
|
call psb_amx(ctxt,talc)
|
||||||
|
call psb_amx(ctxt,tgen)
|
||||||
|
call psb_amx(ctxt,tasb)
|
||||||
|
call psb_amx(ctxt,ttot)
|
||||||
|
if(iam == psb_root_) then
|
||||||
|
tmpfmt = a%get_fmt()
|
||||||
|
write(psb_out_unit,'("The matrix has been generated and assembled in ",a3," format.")') tmpfmt
|
||||||
|
write(psb_out_unit,'("-allocation time : ",es12.5)') talc
|
||||||
|
write(psb_out_unit,'("-coeff. gen. time : ",es12.5)') tgen
|
||||||
|
write(psb_out_unit,'("-desc asbly time : ",es12.5)') tcdasb
|
||||||
|
write(psb_out_unit,'("- mat asbly time : ",es12.5)') tasb
|
||||||
|
write(psb_out_unit,'("-total time : ",es12.5)') ttot
|
||||||
|
end if
|
||||||
|
|
||||||
|
call psb_erractionrestore(err_act)
|
||||||
|
return
|
||||||
|
|
||||||
|
9999 call psb_error_handler(ctxt,err_act)
|
||||||
|
return
|
||||||
|
end subroutine psb_d_gen_pde3d
|
||||||
|
|
||||||
|
end program psb_comm_cg_test
|
||||||
@ -0,0 +1,18 @@
|
|||||||
|
17 Number of entries below this
|
||||||
|
CG Iterative method BICGSTAB CGS BICG BICGSTABL RGMRES FCG CGR RICHARDSON
|
||||||
|
NONE Preconditioner NONE DIAG BJAC
|
||||||
|
CSR Storage format for matrix A: CSR COO
|
||||||
|
100 Domain size (actual system is this**3 in pde3d)
|
||||||
|
3 Partition: 1 BLOCK 3 3D
|
||||||
|
2 Stopping criterion 1 2
|
||||||
|
0200 MAXIT
|
||||||
|
10 ITRACE
|
||||||
|
002 IRST restart for RGMRES and BiCGSTABL
|
||||||
|
INVK Block Solver ILU,ILUT,INVK,INVT,AINV
|
||||||
|
NONE If ILU : MILU or NONE otherwise ignored
|
||||||
|
NONE Scaling if ILUT: NONE, MAXVAL otherwise ignored
|
||||||
|
0 Level of fill for forward factorization
|
||||||
|
1 Level of fill for inverse factorization (only INVK,INVT)
|
||||||
|
1E-1 Threshold for forward factorization
|
||||||
|
1E-1 Threshold for inverse factorization (Only INVK, INVT)
|
||||||
|
LLK Orthogonalization algorithm (only AINV)
|
||||||
@ -0,0 +1,33 @@
|
|||||||
|
INSTALLDIR=../..
|
||||||
|
INCDIR=$(INSTALLDIR)/include/
|
||||||
|
MODDIR=$(INSTALLDIR)/modules/
|
||||||
|
include $(INCDIR)/Make.inc.psblas
|
||||||
|
#
|
||||||
|
# Libraries used
|
||||||
|
#
|
||||||
|
LIBDIR=$(INSTALLDIR)/lib/
|
||||||
|
PSBLAS_LIB= -L$(LIBDIR) -lpsb_util -lpsb_linsolve -lpsb_prec -lpsb_base
|
||||||
|
LDLIBS=$(PSBLDLIBS)
|
||||||
|
|
||||||
|
FINCLUDES=$(FMFLAG)$(MODDIR) $(FMFLAG).
|
||||||
|
|
||||||
|
TOBJS=psb_spmv_overlap_test.o spmv_overlap.o
|
||||||
|
|
||||||
|
EXEDIR=./runs
|
||||||
|
|
||||||
|
all: runsd spmv_overlap
|
||||||
|
|
||||||
|
runsd:
|
||||||
|
(if test ! -d runs ; then mkdir runs; fi)
|
||||||
|
|
||||||
|
spmv_overlap: $(TOBJS)
|
||||||
|
$(FLINK) $(LOPT) $(TOBJS) -o spmv_overlap $(PSBLAS_LIB) $(LDLIBS)
|
||||||
|
/bin/mv spmv_overlap $(EXEDIR)
|
||||||
|
|
||||||
|
clean:
|
||||||
|
/bin/rm -f $(TOBJS) $(TOBJS_API) *$(.mod) $(EXEDIR)/spmv_overlap
|
||||||
|
|
||||||
|
lib:
|
||||||
|
(cd ../../; make library)
|
||||||
|
verycleanlib:
|
||||||
|
(cd ../../; make veryclean)
|
||||||
@ -0,0 +1,21 @@
|
|||||||
|
spmv overlap communication test
|
||||||
|
===============================
|
||||||
|
|
||||||
|
This test was added after introducing different communication schemes in PSBLAS.
|
||||||
|
|
||||||
|
It exercises the overlapped SpMV communication path inside `psb_spmm`.
|
||||||
|
|
||||||
|
Communication pattern:
|
||||||
|
|
||||||
|
- split exchange/computation flow (`start` + local compute + `wait`)
|
||||||
|
- halo/overlap update through internal swap routines used by SpMV kernels
|
||||||
|
- same matrix/vector workload repeated across schemes for timing comparison
|
||||||
|
|
||||||
|
Communication schemes compared:
|
||||||
|
|
||||||
|
- `psb_comm_isend_irecv_`
|
||||||
|
- `psb_comm_ineighbor_alltoallv_`
|
||||||
|
- `psb_comm_persistent_ineighbor_alltoallv_`
|
||||||
|
|
||||||
|
Unlike `swapdata/`, which checks direct halo exchange, this test covers the
|
||||||
|
overlapped SpMV workflow.
|
||||||
@ -0,0 +1,680 @@
|
|||||||
|
!> Test program for overlapping communication and computation with psb_spmm.
|
||||||
|
!!
|
||||||
|
!! This benchmark compares two equivalent SpMV paths:
|
||||||
|
!! 1. Serialized halo exchange + compute
|
||||||
|
!! 2. Overlapped psb_spmm(..., doswap=.true.)
|
||||||
|
!!
|
||||||
|
module psb_spmv_overlap_test
|
||||||
|
|
||||||
|
use psb_base_mod
|
||||||
|
use psb_util_mod
|
||||||
|
use psb_comm_factory_mod, only: psb_comm_init
|
||||||
|
use psb_comm_schemes_mod, only: psb_comm_isend_irecv_, psb_comm_ineighbor_alltoallv_, &
|
||||||
|
& psb_comm_persistent_ineighbor_alltoallv_
|
||||||
|
|
||||||
|
implicit none
|
||||||
|
|
||||||
|
interface
|
||||||
|
function d_func_3d(x,y,z) result(val)
|
||||||
|
import :: psb_dpk_
|
||||||
|
real(psb_dpk_), intent(in) :: x,y,z
|
||||||
|
real(psb_dpk_) :: val
|
||||||
|
end function d_func_3d
|
||||||
|
end interface
|
||||||
|
|
||||||
|
contains
|
||||||
|
|
||||||
|
|
||||||
|
function d_null_func_3d(x,y,z) result(val)
|
||||||
|
|
||||||
|
real(psb_dpk_), intent(in) :: x,y,z
|
||||||
|
real(psb_dpk_) :: val
|
||||||
|
|
||||||
|
val = dzero
|
||||||
|
|
||||||
|
end function d_null_func_3d
|
||||||
|
!
|
||||||
|
! functions parametrizing the differential equation
|
||||||
|
!
|
||||||
|
|
||||||
|
!
|
||||||
|
! Note: b1, b2 and b3 are the coefficients of the first
|
||||||
|
! derivative of the unknown function. The default
|
||||||
|
! we apply here is to have them zero, so that the resulting
|
||||||
|
! matrix is symmetric/hermitian and suitable for
|
||||||
|
! testing with CG and FCG.
|
||||||
|
! When testing methods for non-hermitian matrices you can
|
||||||
|
! change the B1/B2/B3 functions to e.g. done/sqrt((3*done))
|
||||||
|
!
|
||||||
|
function b1(x,y,z)
|
||||||
|
use psb_base_mod, only : psb_dpk_, done, dzero
|
||||||
|
implicit none
|
||||||
|
real(psb_dpk_) :: b1
|
||||||
|
real(psb_dpk_), intent(in) :: x,y,z
|
||||||
|
b1=dzero
|
||||||
|
end function b1
|
||||||
|
function b2(x,y,z)
|
||||||
|
use psb_base_mod, only : psb_dpk_, done, dzero
|
||||||
|
implicit none
|
||||||
|
real(psb_dpk_) :: b2
|
||||||
|
real(psb_dpk_), intent(in) :: x,y,z
|
||||||
|
b2=dzero
|
||||||
|
end function b2
|
||||||
|
function b3(x,y,z)
|
||||||
|
use psb_base_mod, only : psb_dpk_, done, dzero
|
||||||
|
implicit none
|
||||||
|
real(psb_dpk_) :: b3
|
||||||
|
real(psb_dpk_), intent(in) :: x,y,z
|
||||||
|
b3=dzero
|
||||||
|
end function b3
|
||||||
|
function c(x,y,z)
|
||||||
|
use psb_base_mod, only : psb_dpk_, done, dzero
|
||||||
|
implicit none
|
||||||
|
real(psb_dpk_) :: c
|
||||||
|
real(psb_dpk_), intent(in) :: x,y,z
|
||||||
|
c=dzero
|
||||||
|
end function c
|
||||||
|
function a1(x,y,z)
|
||||||
|
use psb_base_mod, only : psb_dpk_, done, dzero
|
||||||
|
implicit none
|
||||||
|
real(psb_dpk_) :: a1
|
||||||
|
real(psb_dpk_), intent(in) :: x,y,z
|
||||||
|
a1=done/80
|
||||||
|
end function a1
|
||||||
|
function a2(x,y,z)
|
||||||
|
use psb_base_mod, only : psb_dpk_, done, dzero
|
||||||
|
implicit none
|
||||||
|
real(psb_dpk_) :: a2
|
||||||
|
real(psb_dpk_), intent(in) :: x,y,z
|
||||||
|
a2=done/80
|
||||||
|
end function a2
|
||||||
|
function a3(x,y,z)
|
||||||
|
use psb_base_mod, only : psb_dpk_, done, dzero
|
||||||
|
implicit none
|
||||||
|
real(psb_dpk_) :: a3
|
||||||
|
real(psb_dpk_), intent(in) :: x,y,z
|
||||||
|
a3=done/80
|
||||||
|
end function a3
|
||||||
|
function g(x,y,z)
|
||||||
|
use psb_base_mod, only : psb_dpk_, done, dzero
|
||||||
|
implicit none
|
||||||
|
real(psb_dpk_) :: g
|
||||||
|
real(psb_dpk_), intent(in) :: x,y,z
|
||||||
|
g = dzero
|
||||||
|
if (x == done) then
|
||||||
|
g = done
|
||||||
|
else if (x == dzero) then
|
||||||
|
g = exp(y**2-z**2)
|
||||||
|
end if
|
||||||
|
end function g
|
||||||
|
|
||||||
|
!
|
||||||
|
! subroutine to allocate and fill in the coefficient matrix and
|
||||||
|
! the rhs.
|
||||||
|
!
|
||||||
|
subroutine psb_d_gen_pde3d(ctxt,idim,a,bv,xv,desc_a,afmt,info,&
|
||||||
|
& f,amold,vmold,imold,partition,nrl,iv,tnd)
|
||||||
|
use psb_base_mod
|
||||||
|
use psb_util_mod
|
||||||
|
!
|
||||||
|
! Discretizes the partial differential equation
|
||||||
|
!
|
||||||
|
! a1 dd(u) a2 dd(u) a3 dd(u) b1 d(u) b2 d(u) b3 d(u)
|
||||||
|
! - ------ - ------ - ------ + ----- + ------ + ------ + c u = f
|
||||||
|
! dxdx dydy dzdz dx dy dz
|
||||||
|
!
|
||||||
|
! with Dirichlet boundary conditions
|
||||||
|
! u = g
|
||||||
|
!
|
||||||
|
! on the unit cube 0<=x,y,z<=1.
|
||||||
|
!
|
||||||
|
!
|
||||||
|
! Note that if b1=b2=b3=c=0., the PDE is the Laplace equation.
|
||||||
|
!
|
||||||
|
implicit none
|
||||||
|
integer(psb_ipk_) :: idim
|
||||||
|
type(psb_dspmat_type) :: a
|
||||||
|
type(psb_d_vect_type) :: xv,bv
|
||||||
|
type(psb_desc_type) :: desc_a
|
||||||
|
type(psb_ctxt_type) :: ctxt
|
||||||
|
integer(psb_ipk_) :: info
|
||||||
|
character(len=*) :: afmt
|
||||||
|
procedure(d_func_3d), optional :: f
|
||||||
|
class(psb_d_base_sparse_mat), optional :: amold
|
||||||
|
class(psb_d_base_vect_type), optional :: vmold
|
||||||
|
class(psb_i_base_vect_type), optional :: imold
|
||||||
|
integer(psb_ipk_), optional :: partition, nrl,iv(:)
|
||||||
|
logical, optional :: tnd
|
||||||
|
! Local variables.
|
||||||
|
|
||||||
|
integer(psb_ipk_), parameter :: nb=20
|
||||||
|
type(psb_d_csc_sparse_mat) :: acsc
|
||||||
|
type(psb_d_coo_sparse_mat) :: acoo
|
||||||
|
type(psb_d_csr_sparse_mat) :: acsr
|
||||||
|
real(psb_dpk_) :: zt(nb),x,y,z
|
||||||
|
integer(psb_ipk_) :: nnz,nr,nlr,i,j,ii,ib,k, partition_
|
||||||
|
integer(psb_lpk_) :: m,n,glob_row,nt
|
||||||
|
integer(psb_ipk_) :: ix,iy,iz,ia,indx_owner
|
||||||
|
! For 3D partition
|
||||||
|
! Note: integer control variables going directly into an MPI call
|
||||||
|
! must be 4 bytes, i.e. psb_mpk_
|
||||||
|
integer(psb_mpk_) :: npdims(3), npp, minfo
|
||||||
|
integer(psb_ipk_) :: npx,npy,npz, iamx,iamy,iamz,mynx,myny,mynz
|
||||||
|
integer(psb_ipk_), allocatable :: bndx(:),bndy(:),bndz(:)
|
||||||
|
! Process grid
|
||||||
|
integer(psb_ipk_) :: np, iam, nth
|
||||||
|
integer(psb_ipk_) :: icoeff
|
||||||
|
integer(psb_lpk_), allocatable :: irow(:),icol(:),myidx(:)
|
||||||
|
real(psb_dpk_), allocatable :: val(:)
|
||||||
|
! deltah dimension of each grid cell
|
||||||
|
! deltat discretization time
|
||||||
|
real(psb_dpk_) :: deltah, sqdeltah, deltah2
|
||||||
|
real(psb_dpk_), parameter :: rhs=dzero,one=done,zero=dzero
|
||||||
|
real(psb_dpk_) :: t0, t1, t2, t3, tasb, talc, ttot, tgen, tcdasb
|
||||||
|
integer(psb_ipk_) :: err_act
|
||||||
|
procedure(d_func_3d), pointer :: f_
|
||||||
|
logical :: tnd_
|
||||||
|
character(len=20) :: name, ch_err,tmpfmt
|
||||||
|
|
||||||
|
info = psb_success_
|
||||||
|
name = 'create_matrix'
|
||||||
|
call psb_erractionsave(err_act)
|
||||||
|
|
||||||
|
call psb_info(ctxt, iam, np)
|
||||||
|
|
||||||
|
|
||||||
|
if (present(f)) then
|
||||||
|
f_ => f
|
||||||
|
else
|
||||||
|
f_ => d_null_func_3d
|
||||||
|
end if
|
||||||
|
|
||||||
|
deltah = done/(idim+1)
|
||||||
|
sqdeltah = deltah*deltah
|
||||||
|
deltah2 = (2*done)* deltah
|
||||||
|
|
||||||
|
if (present(partition)) then
|
||||||
|
if ((1<= partition).and.(partition <= 3)) then
|
||||||
|
partition_ = partition
|
||||||
|
else
|
||||||
|
write(*,*) 'Invalid partition choice ',partition,' defaulting to 3'
|
||||||
|
partition_ = 3
|
||||||
|
end if
|
||||||
|
else
|
||||||
|
partition_ = 3
|
||||||
|
end if
|
||||||
|
|
||||||
|
! initialize array descriptor and sparse matrix storage. provide an
|
||||||
|
! estimate of the number of non zeroes
|
||||||
|
|
||||||
|
m = (1_psb_lpk_*idim)*idim*idim
|
||||||
|
n = m
|
||||||
|
nnz = ((n*7)/(np))
|
||||||
|
if(iam == psb_root_) write(psb_out_unit,'("Generating Matrix (size=",i0,")...")')n
|
||||||
|
t0 = psb_wtime()
|
||||||
|
select case(partition_)
|
||||||
|
case(1)
|
||||||
|
! A BLOCK partition
|
||||||
|
if (present(nrl)) then
|
||||||
|
nr = nrl
|
||||||
|
else
|
||||||
|
!
|
||||||
|
! Using a simple BLOCK distribution.
|
||||||
|
!
|
||||||
|
nt = (m+np-1)/np
|
||||||
|
nr = max(0,min(nt,m-(iam*nt)))
|
||||||
|
end if
|
||||||
|
|
||||||
|
nt = nr
|
||||||
|
call psb_sum(ctxt,nt)
|
||||||
|
if (nt /= m) then
|
||||||
|
write(psb_err_unit,*) iam, 'Initialization error ',nr,nt,m
|
||||||
|
info = -1
|
||||||
|
call psb_barrier(ctxt)
|
||||||
|
call psb_abort(ctxt)
|
||||||
|
return
|
||||||
|
end if
|
||||||
|
|
||||||
|
!
|
||||||
|
! First example of use of CDALL: specify for each process a number of
|
||||||
|
! contiguous rows
|
||||||
|
!
|
||||||
|
call psb_cdall(ctxt,desc_a,info,nl=nr)
|
||||||
|
myidx = desc_a%get_global_indices()
|
||||||
|
nlr = size(myidx)
|
||||||
|
|
||||||
|
case(2)
|
||||||
|
! A partition defined by the user through IV
|
||||||
|
|
||||||
|
if (present(iv)) then
|
||||||
|
if (size(iv) /= m) then
|
||||||
|
write(psb_err_unit,*) iam, 'Initialization error: wrong IV size',size(iv),m
|
||||||
|
info = -1
|
||||||
|
call psb_barrier(ctxt)
|
||||||
|
call psb_abort(ctxt)
|
||||||
|
return
|
||||||
|
end if
|
||||||
|
else
|
||||||
|
write(psb_err_unit,*) iam, 'Initialization error: IV not present'
|
||||||
|
info = -1
|
||||||
|
call psb_barrier(ctxt)
|
||||||
|
call psb_abort(ctxt)
|
||||||
|
return
|
||||||
|
end if
|
||||||
|
|
||||||
|
!
|
||||||
|
! Second example of use of CDALL: specify for each row the
|
||||||
|
! process that owns it
|
||||||
|
!
|
||||||
|
call psb_cdall(ctxt,desc_a,info,vg=iv)
|
||||||
|
myidx = desc_a%get_global_indices()
|
||||||
|
nlr = size(myidx)
|
||||||
|
|
||||||
|
case(3)
|
||||||
|
! A 3-dimensional partition
|
||||||
|
|
||||||
|
! A nifty MPI function will split the process list
|
||||||
|
npdims = 0
|
||||||
|
call mpi_dims_create(np,3,npdims,info)
|
||||||
|
npx = npdims(1)
|
||||||
|
npy = npdims(2)
|
||||||
|
npz = npdims(3)
|
||||||
|
|
||||||
|
allocate(bndx(0:npx),bndy(0:npy),bndz(0:npz))
|
||||||
|
! We can reuse idx2ijk for process indices as well.
|
||||||
|
call idx2ijk(iamx,iamy,iamz,iam,npx,npy,npz,base=0)
|
||||||
|
! Now let's split the 3D cube in hexahedra
|
||||||
|
call dist1Didx(bndx,idim,npx)
|
||||||
|
mynx = bndx(iamx+1)-bndx(iamx)
|
||||||
|
call dist1Didx(bndy,idim,npy)
|
||||||
|
myny = bndy(iamy+1)-bndy(iamy)
|
||||||
|
call dist1Didx(bndz,idim,npz)
|
||||||
|
mynz = bndz(iamz+1)-bndz(iamz)
|
||||||
|
|
||||||
|
! How many indices do I own?
|
||||||
|
nlr = mynx*myny*mynz
|
||||||
|
allocate(myidx(nlr))
|
||||||
|
! Now, let's generate the list of indices I own
|
||||||
|
nr = 0
|
||||||
|
do i=bndx(iamx),bndx(iamx+1)-1
|
||||||
|
do j=bndy(iamy),bndy(iamy+1)-1
|
||||||
|
do k=bndz(iamz),bndz(iamz+1)-1
|
||||||
|
nr = nr + 1
|
||||||
|
call ijk2idx(myidx(nr),i,j,k,idim,idim,idim)
|
||||||
|
end do
|
||||||
|
end do
|
||||||
|
end do
|
||||||
|
if (nr /= nlr) then
|
||||||
|
write(psb_err_unit,*) iam,iamx,iamy,iamz, 'Initialization error: NR vs NLR ',&
|
||||||
|
& nr,nlr,mynx,myny,mynz
|
||||||
|
info = -1
|
||||||
|
call psb_barrier(ctxt)
|
||||||
|
call psb_abort(ctxt)
|
||||||
|
end if
|
||||||
|
|
||||||
|
!
|
||||||
|
! Third example of use of CDALL: specify for each process
|
||||||
|
! the set of global indices it owns.
|
||||||
|
!
|
||||||
|
call psb_cdall(ctxt,desc_a,info,vl=myidx)
|
||||||
|
|
||||||
|
case default
|
||||||
|
write(psb_err_unit,*) iam, 'Initialization error: should not get here'
|
||||||
|
info = -1
|
||||||
|
call psb_barrier(ctxt)
|
||||||
|
call psb_abort(ctxt)
|
||||||
|
return
|
||||||
|
end select
|
||||||
|
|
||||||
|
|
||||||
|
if (info == psb_success_) call psb_spall(a,desc_a,info,nnz=nnz)
|
||||||
|
! define rhs from boundary conditions; also build initial guess
|
||||||
|
if (info == psb_success_) call psb_geall(xv,desc_a,info)
|
||||||
|
if (info == psb_success_) call psb_geall(bv,desc_a,info)
|
||||||
|
|
||||||
|
call psb_barrier(ctxt)
|
||||||
|
talc = psb_wtime()-t0
|
||||||
|
|
||||||
|
if (info /= psb_success_) then
|
||||||
|
info=psb_err_from_subroutine_
|
||||||
|
ch_err='allocation rout.'
|
||||||
|
call psb_errpush(info,name,a_err=ch_err)
|
||||||
|
goto 9999
|
||||||
|
end if
|
||||||
|
|
||||||
|
! we build an auxiliary matrix consisting of one row at a
|
||||||
|
! time; just a small matrix. might be extended to generate
|
||||||
|
! a bunch of rows per call.
|
||||||
|
!
|
||||||
|
allocate(val(20*nb),irow(20*nb),&
|
||||||
|
&icol(20*nb),stat=info)
|
||||||
|
if (info /= psb_success_ ) then
|
||||||
|
info=psb_err_alloc_dealloc_
|
||||||
|
call psb_errpush(info,name)
|
||||||
|
goto 9999
|
||||||
|
endif
|
||||||
|
|
||||||
|
|
||||||
|
! loop over rows belonging to current process in a block
|
||||||
|
! distribution.
|
||||||
|
|
||||||
|
call psb_barrier(ctxt)
|
||||||
|
t1 = psb_wtime()
|
||||||
|
do ii=1, nlr,nb
|
||||||
|
ib = min(nb,nlr-ii+1)
|
||||||
|
icoeff = 1
|
||||||
|
do k=1,ib
|
||||||
|
i=ii+k-1
|
||||||
|
! local matrix pointer
|
||||||
|
glob_row=myidx(i)
|
||||||
|
! compute gridpoint coordinates
|
||||||
|
call idx2ijk(ix,iy,iz,glob_row,idim,idim,idim)
|
||||||
|
! x, y, z coordinates
|
||||||
|
x = (ix-1)*deltah
|
||||||
|
y = (iy-1)*deltah
|
||||||
|
z = (iz-1)*deltah
|
||||||
|
zt(k) = f_(x,y,z)
|
||||||
|
! internal point: build discretization
|
||||||
|
!
|
||||||
|
! term depending on (x-1,y,z)
|
||||||
|
!
|
||||||
|
val(icoeff) = -a1(x,y,z)/sqdeltah-b1(x,y,z)/deltah2
|
||||||
|
if (ix == 1) then
|
||||||
|
zt(k) = g(dzero,y,z)*(-val(icoeff)) + zt(k)
|
||||||
|
else
|
||||||
|
call ijk2idx(icol(icoeff),ix-1,iy,iz,idim,idim,idim)
|
||||||
|
irow(icoeff) = glob_row
|
||||||
|
icoeff = icoeff+1
|
||||||
|
endif
|
||||||
|
! term depending on (x,y-1,z)
|
||||||
|
val(icoeff) = -a2(x,y,z)/sqdeltah-b2(x,y,z)/deltah2
|
||||||
|
if (iy == 1) then
|
||||||
|
zt(k) = g(x,dzero,z)*(-val(icoeff)) + zt(k)
|
||||||
|
else
|
||||||
|
call ijk2idx(icol(icoeff),ix,iy-1,iz,idim,idim,idim)
|
||||||
|
irow(icoeff) = glob_row
|
||||||
|
icoeff = icoeff+1
|
||||||
|
endif
|
||||||
|
! term depending on (x,y,z-1)
|
||||||
|
val(icoeff)=-a3(x,y,z)/sqdeltah-b3(x,y,z)/deltah2
|
||||||
|
if (iz == 1) then
|
||||||
|
zt(k) = g(x,y,dzero)*(-val(icoeff)) + zt(k)
|
||||||
|
else
|
||||||
|
call ijk2idx(icol(icoeff),ix,iy,iz-1,idim,idim,idim)
|
||||||
|
irow(icoeff) = glob_row
|
||||||
|
icoeff = icoeff+1
|
||||||
|
endif
|
||||||
|
|
||||||
|
! term depending on (x,y,z)
|
||||||
|
val(icoeff)=(2*done)*(a1(x,y,z)+a2(x,y,z)+a3(x,y,z))/sqdeltah &
|
||||||
|
& + c(x,y,z)
|
||||||
|
call ijk2idx(icol(icoeff),ix,iy,iz,idim,idim,idim)
|
||||||
|
irow(icoeff) = glob_row
|
||||||
|
icoeff = icoeff+1
|
||||||
|
! term depending on (x,y,z+1)
|
||||||
|
val(icoeff)=-a3(x,y,z)/sqdeltah+b3(x,y,z)/deltah2
|
||||||
|
if (iz == idim) then
|
||||||
|
zt(k) = g(x,y,done)*(-val(icoeff)) + zt(k)
|
||||||
|
else
|
||||||
|
call ijk2idx(icol(icoeff),ix,iy,iz+1,idim,idim,idim)
|
||||||
|
irow(icoeff) = glob_row
|
||||||
|
icoeff = icoeff+1
|
||||||
|
endif
|
||||||
|
! term depending on (x,y+1,z)
|
||||||
|
val(icoeff)=-a2(x,y,z)/sqdeltah+b2(x,y,z)/deltah2
|
||||||
|
if (iy == idim) then
|
||||||
|
zt(k) = g(x,done,z)*(-val(icoeff)) + zt(k)
|
||||||
|
else
|
||||||
|
call ijk2idx(icol(icoeff),ix,iy+1,iz,idim,idim,idim)
|
||||||
|
irow(icoeff) = glob_row
|
||||||
|
icoeff = icoeff+1
|
||||||
|
endif
|
||||||
|
! term depending on (x+1,y,z)
|
||||||
|
val(icoeff)=-a1(x,y,z)/sqdeltah+b1(x,y,z)/deltah2
|
||||||
|
if (ix==idim) then
|
||||||
|
zt(k) = g(done,y,z)*(-val(icoeff)) + zt(k)
|
||||||
|
else
|
||||||
|
call ijk2idx(icol(icoeff),ix+1,iy,iz,idim,idim,idim)
|
||||||
|
irow(icoeff) = glob_row
|
||||||
|
icoeff = icoeff+1
|
||||||
|
endif
|
||||||
|
|
||||||
|
end do
|
||||||
|
call psb_spins(icoeff-1,irow,icol,val,a,desc_a,info)
|
||||||
|
if(info /= psb_success_) exit
|
||||||
|
call psb_geins(ib,myidx(ii:ii+ib-1),zt(1:ib),bv,desc_a,info)
|
||||||
|
if(info /= psb_success_) exit
|
||||||
|
zt(:)=dzero
|
||||||
|
call psb_geins(ib,myidx(ii:ii+ib-1),zt(1:ib),xv,desc_a,info)
|
||||||
|
if(info /= psb_success_) exit
|
||||||
|
end do
|
||||||
|
|
||||||
|
tgen = psb_wtime()-t1
|
||||||
|
if(info /= psb_success_) then
|
||||||
|
info=psb_err_from_subroutine_
|
||||||
|
ch_err='insert rout.'
|
||||||
|
call psb_errpush(info,name,a_err=ch_err)
|
||||||
|
goto 9999
|
||||||
|
end if
|
||||||
|
|
||||||
|
deallocate(val,irow,icol)
|
||||||
|
|
||||||
|
call psb_barrier(ctxt)
|
||||||
|
t1 = psb_wtime()
|
||||||
|
call psb_cdasb(desc_a,info,mold=imold)
|
||||||
|
tcdasb = psb_wtime()-t1
|
||||||
|
call psb_barrier(ctxt)
|
||||||
|
t1 = psb_wtime()
|
||||||
|
if (info == psb_success_) then
|
||||||
|
if (present(amold)) then
|
||||||
|
call psb_spasb(a,desc_a,info,mold=amold,bld_and=tnd)
|
||||||
|
else
|
||||||
|
call psb_spasb(a,desc_a,info,afmt=afmt,bld_and=tnd)
|
||||||
|
end if
|
||||||
|
end if
|
||||||
|
call psb_barrier(ctxt)
|
||||||
|
if(info /= psb_success_) then
|
||||||
|
info=psb_err_from_subroutine_
|
||||||
|
ch_err='asb rout.'
|
||||||
|
call psb_errpush(info,name,a_err=ch_err)
|
||||||
|
goto 9999
|
||||||
|
end if
|
||||||
|
if (info == psb_success_) call psb_geasb(xv,desc_a,info,mold=vmold)
|
||||||
|
if (info == psb_success_) call psb_geasb(bv,desc_a,info,mold=vmold)
|
||||||
|
if(info /= psb_success_) then
|
||||||
|
info=psb_err_from_subroutine_
|
||||||
|
ch_err='asb rout.'
|
||||||
|
call psb_errpush(info,name,a_err=ch_err)
|
||||||
|
goto 9999
|
||||||
|
end if
|
||||||
|
tasb = psb_wtime()-t1
|
||||||
|
call psb_barrier(ctxt)
|
||||||
|
ttot = psb_wtime() - t0
|
||||||
|
|
||||||
|
call psb_amx(ctxt,talc)
|
||||||
|
call psb_amx(ctxt,tgen)
|
||||||
|
call psb_amx(ctxt,tasb)
|
||||||
|
call psb_amx(ctxt,ttot)
|
||||||
|
if(iam == psb_root_) then
|
||||||
|
tmpfmt = a%get_fmt()
|
||||||
|
write(psb_out_unit,'("The matrix has been generated and assembled in ",a3," format.")')&
|
||||||
|
& tmpfmt
|
||||||
|
write(psb_out_unit,'("-allocation time : ",es12.5)') talc
|
||||||
|
write(psb_out_unit,'("-coeff. gen. time : ",es12.5)') tgen
|
||||||
|
write(psb_out_unit,'("-desc asbly time : ",es12.5)') tcdasb
|
||||||
|
write(psb_out_unit,'("- mat asbly time : ",es12.5)') tasb
|
||||||
|
write(psb_out_unit,'("-total time : ",es12.5)') ttot
|
||||||
|
|
||||||
|
end if
|
||||||
|
call psb_erractionrestore(err_act)
|
||||||
|
return
|
||||||
|
|
||||||
|
9999 call psb_error_handler(ctxt,err_act)
|
||||||
|
|
||||||
|
return
|
||||||
|
end subroutine psb_d_gen_pde3d
|
||||||
|
|
||||||
|
subroutine psb_spmv_overlap_kernel(ctxt)
|
||||||
|
use psb_base_mod
|
||||||
|
use psb_util_mod
|
||||||
|
|
||||||
|
implicit none
|
||||||
|
|
||||||
|
type(psb_ctxt_type), intent(in) :: ctxt
|
||||||
|
real(psb_dpk_) :: alpha, beta
|
||||||
|
|
||||||
|
type(psb_dspmat_type) :: a
|
||||||
|
type(psb_d_vect_type) :: x_baseline, x_neighbor, x_persistent
|
||||||
|
type(psb_d_vect_type) :: y_baseline, y_neighbor, y_persistent
|
||||||
|
type(psb_desc_type) :: desc_a
|
||||||
|
|
||||||
|
character(len=:), allocatable :: output_file_name
|
||||||
|
character(len=32) :: idim_str
|
||||||
|
real(psb_dpk_), allocatable :: x_global(:), y_global(:)
|
||||||
|
integer(psb_ipk_) :: my_rank, np, info, err_act
|
||||||
|
integer(psb_ipk_) :: n_global, idim
|
||||||
|
integer(psb_ipk_) :: i, times
|
||||||
|
real(psb_dpk_) :: t0, t1, dt
|
||||||
|
real(psb_dpk_) :: tsum_baseline, tsum_neighbor, tsum_persistent
|
||||||
|
real(psb_dpk_) :: err_bn, err_bp, tol
|
||||||
|
logical :: tnd
|
||||||
|
|
||||||
|
info = psb_success_
|
||||||
|
tol = 1.0d-10
|
||||||
|
times = 100
|
||||||
|
tsum_baseline = 0.0_psb_dpk_
|
||||||
|
tsum_neighbor = 0.0_psb_dpk_
|
||||||
|
tsum_persistent = 0.0_psb_dpk_
|
||||||
|
tnd = .false.
|
||||||
|
idim = 10
|
||||||
|
n_global = idim * idim * idim
|
||||||
|
alpha = done
|
||||||
|
beta = dzero
|
||||||
|
|
||||||
|
call psb_info(ctxt, my_rank, np)
|
||||||
|
|
||||||
|
|
||||||
|
call psb_barrier(ctxt)
|
||||||
|
call psb_d_gen_pde3d(ctxt,idim,a,y_baseline,x_baseline,desc_a,"CSR",info,partition=1)
|
||||||
|
|
||||||
|
if (info /= psb_success_) goto 9999
|
||||||
|
call psb_barrier(ctxt)
|
||||||
|
|
||||||
|
if (my_rank == psb_root_) then
|
||||||
|
allocate(x_global(n_global))
|
||||||
|
allocate(y_global(n_global))
|
||||||
|
do i = 1, n_global
|
||||||
|
x_global(i) = real(mod(i,17)+1, psb_dpk_) / real(17, psb_dpk_)
|
||||||
|
y_global(i) = real(mod(i,13), psb_dpk_) / real(29, psb_dpk_)
|
||||||
|
end do
|
||||||
|
end if
|
||||||
|
|
||||||
|
call psb_geall(x_neighbor, desc_a, info)
|
||||||
|
call psb_geall(x_persistent, desc_a, info)
|
||||||
|
call psb_geall(y_neighbor, desc_a, info)
|
||||||
|
call psb_geall(y_persistent, desc_a, info)
|
||||||
|
if (info /= psb_success_) goto 9999
|
||||||
|
|
||||||
|
call psb_scatter(x_global, x_baseline, desc_a, info, root=psb_root_)
|
||||||
|
call psb_scatter(x_global, x_neighbor, desc_a, info, root=psb_root_)
|
||||||
|
call psb_scatter(x_global, x_persistent, desc_a, info, root=psb_root_)
|
||||||
|
call psb_scatter(y_global, y_baseline, desc_a, info, root=psb_root_)
|
||||||
|
call psb_scatter(y_global, y_neighbor, desc_a, info, root=psb_root_)
|
||||||
|
call psb_scatter(y_global, y_persistent, desc_a, info, root=psb_root_)
|
||||||
|
if (info /= psb_success_) goto 9999
|
||||||
|
|
||||||
|
! Set communication schemes on the x vectors used by psb_spmm.
|
||||||
|
call psb_comm_init(psb_comm_isend_irecv_, x_baseline%v%comm_handle, info)
|
||||||
|
if (info /= psb_success_) goto 9999
|
||||||
|
call psb_comm_init(psb_comm_ineighbor_alltoallv_, x_neighbor%v%comm_handle, info)
|
||||||
|
if (info /= psb_success_) goto 9999
|
||||||
|
call psb_comm_init(psb_comm_persistent_ineighbor_alltoallv_, x_persistent%v%comm_handle, info)
|
||||||
|
if (info /= psb_success_) goto 9999
|
||||||
|
|
||||||
|
! Warm-up all schemes once.
|
||||||
|
call psb_spmm(alpha, a, x_baseline, beta, y_baseline, desc_a, info, doswap=.true.)
|
||||||
|
call psb_spmm(alpha, a, x_neighbor, beta, y_neighbor, desc_a, info, doswap=.true.)
|
||||||
|
call psb_spmm(alpha, a, x_persistent, beta, y_persistent, desc_a, info, doswap=.true.)
|
||||||
|
if (info /= psb_success_) goto 9999
|
||||||
|
|
||||||
|
! Restore vectors so timed loops start from same initial state.
|
||||||
|
call psb_scatter(x_global, x_baseline, desc_a, info, root=psb_root_)
|
||||||
|
call psb_scatter(x_global, x_neighbor, desc_a, info, root=psb_root_)
|
||||||
|
call psb_scatter(x_global, x_persistent, desc_a, info, root=psb_root_)
|
||||||
|
call psb_scatter(y_global, y_baseline, desc_a, info, root=psb_root_)
|
||||||
|
call psb_scatter(y_global, y_neighbor, desc_a, info, root=psb_root_)
|
||||||
|
call psb_scatter(y_global, y_persistent, desc_a, info, root=psb_root_)
|
||||||
|
if (info /= psb_success_) goto 9999
|
||||||
|
|
||||||
|
! Baseline (isend/irecv) overlapped SpMV.
|
||||||
|
t0 = psb_wtime()
|
||||||
|
do i = 1, times
|
||||||
|
call psb_spmm(alpha, a, x_baseline, beta, y_baseline, desc_a, info, doswap=.true.)
|
||||||
|
end do
|
||||||
|
t1 = psb_wtime()
|
||||||
|
dt = t1 - t0
|
||||||
|
call psb_amx(ctxt, dt)
|
||||||
|
tsum_baseline = tsum_baseline + dt
|
||||||
|
|
||||||
|
! Neighbor alltoallv overlapped SpMV.
|
||||||
|
t0 = psb_wtime()
|
||||||
|
do i = 1, times
|
||||||
|
call psb_spmm(alpha, a, x_neighbor, beta, y_neighbor, desc_a, info, doswap=.true.)
|
||||||
|
end do
|
||||||
|
t1 = psb_wtime()
|
||||||
|
dt = t1 - t0
|
||||||
|
call psb_amx(ctxt, dt)
|
||||||
|
tsum_neighbor = tsum_neighbor + dt
|
||||||
|
|
||||||
|
! Persistent-neighbor overlapped SpMV.
|
||||||
|
t0 = psb_wtime()
|
||||||
|
do i = 1, times
|
||||||
|
call psb_spmm(alpha, a, x_persistent, beta, y_persistent, desc_a, info, doswap=.true.)
|
||||||
|
end do
|
||||||
|
t1 = psb_wtime()
|
||||||
|
dt = t1 - t0
|
||||||
|
call psb_amx(ctxt, dt)
|
||||||
|
tsum_persistent = tsum_persistent + dt
|
||||||
|
|
||||||
|
err_bn = maxval(abs(y_baseline%get_vect() - y_neighbor%get_vect()))
|
||||||
|
err_bp = maxval(abs(y_baseline%get_vect() - y_persistent%get_vect()))
|
||||||
|
call psb_amx(ctxt, err_bn)
|
||||||
|
call psb_amx(ctxt, err_bp)
|
||||||
|
|
||||||
|
if (my_rank == 0) then
|
||||||
|
write(psb_out_unit,'(" Avg baseline time : ",es12.5)') tsum_baseline / real(times, psb_dpk_)
|
||||||
|
write(psb_out_unit,'(" Tot baseline time : ",es12.5)') tsum_baseline
|
||||||
|
write(psb_out_unit,'(" Avg neighbor time : ",es12.5)') tsum_neighbor / real(times, psb_dpk_)
|
||||||
|
write(psb_out_unit,'(" Tot neighbor time : ",es12.5)') tsum_neighbor
|
||||||
|
write(psb_out_unit,'(" Avg pers-neigh time: ",es12.5)') tsum_persistent / real(times, psb_dpk_)
|
||||||
|
write(psb_out_unit,'(" Tot pers-neigh time: ",es12.5)') tsum_persistent
|
||||||
|
write(psb_out_unit,'(" Check baseline vs neighbor err = ",es12.5)') err_bn
|
||||||
|
write(psb_out_unit,'(" Check baseline vs persistent err = ",es12.5)') err_bp
|
||||||
|
if ((err_bn > tol) .or. (err_bp > tol)) then
|
||||||
|
write(psb_out_unit,'(" WARNING: mismatch exceeds tolerance ",es12.5)') tol
|
||||||
|
end if
|
||||||
|
end if
|
||||||
|
|
||||||
|
call psb_gefree(x_baseline, desc_a, info)
|
||||||
|
call psb_gefree(x_neighbor, desc_a, info)
|
||||||
|
call psb_gefree(x_persistent, desc_a, info)
|
||||||
|
call psb_gefree(y_baseline, desc_a, info)
|
||||||
|
call psb_gefree(y_neighbor, desc_a, info)
|
||||||
|
call psb_gefree(y_persistent, desc_a, info)
|
||||||
|
call psb_spfree(a, desc_a, info)
|
||||||
|
call psb_cdfree(desc_a, info)
|
||||||
|
|
||||||
|
if (my_rank == 0) then
|
||||||
|
deallocate(x_global)
|
||||||
|
deallocate(y_global)
|
||||||
|
end if
|
||||||
|
|
||||||
|
return
|
||||||
|
|
||||||
|
9999 call psb_error(ctxt)
|
||||||
|
call psb_error_handler(ctxt, err_act)
|
||||||
|
|
||||||
|
end subroutine psb_spmv_overlap_kernel
|
||||||
|
|
||||||
|
|
||||||
|
end module psb_spmv_overlap_test
|
||||||
@ -0,0 +1,28 @@
|
|||||||
|
program main
|
||||||
|
use psb_spmv_overlap_test
|
||||||
|
use psb_base_mod
|
||||||
|
|
||||||
|
implicit none
|
||||||
|
|
||||||
|
integer(psb_ipk_) :: my_rank, np
|
||||||
|
integer(psb_ipk_) :: k, h
|
||||||
|
type(psb_ctxt_type) :: ctxt
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
call psb_init(ctxt)
|
||||||
|
call psb_info(ctxt, my_rank, np)
|
||||||
|
|
||||||
|
if (my_rank == psb_root_) then
|
||||||
|
write(psb_out_unit,*) 'Welcome to PSBLAS version: ', psb_version_string_
|
||||||
|
write(psb_out_unit,*) 'This is the psb_spmv_overlap_test sample program'
|
||||||
|
end if
|
||||||
|
|
||||||
|
call psb_barrier(ctxt)
|
||||||
|
|
||||||
|
|
||||||
|
call psb_spmv_overlap_kernel(ctxt)
|
||||||
|
|
||||||
|
|
||||||
|
call psb_exit(ctxt)
|
||||||
|
end program main
|
||||||
@ -0,0 +1,19 @@
|
|||||||
|
swapdata communication test
|
||||||
|
============================
|
||||||
|
|
||||||
|
This test was added after introducing different communication schemes in PSBLAS.
|
||||||
|
|
||||||
|
It focuses on direct halo exchange through the `swapdata` path:
|
||||||
|
|
||||||
|
- index list type: halo (`psb_comm_halo_`)
|
||||||
|
- exchange API: `psi_swapdata`
|
||||||
|
- phases: `start`, `wait`, and `sync` (depending on test section)
|
||||||
|
|
||||||
|
Communication patterns exercised:
|
||||||
|
|
||||||
|
- baseline point-to-point (`isend/irecv`)
|
||||||
|
- neighbor collective (`ineighbor_alltoallv`)
|
||||||
|
- persistent neighbor collective (`persistent_ineighbor_alltoallv`)
|
||||||
|
|
||||||
|
This test validates the low-level communication behavior in isolation, without
|
||||||
|
the full SpMV overlap pipeline.
|
||||||
Loading…
Reference in New Issue