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Optimize data handling in transpose.

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pizdaint-runs
Salvatore Filippone 5 years ago
parent 10f47d731d
commit ae051a2ea1
4 changed files with 804 additions and 336 deletions
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123
base/tools/psb_c_glob_transpose.F90
Unescape Escape View File

@ -61,10 +61,10 @@ subroutine psb_lc_coo_glob_transpose(ain,desc_r,info,atrans,desc_c,desc_rx)
! ...local scalars....
integer(psb_ipk_) :: ictxt, np,me
integer(psb_ipk_) :: counter,proc, j, err_act, inzl
integer(psb_lpk_) :: i, k,idx, r, ipx,mat_recv, iszs, iszr,idxs,idxr,nz,&
integer(psb_ipk_) :: counter,proc, err_act, j
integer(psb_lpk_) :: i, k, idx, r, ipx,mat_recv, iszs, iszr,idxs,idxr,nz,&
& irmin,icmin,irmax,icmax,&
& l1, nsnds, nrcvs, nr,nc,nzl,hlstart, nzt
& l1, nsnds, nrcvs, nr,nc,nzl, hlstart, nzt, nzd, nzbase
integer(psb_mpk_) :: icomm, minfo
integer(psb_mpk_), allocatable :: brvindx(:), &
& rvsz(:), bsdindx(:), sdsz(:), tsdx(:), trvx(:)
@ -196,6 +196,7 @@ subroutine psb_lc_coo_glob_transpose(ain,desc_r,info,atrans,desc_c,desc_rx)
end if
nzl = acoo%get_nzeros()
hlstart = p_desc_c%get_local_rows()
if (.false.) then
do k = 1, nzl
j = acoo%ia(k)
!
@ -279,6 +280,7 @@ subroutine psb_lc_coo_glob_transpose(ain,desc_r,info,atrans,desc_c,desc_rx)
call psb_glob_to_loc(acoo%ja(1:nzl),desc_rx,info,iact='I')
call acoo%set_nrows(p_desc_c%get_local_rows())
call acoo%set_ncols(desc_rx%get_local_cols())
write(0,*) me,' Trans RX ',acoo%get_nrows(),acoo%get_ncols(),acoo%get_nzeros()
else
!
!
@ -292,6 +294,121 @@ subroutine psb_lc_coo_glob_transpose(ain,desc_r,info,atrans,desc_c,desc_rx)
call acoo%set_nrows(p_desc_c%get_local_rows())
call acoo%set_ncols(desc_r%get_local_cols())
write(0,*) me,' Trans R- ',acoo%get_nrows(),acoo%get_ncols(),acoo%get_nzeros()
end if
else
nzd = 0
do k = 1, nzl
j = acoo%ia(k)
if (j<=hlstart) then
nzd = nzd + 1
acoo%ia(nzd) = acoo%ia(k)
acoo%ja(nzd) = acoo%ja(k)
acoo%val(nzd) = acoo%val(k)
else
!
! Put halo entries in global numbering
!
call p_desc_c%indxmap%fnd_halo_owner(j,proc,info)
tsdx(proc+1) = tsdx(proc+1) +1
iasnd(tsdx(proc+1)) = acoo%ia(k)
jasnd(tsdx(proc+1)) = acoo%ja(k)
valsnd(tsdx(proc+1)) = acoo%val(k)
call desc_r%indxmap%l2gip(jasnd(tsdx(proc+1)),info)
call p_desc_c%indxmap%l2gip(iasnd(tsdx(proc+1)),info)
end if
end do
call acoo%set_nzeros(nzd)
!!$ write(0,*) me,' Sanity check before send :',count(acoo%ia(1:nzl)<0),count(acoo%ja(1:nzl)<0),&
!!$ & count(iasnd(1:iszs)<0),count(jasnd(1:iszs)<0)
! And exchange data.
nzl = acoo%get_nzeros()
call acoo%reallocate(nzl+iszr)
#if defined(SP_A2AV_MPI)
call mpi_alltoallv(valsnd,sdsz,bsdindx,psb_mpi_r_dpk_,&
& acoo%val(nzl+1:nzl+iszr),rvsz,brvindx,psb_mpi_r_dpk_,icomm,minfo)
if (minfo == mpi_success) &
& call mpi_alltoallv(iasnd,sdsz,bsdindx,psb_mpi_lpk_,&
& acoo%ia(nzl+1:nzl+iszr),rvsz,brvindx,psb_mpi_lpk_,icomm,minfo)
if (minfo == mpi_success) &
& call mpi_alltoallv(jasnd,sdsz,bsdindx,psb_mpi_lpk_,&
& acoo%ja(nzl+1:nzl+iszr),rvsz,brvindx,psb_mpi_lpk_,icomm,minfo)
if (minfo /= mpi_success) info = minfo
#elif defined(SP_A2AV_XI)
call psb_simple_a2av(valsnd,sdsz,bsdindx,&
& acoo%val(nzl+1:nzl+iszr),rvsz,brvindx,ictxt,info)
if (info == psb_success_) call psb_simple_a2av(iasnd,sdsz,bsdindx,&
& acoo%ia(nzl+1:nzl+iszr),rvsz,brvindx,ictxt,info)
if (info == psb_success_) call psb_simple_a2av(jasnd,sdsz,bsdindx,&
& acoo%ja(nzl+1:nzl+iszr),rvsz,brvindx,ictxt,info)
#elif defined(SP_A2AV_MAT)
call psb_simple_triad_a2av(valsnd,iasnd,jasnd,sdsz,bsdindx,&
& acoo%val(nzl+1:nzl+iszr),acoo%ia(nzl+1:nzl+iszr),&
& acoo%ja(nzl+1:nzl+iszr),rvsz,brvindx,ictxt,info)
!!$ call d_coo_my_a2av(valsnd,iasnd,jasnd,sdsz,bsdindx,&
!!$ & acoo%val(nzl+1:nzl+iszr),acoo%ia(nzl+1:nzl+iszr),&
!!$ & acoo%ja(nzl+1:nzl+iszr),rvsz,brvindx,ictxt,icomm,info)
#else
choke on me @!
#endif
if (info /= psb_success_) then
info=psb_err_from_subroutine_
call psb_errpush(info,name,a_err='mpi_alltoallv')
goto 9999
end if
if (debug_level >= psb_debug_outer_)&
& write(debug_unit,*) me,' ',trim(name),': Done alltoallv'
nzbase = nzl
if (present(desc_rx)) then
!
! Extend the appropriate descriptor; started as R but on
! transpose it now describes C
!
call desc_r%clone(desc_rx,info)
call psb_cd_reinit(desc_rx,info)
!
! Take out non-local rows
!
call psb_glob_to_loc(acoo%ia(nzl+1:nzl+iszr),p_desc_c,info,iact='I',owned=.true.)
call psb_coo_clean_negidx_inner(iszr,acoo%ia(nzl+1:nzl+iszr),acoo%ja(nzl+1:nzl+iszr),&
& acoo%val(nzl+1:nzl+iszr),nzt,info)
call desc_rx%g2lip_ins(acoo%ja(nzl+1:nzl+nzt),info)
call psb_cdasb(desc_rx,info)
nzl = nzl + nzt
call acoo%set_nzeros(nzl)
nzl = acoo%get_nzeros()
call acoo%set_sorted(.false.)
!
! Insert to extend descriptor
!
call acoo%set_nrows(p_desc_c%get_local_rows())
call acoo%set_ncols(desc_rx%get_local_cols())
!write(0,*) me,' Trans RX ',acoo%get_nrows(),acoo%get_ncols(),acoo%get_nzeros()
else
!
!
! Take out non-local rows
!
call psb_glob_to_loc(acoo%ia(nzl+1:nzl+iszr),p_desc_c,info,iact='I',owned=.true.)
call psb_glob_to_loc(acoo%ja(nzl+1:nzl+iszr),desc_r,info,iact='I')
call psb_coo_clean_negidx_inner(iszr,acoo%ia(nzl+1:nzl+iszr),acoo%ja(nzl+1:nzl+iszr),&
& acoo%val(nzl+1:nzl+iszr),nzt,info)
nzl = nzl + nzt
call acoo%set_nzeros(nzl)
nzl = acoo%get_nzeros()
call acoo%set_sorted(.false.)
call acoo%set_nrows(p_desc_c%get_local_rows())
call acoo%set_ncols(desc_r%get_local_cols())
!write(0,*) me,' Trans R- ',acoo%get_nrows(),acoo%get_ncols(),acoo%get_nzeros()
end if
end if
!!$ write(0,*) me,' Sanity check after rx%g2l :',count(acoo%ja(1:nzl)<0)

123
base/tools/psb_d_glob_transpose.F90
Unescape Escape View File

@ -61,10 +61,10 @@ subroutine psb_ld_coo_glob_transpose(ain,desc_r,info,atrans,desc_c,desc_rx)
! ...local scalars....
integer(psb_ipk_) :: ictxt, np,me
integer(psb_ipk_) :: counter,proc, j, err_act, inzl
integer(psb_lpk_) :: i, k,idx, r, ipx,mat_recv, iszs, iszr,idxs,idxr,nz,&
integer(psb_ipk_) :: counter,proc, err_act, j
integer(psb_lpk_) :: i, k, idx, r, ipx,mat_recv, iszs, iszr,idxs,idxr,nz,&
& irmin,icmin,irmax,icmax,&
& l1, nsnds, nrcvs, nr,nc,nzl,hlstart, nzt
& l1, nsnds, nrcvs, nr,nc,nzl, hlstart, nzt, nzd, nzbase
integer(psb_mpk_) :: icomm, minfo
integer(psb_mpk_), allocatable :: brvindx(:), &
& rvsz(:), bsdindx(:), sdsz(:), tsdx(:), trvx(:)
@ -196,6 +196,7 @@ subroutine psb_ld_coo_glob_transpose(ain,desc_r,info,atrans,desc_c,desc_rx)
end if
nzl = acoo%get_nzeros()
hlstart = p_desc_c%get_local_rows()
if (.false.) then
do k = 1, nzl
j = acoo%ia(k)
!
@ -279,6 +280,7 @@ subroutine psb_ld_coo_glob_transpose(ain,desc_r,info,atrans,desc_c,desc_rx)
call psb_glob_to_loc(acoo%ja(1:nzl),desc_rx,info,iact='I')
call acoo%set_nrows(p_desc_c%get_local_rows())
call acoo%set_ncols(desc_rx%get_local_cols())
write(0,*) me,' Trans RX ',acoo%get_nrows(),acoo%get_ncols(),acoo%get_nzeros()
else
!
!
@ -292,6 +294,121 @@ subroutine psb_ld_coo_glob_transpose(ain,desc_r,info,atrans,desc_c,desc_rx)
call acoo%set_nrows(p_desc_c%get_local_rows())
call acoo%set_ncols(desc_r%get_local_cols())
write(0,*) me,' Trans R- ',acoo%get_nrows(),acoo%get_ncols(),acoo%get_nzeros()
end if
else
nzd = 0
do k = 1, nzl
j = acoo%ia(k)
if (j<=hlstart) then
nzd = nzd + 1
acoo%ia(nzd) = acoo%ia(k)
acoo%ja(nzd) = acoo%ja(k)
acoo%val(nzd) = acoo%val(k)
else
!
! Put halo entries in global numbering
!
call p_desc_c%indxmap%fnd_halo_owner(j,proc,info)
tsdx(proc+1) = tsdx(proc+1) +1
iasnd(tsdx(proc+1)) = acoo%ia(k)
jasnd(tsdx(proc+1)) = acoo%ja(k)
valsnd(tsdx(proc+1)) = acoo%val(k)
call desc_r%indxmap%l2gip(jasnd(tsdx(proc+1)),info)
call p_desc_c%indxmap%l2gip(iasnd(tsdx(proc+1)),info)
end if
end do
call acoo%set_nzeros(nzd)
!!$ write(0,*) me,' Sanity check before send :',count(acoo%ia(1:nzl)<0),count(acoo%ja(1:nzl)<0),&
!!$ & count(iasnd(1:iszs)<0),count(jasnd(1:iszs)<0)
! And exchange data.
nzl = acoo%get_nzeros()
call acoo%reallocate(nzl+iszr)
#if defined(SP_A2AV_MPI)
call mpi_alltoallv(valsnd,sdsz,bsdindx,psb_mpi_r_dpk_,&
& acoo%val(nzl+1:nzl+iszr),rvsz,brvindx,psb_mpi_r_dpk_,icomm,minfo)
if (minfo == mpi_success) &
& call mpi_alltoallv(iasnd,sdsz,bsdindx,psb_mpi_lpk_,&
& acoo%ia(nzl+1:nzl+iszr),rvsz,brvindx,psb_mpi_lpk_,icomm,minfo)
if (minfo == mpi_success) &
& call mpi_alltoallv(jasnd,sdsz,bsdindx,psb_mpi_lpk_,&
& acoo%ja(nzl+1:nzl+iszr),rvsz,brvindx,psb_mpi_lpk_,icomm,minfo)
if (minfo /= mpi_success) info = minfo
#elif defined(SP_A2AV_XI)
call psb_simple_a2av(valsnd,sdsz,bsdindx,&
& acoo%val(nzl+1:nzl+iszr),rvsz,brvindx,ictxt,info)
if (info == psb_success_) call psb_simple_a2av(iasnd,sdsz,bsdindx,&
& acoo%ia(nzl+1:nzl+iszr),rvsz,brvindx,ictxt,info)
if (info == psb_success_) call psb_simple_a2av(jasnd,sdsz,bsdindx,&
& acoo%ja(nzl+1:nzl+iszr),rvsz,brvindx,ictxt,info)
#elif defined(SP_A2AV_MAT)
call psb_simple_triad_a2av(valsnd,iasnd,jasnd,sdsz,bsdindx,&
& acoo%val(nzl+1:nzl+iszr),acoo%ia(nzl+1:nzl+iszr),&
& acoo%ja(nzl+1:nzl+iszr),rvsz,brvindx,ictxt,info)
!!$ call d_coo_my_a2av(valsnd,iasnd,jasnd,sdsz,bsdindx,&
!!$ & acoo%val(nzl+1:nzl+iszr),acoo%ia(nzl+1:nzl+iszr),&
!!$ & acoo%ja(nzl+1:nzl+iszr),rvsz,brvindx,ictxt,icomm,info)
#else
choke on me @!
#endif
if (info /= psb_success_) then
info=psb_err_from_subroutine_
call psb_errpush(info,name,a_err='mpi_alltoallv')
goto 9999
end if
if (debug_level >= psb_debug_outer_)&
& write(debug_unit,*) me,' ',trim(name),': Done alltoallv'
nzbase = nzl
if (present(desc_rx)) then
!
! Extend the appropriate descriptor; started as R but on
! transpose it now describes C
!
call desc_r%clone(desc_rx,info)
call psb_cd_reinit(desc_rx,info)
!
! Take out non-local rows
!
call psb_glob_to_loc(acoo%ia(nzl+1:nzl+iszr),p_desc_c,info,iact='I',owned=.true.)
call psb_coo_clean_negidx_inner(iszr,acoo%ia(nzl+1:nzl+iszr),acoo%ja(nzl+1:nzl+iszr),&
& acoo%val(nzl+1:nzl+iszr),nzt,info)
call desc_rx%g2lip_ins(acoo%ja(nzl+1:nzl+nzt),info)
call psb_cdasb(desc_rx,info)
nzl = nzl + nzt
call acoo%set_nzeros(nzl)
nzl = acoo%get_nzeros()
call acoo%set_sorted(.false.)
!
! Insert to extend descriptor
!
call acoo%set_nrows(p_desc_c%get_local_rows())
call acoo%set_ncols(desc_rx%get_local_cols())
!write(0,*) me,' Trans RX ',acoo%get_nrows(),acoo%get_ncols(),acoo%get_nzeros()
else
!
!
! Take out non-local rows
!
call psb_glob_to_loc(acoo%ia(nzl+1:nzl+iszr),p_desc_c,info,iact='I',owned=.true.)
call psb_glob_to_loc(acoo%ja(nzl+1:nzl+iszr),desc_r,info,iact='I')
call psb_coo_clean_negidx_inner(iszr,acoo%ia(nzl+1:nzl+iszr),acoo%ja(nzl+1:nzl+iszr),&
& acoo%val(nzl+1:nzl+iszr),nzt,info)
nzl = nzl + nzt
call acoo%set_nzeros(nzl)
nzl = acoo%get_nzeros()
call acoo%set_sorted(.false.)
call acoo%set_nrows(p_desc_c%get_local_rows())
call acoo%set_ncols(desc_r%get_local_cols())
!write(0,*) me,' Trans R- ',acoo%get_nrows(),acoo%get_ncols(),acoo%get_nzeros()
end if
end if
!!$ write(0,*) me,' Sanity check after rx%g2l :',count(acoo%ja(1:nzl)<0)

123
base/tools/psb_s_glob_transpose.F90
Unescape Escape View File

@ -61,10 +61,10 @@ subroutine psb_ls_coo_glob_transpose(ain,desc_r,info,atrans,desc_c,desc_rx)
! ...local scalars....
integer(psb_ipk_) :: ictxt, np,me
integer(psb_ipk_) :: counter,proc, j, err_act, inzl
integer(psb_lpk_) :: i, k,idx, r, ipx,mat_recv, iszs, iszr,idxs,idxr,nz,&
integer(psb_ipk_) :: counter,proc, err_act, j
integer(psb_lpk_) :: i, k, idx, r, ipx,mat_recv, iszs, iszr,idxs,idxr,nz,&
& irmin,icmin,irmax,icmax,&
& l1, nsnds, nrcvs, nr,nc,nzl,hlstart, nzt
& l1, nsnds, nrcvs, nr,nc,nzl, hlstart, nzt, nzd, nzbase
integer(psb_mpk_) :: icomm, minfo
integer(psb_mpk_), allocatable :: brvindx(:), &
& rvsz(:), bsdindx(:), sdsz(:), tsdx(:), trvx(:)
@ -196,6 +196,7 @@ subroutine psb_ls_coo_glob_transpose(ain,desc_r,info,atrans,desc_c,desc_rx)
end if
nzl = acoo%get_nzeros()
hlstart = p_desc_c%get_local_rows()
if (.false.) then
do k = 1, nzl
j = acoo%ia(k)
!
@ -279,6 +280,7 @@ subroutine psb_ls_coo_glob_transpose(ain,desc_r,info,atrans,desc_c,desc_rx)
call psb_glob_to_loc(acoo%ja(1:nzl),desc_rx,info,iact='I')
call acoo%set_nrows(p_desc_c%get_local_rows())
call acoo%set_ncols(desc_rx%get_local_cols())
write(0,*) me,' Trans RX ',acoo%get_nrows(),acoo%get_ncols(),acoo%get_nzeros()
else
!
!
@ -292,6 +294,121 @@ subroutine psb_ls_coo_glob_transpose(ain,desc_r,info,atrans,desc_c,desc_rx)
call acoo%set_nrows(p_desc_c%get_local_rows())
call acoo%set_ncols(desc_r%get_local_cols())
write(0,*) me,' Trans R- ',acoo%get_nrows(),acoo%get_ncols(),acoo%get_nzeros()
end if
else
nzd = 0
do k = 1, nzl
j = acoo%ia(k)
if (j<=hlstart) then
nzd = nzd + 1
acoo%ia(nzd) = acoo%ia(k)
acoo%ja(nzd) = acoo%ja(k)
acoo%val(nzd) = acoo%val(k)
else
!
! Put halo entries in global numbering
!
call p_desc_c%indxmap%fnd_halo_owner(j,proc,info)
tsdx(proc+1) = tsdx(proc+1) +1
iasnd(tsdx(proc+1)) = acoo%ia(k)
jasnd(tsdx(proc+1)) = acoo%ja(k)
valsnd(tsdx(proc+1)) = acoo%val(k)
call desc_r%indxmap%l2gip(jasnd(tsdx(proc+1)),info)
call p_desc_c%indxmap%l2gip(iasnd(tsdx(proc+1)),info)
end if
end do
call acoo%set_nzeros(nzd)
!!$ write(0,*) me,' Sanity check before send :',count(acoo%ia(1:nzl)<0),count(acoo%ja(1:nzl)<0),&
!!$ & count(iasnd(1:iszs)<0),count(jasnd(1:iszs)<0)
! And exchange data.
nzl = acoo%get_nzeros()
call acoo%reallocate(nzl+iszr)
#if defined(SP_A2AV_MPI)
call mpi_alltoallv(valsnd,sdsz,bsdindx,psb_mpi_r_dpk_,&
& acoo%val(nzl+1:nzl+iszr),rvsz,brvindx,psb_mpi_r_dpk_,icomm,minfo)
if (minfo == mpi_success) &
& call mpi_alltoallv(iasnd,sdsz,bsdindx,psb_mpi_lpk_,&
& acoo%ia(nzl+1:nzl+iszr),rvsz,brvindx,psb_mpi_lpk_,icomm,minfo)
if (minfo == mpi_success) &
& call mpi_alltoallv(jasnd,sdsz,bsdindx,psb_mpi_lpk_,&
& acoo%ja(nzl+1:nzl+iszr),rvsz,brvindx,psb_mpi_lpk_,icomm,minfo)
if (minfo /= mpi_success) info = minfo
#elif defined(SP_A2AV_XI)
call psb_simple_a2av(valsnd,sdsz,bsdindx,&
& acoo%val(nzl+1:nzl+iszr),rvsz,brvindx,ictxt,info)
if (info == psb_success_) call psb_simple_a2av(iasnd,sdsz,bsdindx,&
& acoo%ia(nzl+1:nzl+iszr),rvsz,brvindx,ictxt,info)
if (info == psb_success_) call psb_simple_a2av(jasnd,sdsz,bsdindx,&
& acoo%ja(nzl+1:nzl+iszr),rvsz,brvindx,ictxt,info)
#elif defined(SP_A2AV_MAT)
call psb_simple_triad_a2av(valsnd,iasnd,jasnd,sdsz,bsdindx,&
& acoo%val(nzl+1:nzl+iszr),acoo%ia(nzl+1:nzl+iszr),&
& acoo%ja(nzl+1:nzl+iszr),rvsz,brvindx,ictxt,info)
!!$ call d_coo_my_a2av(valsnd,iasnd,jasnd,sdsz,bsdindx,&
!!$ & acoo%val(nzl+1:nzl+iszr),acoo%ia(nzl+1:nzl+iszr),&
!!$ & acoo%ja(nzl+1:nzl+iszr),rvsz,brvindx,ictxt,icomm,info)
#else
choke on me @!
#endif
if (info /= psb_success_) then
info=psb_err_from_subroutine_
call psb_errpush(info,name,a_err='mpi_alltoallv')
goto 9999
end if
if (debug_level >= psb_debug_outer_)&
& write(debug_unit,*) me,' ',trim(name),': Done alltoallv'
nzbase = nzl
if (present(desc_rx)) then
!
! Extend the appropriate descriptor; started as R but on
! transpose it now describes C
!
call desc_r%clone(desc_rx,info)
call psb_cd_reinit(desc_rx,info)
!
! Take out non-local rows
!
call psb_glob_to_loc(acoo%ia(nzl+1:nzl+iszr),p_desc_c,info,iact='I',owned=.true.)
call psb_coo_clean_negidx_inner(iszr,acoo%ia(nzl+1:nzl+iszr),acoo%ja(nzl+1:nzl+iszr),&
& acoo%val(nzl+1:nzl+iszr),nzt,info)
call desc_rx%g2lip_ins(acoo%ja(nzl+1:nzl+nzt),info)
call psb_cdasb(desc_rx,info)
nzl = nzl + nzt
call acoo%set_nzeros(nzl)
nzl = acoo%get_nzeros()
call acoo%set_sorted(.false.)
!
! Insert to extend descriptor
!
call acoo%set_nrows(p_desc_c%get_local_rows())
call acoo%set_ncols(desc_rx%get_local_cols())
!write(0,*) me,' Trans RX ',acoo%get_nrows(),acoo%get_ncols(),acoo%get_nzeros()
else
!
!
! Take out non-local rows
!
call psb_glob_to_loc(acoo%ia(nzl+1:nzl+iszr),p_desc_c,info,iact='I',owned=.true.)
call psb_glob_to_loc(acoo%ja(nzl+1:nzl+iszr),desc_r,info,iact='I')
call psb_coo_clean_negidx_inner(iszr,acoo%ia(nzl+1:nzl+iszr),acoo%ja(nzl+1:nzl+iszr),&
& acoo%val(nzl+1:nzl+iszr),nzt,info)
nzl = nzl + nzt
call acoo%set_nzeros(nzl)
nzl = acoo%get_nzeros()
call acoo%set_sorted(.false.)
call acoo%set_nrows(p_desc_c%get_local_rows())
call acoo%set_ncols(desc_r%get_local_cols())
!write(0,*) me,' Trans R- ',acoo%get_nrows(),acoo%get_ncols(),acoo%get_nzeros()
end if
end if
!!$ write(0,*) me,' Sanity check after rx%g2l :',count(acoo%ja(1:nzl)<0)

123
base/tools/psb_z_glob_transpose.F90
Unescape Escape View File

@ -61,10 +61,10 @@ subroutine psb_lz_coo_glob_transpose(ain,desc_r,info,atrans,desc_c,desc_rx)
! ...local scalars....
integer(psb_ipk_) :: ictxt, np,me
integer(psb_ipk_) :: counter,proc, j, err_act, inzl
integer(psb_lpk_) :: i, k,idx, r, ipx,mat_recv, iszs, iszr,idxs,idxr,nz,&
integer(psb_ipk_) :: counter,proc, err_act, j
integer(psb_lpk_) :: i, k, idx, r, ipx,mat_recv, iszs, iszr,idxs,idxr,nz,&
& irmin,icmin,irmax,icmax,&
& l1, nsnds, nrcvs, nr,nc,nzl,hlstart, nzt
& l1, nsnds, nrcvs, nr,nc,nzl, hlstart, nzt, nzd, nzbase
integer(psb_mpk_) :: icomm, minfo
integer(psb_mpk_), allocatable :: brvindx(:), &
& rvsz(:), bsdindx(:), sdsz(:), tsdx(:), trvx(:)
@ -196,6 +196,7 @@ subroutine psb_lz_coo_glob_transpose(ain,desc_r,info,atrans,desc_c,desc_rx)
end if
nzl = acoo%get_nzeros()
hlstart = p_desc_c%get_local_rows()
if (.false.) then
do k = 1, nzl
j = acoo%ia(k)
!
@ -279,6 +280,7 @@ subroutine psb_lz_coo_glob_transpose(ain,desc_r,info,atrans,desc_c,desc_rx)
call psb_glob_to_loc(acoo%ja(1:nzl),desc_rx,info,iact='I')
call acoo%set_nrows(p_desc_c%get_local_rows())
call acoo%set_ncols(desc_rx%get_local_cols())
write(0,*) me,' Trans RX ',acoo%get_nrows(),acoo%get_ncols(),acoo%get_nzeros()
else
!
!
@ -292,6 +294,121 @@ subroutine psb_lz_coo_glob_transpose(ain,desc_r,info,atrans,desc_c,desc_rx)
call acoo%set_nrows(p_desc_c%get_local_rows())
call acoo%set_ncols(desc_r%get_local_cols())
write(0,*) me,' Trans R- ',acoo%get_nrows(),acoo%get_ncols(),acoo%get_nzeros()
end if
else
nzd = 0
do k = 1, nzl
j = acoo%ia(k)
if (j<=hlstart) then
nzd = nzd + 1
acoo%ia(nzd) = acoo%ia(k)
acoo%ja(nzd) = acoo%ja(k)
acoo%val(nzd) = acoo%val(k)
else
!
! Put halo entries in global numbering
!
call p_desc_c%indxmap%fnd_halo_owner(j,proc,info)
tsdx(proc+1) = tsdx(proc+1) +1
iasnd(tsdx(proc+1)) = acoo%ia(k)
jasnd(tsdx(proc+1)) = acoo%ja(k)
valsnd(tsdx(proc+1)) = acoo%val(k)
call desc_r%indxmap%l2gip(jasnd(tsdx(proc+1)),info)
call p_desc_c%indxmap%l2gip(iasnd(tsdx(proc+1)),info)
end if
end do
call acoo%set_nzeros(nzd)
!!$ write(0,*) me,' Sanity check before send :',count(acoo%ia(1:nzl)<0),count(acoo%ja(1:nzl)<0),&
!!$ & count(iasnd(1:iszs)<0),count(jasnd(1:iszs)<0)
! And exchange data.
nzl = acoo%get_nzeros()
call acoo%reallocate(nzl+iszr)
#if defined(SP_A2AV_MPI)
call mpi_alltoallv(valsnd,sdsz,bsdindx,psb_mpi_r_dpk_,&
& acoo%val(nzl+1:nzl+iszr),rvsz,brvindx,psb_mpi_r_dpk_,icomm,minfo)
if (minfo == mpi_success) &
& call mpi_alltoallv(iasnd,sdsz,bsdindx,psb_mpi_lpk_,&
& acoo%ia(nzl+1:nzl+iszr),rvsz,brvindx,psb_mpi_lpk_,icomm,minfo)
if (minfo == mpi_success) &
& call mpi_alltoallv(jasnd,sdsz,bsdindx,psb_mpi_lpk_,&
& acoo%ja(nzl+1:nzl+iszr),rvsz,brvindx,psb_mpi_lpk_,icomm,minfo)
if (minfo /= mpi_success) info = minfo
#elif defined(SP_A2AV_XI)
call psb_simple_a2av(valsnd,sdsz,bsdindx,&
& acoo%val(nzl+1:nzl+iszr),rvsz,brvindx,ictxt,info)
if (info == psb_success_) call psb_simple_a2av(iasnd,sdsz,bsdindx,&
& acoo%ia(nzl+1:nzl+iszr),rvsz,brvindx,ictxt,info)
if (info == psb_success_) call psb_simple_a2av(jasnd,sdsz,bsdindx,&
& acoo%ja(nzl+1:nzl+iszr),rvsz,brvindx,ictxt,info)
#elif defined(SP_A2AV_MAT)
call psb_simple_triad_a2av(valsnd,iasnd,jasnd,sdsz,bsdindx,&
& acoo%val(nzl+1:nzl+iszr),acoo%ia(nzl+1:nzl+iszr),&
& acoo%ja(nzl+1:nzl+iszr),rvsz,brvindx,ictxt,info)
!!$ call d_coo_my_a2av(valsnd,iasnd,jasnd,sdsz,bsdindx,&
!!$ & acoo%val(nzl+1:nzl+iszr),acoo%ia(nzl+1:nzl+iszr),&
!!$ & acoo%ja(nzl+1:nzl+iszr),rvsz,brvindx,ictxt,icomm,info)
#else
choke on me @!
#endif
if (info /= psb_success_) then
info=psb_err_from_subroutine_
call psb_errpush(info,name,a_err='mpi_alltoallv')
goto 9999
end if
if (debug_level >= psb_debug_outer_)&
& write(debug_unit,*) me,' ',trim(name),': Done alltoallv'
nzbase = nzl
if (present(desc_rx)) then
!
! Extend the appropriate descriptor; started as R but on
! transpose it now describes C
!
call desc_r%clone(desc_rx,info)
call psb_cd_reinit(desc_rx,info)
!
! Take out non-local rows
!
call psb_glob_to_loc(acoo%ia(nzl+1:nzl+iszr),p_desc_c,info,iact='I',owned=.true.)
call psb_coo_clean_negidx_inner(iszr,acoo%ia(nzl+1:nzl+iszr),acoo%ja(nzl+1:nzl+iszr),&
& acoo%val(nzl+1:nzl+iszr),nzt,info)
call desc_rx%g2lip_ins(acoo%ja(nzl+1:nzl+nzt),info)
call psb_cdasb(desc_rx,info)
nzl = nzl + nzt
call acoo%set_nzeros(nzl)
nzl = acoo%get_nzeros()
call acoo%set_sorted(.false.)
!
! Insert to extend descriptor
!
call acoo%set_nrows(p_desc_c%get_local_rows())
call acoo%set_ncols(desc_rx%get_local_cols())
!write(0,*) me,' Trans RX ',acoo%get_nrows(),acoo%get_ncols(),acoo%get_nzeros()
else
!
!
! Take out non-local rows
!
call psb_glob_to_loc(acoo%ia(nzl+1:nzl+iszr),p_desc_c,info,iact='I',owned=.true.)
call psb_glob_to_loc(acoo%ja(nzl+1:nzl+iszr),desc_r,info,iact='I')
call psb_coo_clean_negidx_inner(iszr,acoo%ia(nzl+1:nzl+iszr),acoo%ja(nzl+1:nzl+iszr),&
& acoo%val(nzl+1:nzl+iszr),nzt,info)
nzl = nzl + nzt
call acoo%set_nzeros(nzl)
nzl = acoo%get_nzeros()
call acoo%set_sorted(.false.)
call acoo%set_nrows(p_desc_c%get_local_rows())
call acoo%set_ncols(desc_r%get_local_cols())
!write(0,*) me,' Trans R- ',acoo%get_nrows(),acoo%get_ncols(),acoo%get_nzeros()
end if
end if
!!$ write(0,*) me,' Sanity check after rx%g2l :',count(acoo%ja(1:nzl)<0)

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