Compare commits
No commits in common. '1911fec97b96f75d19ec6807c7f238d179a2d7ee' and '9f2b8a2623a5b7c5e3cbfdac29d45cdf8fd3e7c7' have entirely different histories.
1911fec97b
...
9f2b8a2623
Binary file not shown.
|
Before Width: | Height: | Size: 328 B After Width: | Height: | Size: 334 B |
Binary file not shown.
|
Before Width: | Height: | Size: 366 B After Width: | Height: | Size: 382 B |
Binary file not shown.
|
Before Width: | Height: | Size: 289 B After Width: | Height: | Size: 296 B |
Binary file not shown.
|
Before Width: | Height: | Size: 50 KiB |
Binary file not shown.
|
Before Width: | Height: | Size: 52 KiB |
Binary file not shown.
|
Before Width: | Height: | Size: 58 KiB |
Binary file not shown.
|
Before Width: | Height: | Size: 61 KiB |
Binary file not shown.
|
Before Width: | Height: | Size: 90 KiB |
Binary file not shown.
|
Before Width: | Height: | Size: 29 KiB |
Binary file not shown.
|
Before Width: | Height: | Size: 1.5 KiB After Width: | Height: | Size: 1.6 KiB |
Binary file not shown.
|
Before Width: | Height: | Size: 1.8 KiB After Width: | Height: | Size: 2.1 KiB |
Binary file not shown.
|
Before Width: | Height: | Size: 1.1 KiB After Width: | Height: | Size: 1.3 KiB |
Binary file not shown.
|
Before Width: | Height: | Size: 1.7 KiB After Width: | Height: | Size: 2.0 KiB |
Binary file not shown.
|
Before Width: | Height: | Size: 1.2 KiB After Width: | Height: | Size: 1.3 KiB |
Binary file not shown.
|
Before Width: | Height: | Size: 1.2 KiB After Width: | Height: | Size: 1.3 KiB |
Binary file not shown.
|
Before Width: | Height: | Size: 1.3 KiB After Width: | Height: | Size: 1.6 KiB |
@ -1,19 +0,0 @@
|
||||
<!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN"
|
||||
"http://www.w3.org/TR/html4/loose.dtd">
|
||||
<html >
|
||||
<head><title></title>
|
||||
<meta http-equiv="Content-Type" content="text/html; charset=iso-8859-1">
|
||||
<meta name="generator" content="TeX4ht (https://tug.org/tex4ht/)">
|
||||
<meta name="originator" content="TeX4ht (https://tug.org/tex4ht/)">
|
||||
<!-- html,3 -->
|
||||
<meta name="src" content="userhtml.tex">
|
||||
<link rel="stylesheet" type="text/css" href="userhtml.css">
|
||||
</head><body
|
||||
>
|
||||
<div class="footnote-text">
|
||||
<!--l. 72--><p class="indent" > <span class="footnote-mark"><a
|
||||
id="fn4x0"><a
|
||||
id="x16-136002x10.1"></a> <sup class="textsuperscript">4</sup></a></span><span
|
||||
class="cmr-8">The string is case-insensitive</span></div>
|
||||
|
||||
</body></html>
|
||||
Binary file not shown.
|
Before Width: | Height: | Size: 968 B After Width: | Height: | Size: 1.1 KiB |
Binary file not shown.
|
Before Width: | Height: | Size: 1.1 KiB After Width: | Height: | Size: 1.2 KiB |
@ -1,20 +0,0 @@
|
||||
<!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN"
|
||||
"http://www.w3.org/TR/html4/loose.dtd">
|
||||
<html >
|
||||
<head><title></title>
|
||||
<meta http-equiv="Content-Type" content="text/html; charset=iso-8859-1">
|
||||
<meta name="generator" content="TeX4ht (https://tug.org/tex4ht/)">
|
||||
<meta name="originator" content="TeX4ht (https://tug.org/tex4ht/)">
|
||||
<!-- html,3 -->
|
||||
<meta name="src" content="userhtml.tex">
|
||||
<link rel="stylesheet" type="text/css" href="userhtml.css">
|
||||
</head><body
|
||||
>
|
||||
<div class="footnote-text">
|
||||
<!--l. 53--><p class="noindent" ><span class="footnote-mark"><a
|
||||
id="fn5x0"><a
|
||||
id="x18-143004x11.1"></a> <sup class="textsuperscript">5</sup></a></span><span
|
||||
class="cmr-8">Note: the implementation is for </span><span
|
||||
class="cmmi-8">FCG</span><span
|
||||
class="cmr-8">(1).</span></div>
|
||||
</body></html>
|
||||
Binary file not shown.
|
Before Width: | Height: | Size: 1.1 KiB After Width: | Height: | Size: 1.3 KiB |
Binary file not shown.
|
Before Width: | Height: | Size: 1.3 KiB After Width: | Height: | Size: 1.4 KiB |
Binary file not shown.
|
Before Width: | Height: | Size: 1.0 KiB After Width: | Height: | Size: 1.1 KiB |
Binary file not shown.
|
Before Width: | Height: | Size: 1.3 KiB After Width: | Height: | Size: 1.4 KiB |
Binary file not shown.
|
Before Width: | Height: | Size: 7.5 KiB After Width: | Height: | Size: 10 KiB |
Binary file not shown.
|
Before Width: | Height: | Size: 1.3 KiB After Width: | Height: | Size: 1.4 KiB |
Binary file not shown.
|
Before Width: | Height: | Size: 1.0 KiB After Width: | Height: | Size: 1.2 KiB |
Binary file not shown.
|
Before Width: | Height: | Size: 970 B After Width: | Height: | Size: 1.0 KiB |
Binary file not shown.
|
Before Width: | Height: | Size: 420 B After Width: | Height: | Size: 439 B |
Binary file not shown.
|
Before Width: | Height: | Size: 710 B After Width: | Height: | Size: 763 B |
Binary file not shown.
|
Before Width: | Height: | Size: 1.7 KiB After Width: | Height: | Size: 1.9 KiB |
Binary file not shown.
|
Before Width: | Height: | Size: 1.8 KiB After Width: | Height: | Size: 2.0 KiB |
Binary file not shown.
|
Before Width: | Height: | Size: 2.0 KiB After Width: | Height: | Size: 2.4 KiB |
Binary file not shown.
|
Before Width: | Height: | Size: 1016 B After Width: | Height: | Size: 1.1 KiB |
Binary file not shown.
|
Before Width: | Height: | Size: 2.1 KiB After Width: | Height: | Size: 2.6 KiB |
Binary file not shown.
|
Before Width: | Height: | Size: 1.5 KiB After Width: | Height: | Size: 1.7 KiB |
Binary file not shown.
|
Before Width: | Height: | Size: 1.5 KiB After Width: | Height: | Size: 1.8 KiB |
Binary file not shown.
|
Before Width: | Height: | Size: 1.0 KiB After Width: | Height: | Size: 1.1 KiB |
Binary file not shown.
|
Before Width: | Height: | Size: 1.6 KiB After Width: | Height: | Size: 1.8 KiB |
Binary file not shown.
|
Before Width: | Height: | Size: 1.3 KiB After Width: | Height: | Size: 1.5 KiB |
@ -1,24 +0,0 @@
|
||||
<!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN"
|
||||
"http://www.w3.org/TR/html4/loose.dtd">
|
||||
<html >
|
||||
<head><title></title>
|
||||
<meta http-equiv="Content-Type" content="text/html; charset=iso-8859-1">
|
||||
<meta name="generator" content="TeX4ht (https://tug.org/tex4ht/)">
|
||||
<meta name="originator" content="TeX4ht (https://tug.org/tex4ht/)">
|
||||
<!-- html,3 -->
|
||||
<meta name="src" content="userhtml.tex">
|
||||
<link rel="stylesheet" type="text/css" href="userhtml.css">
|
||||
</head><body
|
||||
>
|
||||
<div class="footnote-text">
|
||||
<!--l. 195--><p class="noindent" ><span class="footnote-mark"><a
|
||||
id="fn2x0"><a
|
||||
id="x6-4002x2.1"></a> <sup class="textsuperscript">2</sup></a></span><span
|
||||
class="cmr-8">This is the normal situation when the pattern of the sparse matrix is symmetric, which is</span>
|
||||
<span
|
||||
class="cmr-8">equivalent to say that the interaction between two variables is reciprocal. If the matrix pattern is</span>
|
||||
<span
|
||||
class="cmr-8">non-symmetric we may have one-way interactions, and these could cause a situation in which a</span>
|
||||
<span
|
||||
class="cmr-8">boundary point is not a halo point for its neighbour.</span></div>
|
||||
</body></html>
|
||||
Binary file not shown.
|
Before Width: | Height: | Size: 2.1 KiB After Width: | Height: | Size: 2.5 KiB |
Binary file not shown.
|
Before Width: | Height: | Size: 1.8 KiB After Width: | Height: | Size: 2.1 KiB |
Binary file not shown.
|
Before Width: | Height: | Size: 1.0 KiB After Width: | Height: | Size: 1.2 KiB |
Binary file not shown.
|
Before Width: | Height: | Size: 1.7 KiB After Width: | Height: | Size: 2.0 KiB |
@ -1,921 +0,0 @@
|
||||
<!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN"
|
||||
"http://www.w3.org/TR/html4/loose.dtd">
|
||||
<html >
|
||||
<head><title>Extensions</title>
|
||||
<meta http-equiv="Content-Type" content="text/html; charset=iso-8859-1">
|
||||
<meta name="generator" content="TeX4ht (https://tug.org/tex4ht/)">
|
||||
<meta name="originator" content="TeX4ht (https://tug.org/tex4ht/)">
|
||||
<!-- html,3 -->
|
||||
<meta name="src" content="userhtml.tex">
|
||||
<link rel="stylesheet" type="text/css" href="userhtml.css">
|
||||
</head><body
|
||||
>
|
||||
<!--l. 1--><div class="crosslinks"><p class="noindent">[<a
|
||||
href="userhtmlse11.html" >prev</a>] [<a
|
||||
href="userhtmlse11.html#tailuserhtmlse11.html" >prev-tail</a>] [<a
|
||||
href="userhtmlse9.html#tailuserhtmlse12.html">tail</a>] [<a
|
||||
href="userhtml.html# " >up</a>] </p></div>
|
||||
<h3 class="sectionHead"><span class="titlemark">12 </span> <a
|
||||
id="x19-14400012"></a>Extensions</h3>
|
||||
<!--l. 3--><p class="noindent" >The EXT, CUDA and RSB subdirectories contains a set of extensions to the base
|
||||
library. The extensions provide additional storage formats beyond the ones already
|
||||
contained in the base library, as well as interfaces to:
|
||||
<dl class="description"><dt class="description">
|
||||
<!--l. 8--><p class="noindent" >
|
||||
<span
|
||||
class="cmbx-10">SPGPU</span> </dt><dd
|
||||
class="description">
|
||||
<!--l. 8--><p class="noindent" >a CUDA library originally
|
||||
published as <a
|
||||
href="https://code.google.com/p/spgpu/" class="url" ><span
|
||||
class="cmtt-10">https://code.google.com/p/spgpu/</span></a> and now included
|
||||
in the <span class="obeylines-h"><span class="verb"><span
|
||||
class="cmtt-10">cuda</span></span></span> subdir, for computations on NVIDIA GPUs;
|
||||
</dd><dt class="description">
|
||||
<!--l. 11--><p class="noindent" >
|
||||
<span
|
||||
class="cmbx-10">LIBRSB</span> </dt><dd
|
||||
class="description">
|
||||
<!--l. 11--><p class="noindent" ><a
|
||||
href="http://sourceforge.net/projects/librsb/" class="url" ><span
|
||||
class="cmtt-10">http://sourceforge.net/projects/librsb/</span></a>, for computations on
|
||||
multicore parallel machines.</dd></dl>
|
||||
<!--l. 14--><p class="noindent" >The infrastructure laid out in the base library to allow for these extensions is detailed in
|
||||
the references <span class="cite">[<a
|
||||
href="userhtmlli2.html#XDesPat:11">20</a>, <a
|
||||
href="userhtmlli2.html#XCaFiRo:2014">21</a>, <a
|
||||
href="userhtmlli2.html#XSparse03">10</a>]</span>; the CUDA-specific data formats are described
|
||||
in <span class="cite">[<a
|
||||
href="userhtmlli2.html#XOurTechRep">22</a>]</span>.
|
||||
<!--l. 19--><p class="noindent" >
|
||||
<h4 class="subsectionHead"><span class="titlemark">12.1 </span> <a
|
||||
id="x19-14500012.1"></a>Using the extensions</h4>
|
||||
<!--l. 21--><p class="noindent" >A sample application using the PSBLAS extensions will contain the following
|
||||
steps:
|
||||
<ul class="itemize1">
|
||||
<li class="itemize">
|
||||
<!--l. 24--><p class="noindent" ><span class="obeylines-h"><span class="verb"><span
|
||||
class="cmtt-10">USE</span></span></span> the appropriat modules (<span class="obeylines-h"><span class="verb"><span
|
||||
class="cmtt-10">psb_ext_mod</span></span></span>, <span class="obeylines-h"><span class="verb"><span
|
||||
class="cmtt-10">psb_cuda_mod</span></span></span>);
|
||||
</li>
|
||||
<li class="itemize">
|
||||
<!--l. 26--><p class="noindent" >Declare a <span
|
||||
class="cmti-10">mold </span>variable of the necessary type (e.g.
|
||||
<span class="obeylines-h"><span class="verb"><span
|
||||
class="cmtt-10">psb_d_ell_sparse_mat</span></span></span>, <span class="obeylines-h"><span class="verb"><span
|
||||
class="cmtt-10">psb_d_hlg_sparse_mat</span></span></span>, <span class="obeylines-h"><span class="verb"><span
|
||||
class="cmtt-10">psb_d_vect_cuda</span></span></span>);
|
||||
</li>
|
||||
<li class="itemize">
|
||||
<!--l. 29--><p class="noindent" >Pass the mold variable to the base library interface where needed to ensure
|
||||
the appropriate dynamic type.</li></ul>
|
||||
|
||||
|
||||
|
||||
<!--l. 32--><p class="noindent" >Suppose you want to use the CUDA-enabled ELLPACK data structure; you would use a
|
||||
piece of code like this (and don’t forget, you need CUDA-side vectors along with the
|
||||
matrices):
|
||||
<div class="center"
|
||||
>
|
||||
<!--l. 85--><p class="noindent" >
|
||||
|
||||
|
||||
|
||||
<div class="minipage"><pre class="verbatim" id="verbatim-103">
|
||||
program my_cuda_test
|
||||
  use psb_base_mod
|
||||
  use psb_util_mod
|
||||
  use psb_ext_mod
|
||||
  use psb_cuda_mod
|
||||
  type(psb_dspmat_type) :: a, agpu
|
||||
  type(psb_d_vect_type) :: x, xg, bg
|
||||
|
||||
  real(psb_dpk_), allocatable :: xtmp(:)
|
||||
  type(psb_d_vect_cuda)       :: vmold
|
||||
  type(psb_d_elg_sparse_mat) :: aelg
|
||||
  type(psb_ctxt_type) :: ctxt
|
||||
  integer             :: iam, np
|
||||
|
||||
|
||||
  call psb_init(ctxt)
|
||||
  call psb_info(ctxt,iam,np)
|
||||
  call psb_cuda_init(ctxt, iam)
|
||||
|
||||
|
||||
  ! My own home-grown matrix generator
|
||||
  call gen_matrix(ctxt,idim,desc_a,a,x,info)
|
||||
  if (info /= 0) goto 9999
|
||||
|
||||
  call a%cscnv(agpu,info,mold=aelg)
|
||||
  if (info /= 0) goto 9999
|
||||
  xtmp = x%get_vect()
|
||||
  call xg%bld(xtmp,mold=vmold)
|
||||
  call bg%bld(size(xtmp),mold=vmold)
|
||||
|
||||
  ! Do sparse MV
|
||||
  call psb_spmm(done,agpu,xg,dzero,bg,desc_a,info)
|
||||
|
||||
|
||||
9999 continue
|
||||
  if (info == 0) then
|
||||
     write(*,*) ’42’
|
||||
  else
|
||||
     write(*,*) ’Something went wrong ’,info
|
||||
  end if
|
||||
|
||||
|
||||
  call psb_cuda_exit()
|
||||
  call psb_exit(ctxt)
|
||||
  stop
|
||||
end program my_cuda_test
|
||||
</pre>
|
||||
<!--l. 134--><p class="nopar" > </div></div>
|
||||
|
||||
|
||||
|
||||
<!--l. 139--><p class="indent" > A full example of this strategy can be seen in the <span
|
||||
class="cmtt-10">test/ext/kernel </span>and
|
||||
<span
|
||||
class="cmtt-10">test/cuda/kernel </span>subdirectories, where we provide sample programs to test the
|
||||
speed of the sparse matrix-vector product with the various data structures included
|
||||
in the library.
|
||||
<!--l. 146--><p class="noindent" >
|
||||
<h4 class="subsectionHead"><span class="titlemark">12.2 </span> <a
|
||||
id="x19-14600012.2"></a>Extensions’ Data Structures</h4>
|
||||
<!--l. 150--><p class="noindent" >Access to the facilities provided by the EXT library is mainly achieved through
|
||||
the data types that are provided within. The data classes are derived from
|
||||
the base classes in PSBLAS, through the Fortran 2003 mechanism of <span
|
||||
class="cmti-10">type</span>
|
||||
<span
|
||||
class="cmti-10">extension</span> <span class="cite">[<a
|
||||
href="userhtmlli2.html#XMRC:11">17</a>]</span>.
|
||||
<!--l. 155--><p class="indent" > The data classes are divided between the general purpose CPU extensions, the
|
||||
GPU interfaces and the RSB interfaces. In the description we will make use of the
|
||||
notation introduced in Table <a
|
||||
href="#x19-146001r21">21<!--tex4ht:ref: tab:notation --></a>.
|
||||
<div class="table">
|
||||
|
||||
|
||||
|
||||
<!--l. 160--><p class="indent" > <a
|
||||
id="x19-146001r21"></a><hr class="float"><div class="float"
|
||||
>
|
||||
|
||||
|
||||
|
||||
<div class="caption"
|
||||
><span class="id">Table 21: </span><span
|
||||
class="content">Notation for parameters describing a sparse matrix</span></div><!--tex4ht:label?: x19-146001r21 -->
|
||||
<div class="center"
|
||||
>
|
||||
<!--l. 162--><p class="noindent" >
|
||||
<div class="tabular"> <table id="TBL-23" class="tabular"
|
||||
|
||||
><colgroup id="TBL-23-1g"><col
|
||||
id="TBL-23-1"><col
|
||||
id="TBL-23-2"></colgroup><tr
|
||||
class="hline"><td><hr></td><td><hr></td></tr><tr
|
||||
style="vertical-align:baseline;" id="TBL-23-1-"><td style="white-space:nowrap; text-align:left;" id="TBL-23-1-1"
|
||||
class="td11"><span
|
||||
class="cmr-8">Name </span></td><td style="white-space:nowrap; text-align:left;" id="TBL-23-1-2"
|
||||
class="td11"><span
|
||||
class="cmr-8">Description </span></td>
|
||||
</tr><tr
|
||||
class="hline"><td><hr></td><td><hr></td></tr><tr
|
||||
style="vertical-align:baseline;" id="TBL-23-2-"><td style="white-space:nowrap; text-align:left;" id="TBL-23-2-1"
|
||||
class="td11"><span
|
||||
class="cmr-8">M </span></td><td style="white-space:nowrap; text-align:left;" id="TBL-23-2-2"
|
||||
class="td11"><span
|
||||
class="cmr-8">Number of rows in matrix </span></td></tr><tr
|
||||
style="vertical-align:baseline;" id="TBL-23-3-"><td style="white-space:nowrap; text-align:left;" id="TBL-23-3-1"
|
||||
class="td11"><span
|
||||
class="cmr-8">N </span></td><td style="white-space:nowrap; text-align:left;" id="TBL-23-3-2"
|
||||
class="td11"><span
|
||||
class="cmr-8">Number of columns in matrix</span></td>
|
||||
</tr><tr
|
||||
style="vertical-align:baseline;" id="TBL-23-4-"><td style="white-space:nowrap; text-align:left;" id="TBL-23-4-1"
|
||||
class="td11"><span
|
||||
class="cmr-8">NZ </span></td><td style="white-space:nowrap; text-align:left;" id="TBL-23-4-2"
|
||||
class="td11"><span
|
||||
class="cmr-8">Number of nonzeros in matrix </span></td></tr><tr
|
||||
style="vertical-align:baseline;" id="TBL-23-5-"><td style="white-space:nowrap; text-align:left;" id="TBL-23-5-1"
|
||||
class="td11"><span
|
||||
class="cmr-8">AVGNZR </span></td><td style="white-space:nowrap; text-align:left;" id="TBL-23-5-2"
|
||||
class="td11"><span
|
||||
class="cmr-8">Average number of nonzeros per row</span></td>
|
||||
</tr><tr
|
||||
style="vertical-align:baseline;" id="TBL-23-6-"><td style="white-space:nowrap; text-align:left;" id="TBL-23-6-1"
|
||||
class="td11"><span
|
||||
class="cmr-8">MAXNZR</span></td><td style="white-space:nowrap; text-align:left;" id="TBL-23-6-2"
|
||||
class="td11"><span
|
||||
class="cmr-8">Maximum number of nonzeros per row</span></td>
|
||||
</tr><tr
|
||||
style="vertical-align:baseline;" id="TBL-23-7-"><td style="white-space:nowrap; text-align:left;" id="TBL-23-7-1"
|
||||
class="td11"><span
|
||||
class="cmr-8">NDIAG </span></td><td style="white-space:nowrap; text-align:left;" id="TBL-23-7-2"
|
||||
class="td11"><span
|
||||
class="cmr-8">Numero of nonzero diagonals </span></td>
|
||||
</tr><tr
|
||||
style="vertical-align:baseline;" id="TBL-23-8-"><td style="white-space:nowrap; text-align:left;" id="TBL-23-8-1"
|
||||
class="td11"><span
|
||||
class="cmr-8">AS </span></td><td style="white-space:nowrap; text-align:left;" id="TBL-23-8-2"
|
||||
class="td11"><span
|
||||
class="cmr-8">Coefficients array </span></td>
|
||||
</tr><tr
|
||||
style="vertical-align:baseline;" id="TBL-23-9-"><td style="white-space:nowrap; text-align:left;" id="TBL-23-9-1"
|
||||
class="td11"><span
|
||||
class="cmr-8">IA </span></td><td style="white-space:nowrap; text-align:left;" id="TBL-23-9-2"
|
||||
class="td11"><span
|
||||
class="cmr-8">Row indices array </span></td>
|
||||
</tr><tr
|
||||
style="vertical-align:baseline;" id="TBL-23-10-"><td style="white-space:nowrap; text-align:left;" id="TBL-23-10-1"
|
||||
class="td11"><span
|
||||
class="cmr-8">JA </span></td><td style="white-space:nowrap; text-align:left;" id="TBL-23-10-2"
|
||||
class="td11"><span
|
||||
class="cmr-8">Column indices array </span></td>
|
||||
</tr><tr
|
||||
style="vertical-align:baseline;" id="TBL-23-11-"><td style="white-space:nowrap; text-align:left;" id="TBL-23-11-1"
|
||||
class="td11"><span
|
||||
class="cmr-8">IRP </span></td><td style="white-space:nowrap; text-align:left;" id="TBL-23-11-2"
|
||||
class="td11"><span
|
||||
class="cmr-8">Row start pointers array </span></td>
|
||||
</tr><tr
|
||||
style="vertical-align:baseline;" id="TBL-23-12-"><td style="white-space:nowrap; text-align:left;" id="TBL-23-12-1"
|
||||
class="td11"><span
|
||||
class="cmr-8">JCP </span></td><td style="white-space:nowrap; text-align:left;" id="TBL-23-12-2"
|
||||
class="td11"><span
|
||||
class="cmr-8">Column start pointers array </span></td>
|
||||
</tr><tr
|
||||
style="vertical-align:baseline;" id="TBL-23-13-"><td style="white-space:nowrap; text-align:left;" id="TBL-23-13-1"
|
||||
class="td11"><span
|
||||
class="cmr-8">NZR </span></td><td style="white-space:nowrap; text-align:left;" id="TBL-23-13-2"
|
||||
class="td11"><span
|
||||
class="cmr-8">Number of nonzeros per row array </span></td>
|
||||
</tr><tr
|
||||
style="vertical-align:baseline;" id="TBL-23-14-"><td style="white-space:nowrap; text-align:left;" id="TBL-23-14-1"
|
||||
class="td11"><span
|
||||
class="cmr-8">OFFSET </span></td><td style="white-space:nowrap; text-align:left;" id="TBL-23-14-2"
|
||||
class="td11"><span
|
||||
class="cmr-8">Offset for diagonals </span></td>
|
||||
</tr><tr
|
||||
class="hline"><td><hr></td><td><hr></td></tr><tr
|
||||
style="vertical-align:baseline;" id="TBL-23-15-"><td style="white-space:nowrap; text-align:left;" id="TBL-23-15-1"
|
||||
class="td11"> </td></tr></table> </div>
|
||||
</div>
|
||||
|
||||
|
||||
|
||||
</div><hr class="endfloat" />
|
||||
</div>
|
||||
<!--l. 188--><p class="indent" > <hr class="figure"><div class="figure"
|
||||
>
|
||||
|
||||
|
||||
|
||||
<a
|
||||
id="x19-146002r5"></a>
|
||||
|
||||
|
||||
|
||||
<!--l. 192--><p class="noindent" ><img
|
||||
src="mat.png" alt="PIC"
|
||||
width="147" height="147" >
|
||||
<br /> <div class="caption"
|
||||
><span class="id">Figure 5: </span><span
|
||||
class="content">Example of sparse matrix</span></div><!--tex4ht:label?: x19-146002r5 -->
|
||||
|
||||
|
||||
|
||||
<!--l. 198--><p class="indent" > </div><hr class="endfigure">
|
||||
<h4 class="subsectionHead"><span class="titlemark">12.3 </span> <a
|
||||
id="x19-14700012.3"></a>CPU-class extensions</h4>
|
||||
<!--l. 203--><p class="noindent" >
|
||||
<h5 class="likesubsubsectionHead"><a
|
||||
id="x19-148000"></a>ELLPACK</h5>
|
||||
<!--l. 205--><p class="noindent" >The ELLPACK/ITPACK format (shown in Figure <a
|
||||
href="#x19-148001r6">6<!--tex4ht:ref: fig:ell --></a>) comprises two 2-dimensional
|
||||
arrays <span class="obeylines-h"><span class="verb"><span
|
||||
class="cmtt-10">AS</span></span></span> and <span class="obeylines-h"><span class="verb"><span
|
||||
class="cmtt-10">JA</span></span></span> with <span class="obeylines-h"><span class="verb"><span
|
||||
class="cmtt-10">M</span></span></span> rows and <span class="obeylines-h"><span class="verb"><span
|
||||
class="cmtt-10">MAXNZR</span></span></span> columns, where <span class="obeylines-h"><span class="verb"><span
|
||||
class="cmtt-10">MAXNZR</span></span></span> is the maximum
|
||||
number of nonzeros in any row <span class="cite">[<span
|
||||
class="cmbx-10">?</span>]</span>. Each row of the arrays <span class="obeylines-h"><span class="verb"><span
|
||||
class="cmtt-10">AS</span></span></span> and <span class="obeylines-h"><span class="verb"><span
|
||||
class="cmtt-10">JA</span></span></span> contains the
|
||||
coefficients and column indices; rows shorter than <span class="obeylines-h"><span class="verb"><span
|
||||
class="cmtt-10">MAXNZR</span></span></span> are padded with zero
|
||||
coefficients and appropriate column indices, e.g. the last valid one found in the same
|
||||
row.
|
||||
<!--l. 215--><p class="indent" > <hr class="figure"><div class="figure"
|
||||
>
|
||||
|
||||
|
||||
|
||||
<a
|
||||
id="x19-148001r6"></a>
|
||||
|
||||
|
||||
|
||||
<!--l. 219--><p class="noindent" ><img
|
||||
src="ell.png" alt="PIC"
|
||||
width="233" height="233" >
|
||||
<br /> <div class="caption"
|
||||
><span class="id">Figure 6: </span><span
|
||||
class="content">ELLPACK compression of matrix in Figure <a
|
||||
href="#x19-146002r5">5<!--tex4ht:ref: fig:dense --></a></span></div><!--tex4ht:label?: x19-148001r6 -->
|
||||
|
||||
|
||||
|
||||
<!--l. 225--><p class="indent" > </div><hr class="endfigure">
|
||||
<a
|
||||
id="x19-148002r1"></a>
|
||||
|
||||
|
||||
|
||||
<!--l. 229--><p class="indent" > <hr class="float"><div class="float"
|
||||
>
|
||||
|
||||
|
||||
|
||||
<!--l. 231-->
|
||||
<pre class="lstlisting" id="listing-168"><span class="label"><a
|
||||
id="x19-148003r1"></a></span><span
|
||||
class="cmtt-9"> </span><span
|
||||
class="cmtt-9"> </span><span
|
||||
class="cmtt-9"> </span><span
|
||||
class="cmtt-9"> </span><span style="color:#000000"><span
|
||||
class="cmtt-9">do</span></span><span style="color:#000000"> </span><span style="color:#000000"><span
|
||||
class="cmtt-9">i</span></span><span style="color:#000000"><span
|
||||
class="cmtt-9">=1,</span></span><span style="color:#000000"><span
|
||||
class="cmtt-9">n</span></span>
|
||||
<span class="label"><a
|
||||
id="x19-148004r2"></a></span><span
|
||||
class="cmtt-9"> </span><span
|
||||
class="cmtt-9"> </span><span
|
||||
class="cmtt-9"> </span><span
|
||||
class="cmtt-9"> </span><span
|
||||
class="cmtt-9"> </span><span
|
||||
class="cmtt-9"> </span><span style="color:#000000"><span
|
||||
class="cmtt-9">t</span></span><span style="color:#000000"><span
|
||||
class="cmtt-9">=0</span></span>
|
||||
<span class="label"><a
|
||||
id="x19-148005r3"></a></span><span
|
||||
class="cmtt-9"> </span><span
|
||||
class="cmtt-9"> </span><span
|
||||
class="cmtt-9"> </span><span
|
||||
class="cmtt-9"> </span><span
|
||||
class="cmtt-9"> </span><span
|
||||
class="cmtt-9"> </span><span style="color:#000000"><span
|
||||
class="cmtt-9">do</span></span><span style="color:#000000"> </span><span style="color:#000000"><span
|
||||
class="cmtt-9">j</span></span><span style="color:#000000"><span
|
||||
class="cmtt-9">=1,</span></span><span style="color:#000000"><span
|
||||
class="cmtt-9">maxnzr</span></span>
|
||||
<span class="label"><a
|
||||
id="x19-148006r4"></a></span><span
|
||||
class="cmtt-9"> </span><span
|
||||
class="cmtt-9"> </span><span
|
||||
class="cmtt-9"> </span><span
|
||||
class="cmtt-9"> </span><span
|
||||
class="cmtt-9"> </span><span
|
||||
class="cmtt-9"> </span><span
|
||||
class="cmtt-9"> </span><span
|
||||
class="cmtt-9"> </span><span style="color:#000000"><span
|
||||
class="cmtt-9">t</span></span><span style="color:#000000"> </span><span style="color:#000000"><span
|
||||
class="cmtt-9">=</span></span><span style="color:#000000"> </span><span style="color:#000000"><span
|
||||
class="cmtt-9">t</span></span><span style="color:#000000"> </span><span style="color:#000000"><span
|
||||
class="cmtt-9">+</span></span><span style="color:#000000"> </span><span
|
||||
class="cmtt-9"> </span><span style="color:#000000"><span
|
||||
class="cmtt-9">as</span></span><span style="color:#000000"><span
|
||||
class="cmtt-9">(</span></span><span style="color:#000000"><span
|
||||
class="cmtt-9">i</span></span><span style="color:#000000"><span
|
||||
class="cmtt-9">,</span></span><span style="color:#000000"><span
|
||||
class="cmtt-9">j</span></span><span style="color:#000000"><span
|
||||
class="cmtt-9">)*</span></span><span style="color:#000000"><span
|
||||
class="cmtt-9">x</span></span><span style="color:#000000"><span
|
||||
class="cmtt-9">(</span></span><span style="color:#000000"><span
|
||||
class="cmtt-9">ja</span></span><span style="color:#000000"><span
|
||||
class="cmtt-9">(</span></span><span style="color:#000000"><span
|
||||
class="cmtt-9">i</span></span><span style="color:#000000"><span
|
||||
class="cmtt-9">,</span></span><span style="color:#000000"><span
|
||||
class="cmtt-9">j</span></span><span style="color:#000000"><span
|
||||
class="cmtt-9">))</span></span>
|
||||
<span class="label"><a
|
||||
id="x19-148007r5"></a></span><span
|
||||
class="cmtt-9"> </span><span
|
||||
class="cmtt-9"> </span><span
|
||||
class="cmtt-9"> </span><span
|
||||
class="cmtt-9"> </span><span
|
||||
class="cmtt-9"> </span><span
|
||||
class="cmtt-9"> </span><span style="color:#000000"><span
|
||||
class="cmtt-9">end</span></span><span style="color:#000000"> </span><span style="color:#000000"><span
|
||||
class="cmtt-9">do</span></span>
|
||||
<span class="label"><a
|
||||
id="x19-148008r6"></a></span><span
|
||||
class="cmtt-9"> </span><span
|
||||
class="cmtt-9"> </span><span
|
||||
class="cmtt-9"> </span><span
|
||||
class="cmtt-9"> </span><span
|
||||
class="cmtt-9"> </span><span
|
||||
class="cmtt-9"> </span><span style="color:#000000"><span
|
||||
class="cmtt-9">y</span></span><span style="color:#000000"><span
|
||||
class="cmtt-9">(</span></span><span style="color:#000000"><span
|
||||
class="cmtt-9">i</span></span><span style="color:#000000"><span
|
||||
class="cmtt-9">)</span></span><span style="color:#000000"> </span><span style="color:#000000"><span
|
||||
class="cmtt-9">=</span></span><span style="color:#000000"> </span><span style="color:#000000"><span
|
||||
class="cmtt-9">t</span></span>
|
||||
<span class="label"><a
|
||||
id="x19-148009r7"></a></span><span
|
||||
class="cmtt-9"> </span><span
|
||||
class="cmtt-9"> </span><span
|
||||
class="cmtt-9"> </span><span
|
||||
class="cmtt-9"> </span><span style="color:#000000"><span
|
||||
class="cmtt-9">end</span></span><span style="color:#000000"> </span><span style="color:#000000"><span
|
||||
class="cmtt-9">do</span></span></pre>
|
||||
|
||||
<a
|
||||
id="x19-148010r1"></a>
|
||||
<a
|
||||
id="x19-148011"></a>
|
||||
<span
|
||||
class="cmbx-10">Algorithm</span><span
|
||||
class="cmbx-10"> 1:</span>  Matrix-Vector product in ELL format
|
||||
|
||||
|
||||
|
||||
</div><hr class="endfloat" />
|
||||
<!--l. 242--><p class="indent" > The matrix-vector product <span
|
||||
class="cmmi-10">y </span>= <span
|
||||
class="cmmi-10">Ax </span>can be computed with the code shown in
|
||||
Alg. <a
|
||||
href="#x19-148010r1">1<!--tex4ht:ref: alg:ell --></a>; it costs one memory write per outer iteration, plus three memory reads and
|
||||
two floating-point operations per inner iteration.
|
||||
<!--l. 247--><p class="indent" > Unless all rows have exactly the same number of nonzeros, some of the coefficients
|
||||
in the <span class="obeylines-h"><span class="verb"><span
|
||||
class="cmtt-10">AS</span></span></span> array will be zeros; therefore this data structure will have an overhead both
|
||||
in terms of memory space and redundant operations (multiplications by zero). The
|
||||
overhead can be acceptable if:
|
||||
<ol class="enumerate1" >
|
||||
<li
|
||||
class="enumerate" id="x19-148013x1">
|
||||
<!--l. 253--><p class="noindent" >The maximum number of nonzeros per row is not much larger than the
|
||||
average;
|
||||
</li>
|
||||
<li
|
||||
class="enumerate" id="x19-148015x2">
|
||||
<!--l. 255--><p class="noindent" >The regularity of the data structure allows for faster code, e.g. by allowing
|
||||
vectorization, thereby offsetting the additional storage requirements.</li></ol>
|
||||
<!--l. 259--><p class="noindent" >In the extreme case where the input matrix has one full row, the ELLPACK
|
||||
structure would require more memory than the normal 2D array storage. The
|
||||
ELLPACK storage format was very popular in the vector computing days; in
|
||||
modern CPUs it is not quite as popular, but it is the basis for many GPU
|
||||
formats.
|
||||
<!--l. 265--><p class="indent" > The relevant data type is <span class="obeylines-h"><span class="verb"><span
|
||||
class="cmtt-10">psb_T_ell_sparse_mat</span></span></span>:
|
||||
<div class="center"
|
||||
>
|
||||
<!--l. 281--><p class="noindent" >
|
||||
<div class="minipage"><pre class="verbatim" id="verbatim-104">
|
||||
  type, extends(psb_d_base_sparse_mat) :: psb_d_ell_sparse_mat
|
||||
    !
|
||||
    ! ITPACK/ELL format, extended.
|
||||
    !
|
||||
|
||||
    integer(psb_ipk_), allocatable :: irn(:), ja(:,:), idiag(:)
|
||||
    real(psb_dpk_), allocatable :: val(:,:)
|
||||
|
||||
  contains
|
||||
    ....
|
||||
  end type psb_d_ell_sparse_mat
|
||||
</pre>
|
||||
<!--l. 295--><p class="nopar" > </div></div>
|
||||
<h5 class="likesubsubsectionHead"><a
|
||||
id="x19-149000"></a>Hacked ELLPACK</h5>
|
||||
<!--l. 303--><p class="noindent" >The <span
|
||||
class="cmti-10">hacked ELLPACK </span>(<span
|
||||
class="cmbx-10">HLL</span>) format alleviates the main problem of the ELLPACK
|
||||
format, that is, the amount of memory required by padding for sparse matrices in
|
||||
which the maximum row length is larger than the average.
|
||||
|
||||
|
||||
|
||||
<!--l. 308--><p class="indent" > The number of elements allocated to padding is
|
||||
[(<span
|
||||
class="cmmi-10">m</span><span
|
||||
class="cmsy-10">*</span><span
|
||||
class="cmmi-10">maxNR</span>) <span
|
||||
class="cmsy-10">- </span>(<span
|
||||
class="cmmi-10">m</span><span
|
||||
class="cmsy-10">*</span><span
|
||||
class="cmmi-10">avgNR</span>) = <span
|
||||
class="cmmi-10">m</span><span
|
||||
class="cmsy-10">* </span>(<span
|
||||
class="cmmi-10">maxNR</span><span
|
||||
class="cmsy-10">-</span><span
|
||||
class="cmmi-10">avgNR</span>)] for both <span class="obeylines-h"><span class="verb"><span
|
||||
class="cmtt-10">AS</span></span></span> and <span class="obeylines-h"><span class="verb"><span
|
||||
class="cmtt-10">JA</span></span></span> arrays,
|
||||
where <span
|
||||
class="cmmi-10">m </span>is equal to the number of rows of the matrix, <span
|
||||
class="cmmi-10">maxNR </span>is the maximum
|
||||
number of nonzero elements in every row and <span
|
||||
class="cmmi-10">avgNR </span>is the average number of
|
||||
nonzeros. Therefore a single densely populated row can seriously affect the total size
|
||||
of the allocation.
|
||||
<!--l. 317--><p class="indent" > To limit this effect, in the HLL format we break the original matrix into equally
|
||||
sized groups of rows (called <span
|
||||
class="cmti-10">hacks</span>), and then store these groups as independent
|
||||
matrices in ELLPACK format. The groups can be arranged selecting rows in an
|
||||
arbitrarily manner; indeed, if the rows are sorted by decreasing number of nonzeros
|
||||
we obtain essentially the JAgged Diagonals format. If the rows are not in the original
|
||||
order, then an additional vector <span
|
||||
class="cmti-10">rIdx </span>is required, storing the actual row index for
|
||||
each row in the data structure.
|
||||
<!--l. 327--><p class="indent" > The multiple ELLPACK-like buffers are stacked together inside a single, one
|
||||
dimensional array; an additional vector <span
|
||||
class="cmti-10">hackOffsets </span>is provided to keep track of the
|
||||
individual submatrices. All hacks have the same number of rows <span
|
||||
class="cmti-10">hackSize</span>; hence, the
|
||||
<span
|
||||
class="cmti-10">hackOffsets </span>vector is an array of (<span
|
||||
class="cmmi-10">m∕hackSize</span>) + 1 elements, each one pointing to
|
||||
the first index of a submatrix inside the stacked <span
|
||||
class="cmti-10">cM</span>/<span
|
||||
class="cmti-10">rP </span>buffers, plus an additional
|
||||
element pointing past the end of the last block, where the next one would begin. We
|
||||
thus have the property that the elements of the <span
|
||||
class="cmmi-10">k</span>-th <span
|
||||
class="cmti-10">hack </span>are stored between
|
||||
<span class="obeylines-h"><span class="verb"><span
|
||||
class="cmtt-10">hackOffsets[k]</span></span></span> and <span class="obeylines-h"><span class="verb"><span
|
||||
class="cmtt-10">hackOffsets[k+1]</span></span></span>, similarly to what happens in the CSR
|
||||
format.
|
||||
<!--l. 342--><p class="indent" > <hr class="figure"><div class="figure"
|
||||
>
|
||||
|
||||
|
||||
|
||||
<a
|
||||
id="x19-149001r7"></a>
|
||||
|
||||
|
||||
|
||||
<!--l. 346--><p class="noindent" ><img
|
||||
src="hll.png" alt="PIC"
|
||||
width="248" height="248" >
|
||||
<br /> <div class="caption"
|
||||
><span class="id">Figure 7: </span><span
|
||||
class="content">Hacked ELLPACK compression of matrix in Figure <a
|
||||
href="#x19-146002r5">5<!--tex4ht:ref: fig:dense --></a></span></div><!--tex4ht:label?: x19-149001r7 -->
|
||||
|
||||
|
||||
|
||||
<!--l. 352--><p class="indent" > </div><hr class="endfigure">
|
||||
<!--l. 354--><p class="indent" > With this data structure a very long row only affects one hack, and therefore the
|
||||
additional memory is limited to the hack in which the row appears.
|
||||
<!--l. 358--><p class="indent" > The relevant data type is <span class="obeylines-h"><span class="verb"><span
|
||||
class="cmtt-10">psb_T_hll_sparse_mat</span></span></span>:
|
||||
<div class="center"
|
||||
>
|
||||
<!--l. 374--><p class="noindent" >
|
||||
<div class="minipage"><pre class="verbatim" id="verbatim-105">
|
||||
  type, extends(psb_d_base_sparse_mat) :: psb_d_hll_sparse_mat
|
||||
    !
|
||||
    ! HLL format. (Hacked ELL)
|
||||
    !
|
||||
    integer(psb_ipk_) :: hksz
|
||||
    integer(psb_ipk_), allocatable :: irn(:), ja(:), idiag(:), hkoffs(:)
|
||||
    real(psb_dpk_), allocatable :: val(:)
|
||||
|
||||
  contains
|
||||
   ....
|
||||
  end type
|
||||
</pre>
|
||||
<!--l. 388--><p class="nopar" > </div></div>
|
||||
<h5 class="likesubsubsectionHead"><a
|
||||
id="x19-150000"></a>Diagonal storage</h5>
|
||||
<!--l. 396--><p class="noindent" >The DIAgonal (DIA) format (shown in Figure <a
|
||||
href="#x19-150001r8">8<!--tex4ht:ref: fig:dia --></a>) has a 2-dimensional array <span class="obeylines-h"><span class="verb"><span
|
||||
class="cmtt-10">AS</span></span></span>
|
||||
containing in each column the coefficients along a diagonal of the matrix, and an
|
||||
integer array <span class="obeylines-h"><span class="verb"><span
|
||||
class="cmtt-10">OFFSET</span></span></span> that determines where each diagonal starts. The diagonals in <span class="obeylines-h"><span class="verb"><span
|
||||
class="cmtt-10">AS</span></span></span>
|
||||
are padded with zeros as necessary.
|
||||
<!--l. 402--><p class="indent" > The code to compute the matrix-vector product <span
|
||||
class="cmmi-10">y </span>= <span
|
||||
class="cmmi-10">Ax </span>is shown in Alg. <a
|
||||
href="#x19-150003r2">2<!--tex4ht:ref: alg:dia --></a>; it
|
||||
costs one memory read per outer iteration, plus three memory reads, one memory
|
||||
write and two floating-point operations per inner iteration. The accesses to
|
||||
<span class="obeylines-h"><span class="verb"><span
|
||||
class="cmtt-10">AS</span></span></span> and <span class="obeylines-h"><span class="verb"><span
|
||||
class="cmtt-10">x</span></span></span> are in strict sequential order, therefore no indirect addressing is
|
||||
required.
|
||||
<!--l. 409--><p class="indent" > <hr class="figure"><div class="figure"
|
||||
>
|
||||
|
||||
|
||||
|
||||
<a
|
||||
id="x19-150001r8"></a>
|
||||
|
||||
|
||||
|
||||
<!--l. 413--><p class="noindent" ><img
|
||||
src="dia.png" alt="PIC"
|
||||
width="248" height="248" >
|
||||
<br /> <div class="caption"
|
||||
><span class="id">Figure 8: </span><span
|
||||
class="content">DIA compression of matrix in Figure <a
|
||||
href="#x19-146002r5">5<!--tex4ht:ref: fig:dense --></a></span></div><!--tex4ht:label?: x19-150001r8 -->
|
||||
|
||||
|
||||
|
||||
<!--l. 419--><p class="indent" > </div><hr class="endfigure">
|
||||
<a
|
||||
id="x19-150002r2"></a>
|
||||
|
||||
|
||||
|
||||
<!--l. 423--><p class="indent" > <hr class="float"><div class="float"
|
||||
>
|
||||
|
||||
|
||||
|
||||
<div class="center"
|
||||
>
|
||||
<!--l. 437--><p class="noindent" >
|
||||
<div class="minipage"><pre class="verbatim" id="verbatim-106">
|
||||
    do j=1,ndiag
|
||||
      if (offset(j) > 0) then
|
||||
        ir1 = 1; ir2 = m - offset(j);
|
||||
      else
|
||||
        ir1 = 1 - offset(j); ir2 = m;
|
||||
      end if
|
||||
      do i=ir1,ir2
|
||||
        y(i) = y(i) + alpha*as(i,j)*x(i+offset(j))
|
||||
      end do
|
||||
    end do
|
||||
</pre>
|
||||
<!--l. 450--><p class="nopar" > </div></div>
|
||||
<a
|
||||
id="x19-150003r2"></a>
|
||||
<a
|
||||
id="x19-150004"></a>
|
||||
<span
|
||||
class="cmbx-10">Algorithm</span><span
|
||||
class="cmbx-10"> 2:</span>  Matrix-Vector product in DIA format
|
||||
|
||||
|
||||
|
||||
</div><hr class="endfloat" />
|
||||
<!--l. 458--><p class="indent" > The relevant data type is <span class="obeylines-h"><span class="verb"><span
|
||||
class="cmtt-10">psb_T_dia_sparse_mat</span></span></span>:
|
||||
<div class="center"
|
||||
>
|
||||
<!--l. 473--><p class="noindent" >
|
||||
<div class="minipage"><pre class="verbatim" id="verbatim-107">
|
||||
  type, extends(psb_d_base_sparse_mat) :: psb_d_dia_sparse_mat
|
||||
    !
|
||||
    ! DIA format, extended.
|
||||
    !
|
||||
|
||||
    integer(psb_ipk_), allocatable :: offset(:)
|
||||
    integer(psb_ipk_) :: nzeros
|
||||
    real(psb_dpk_), allocatable :: data(:,:)
|
||||
|
||||
  end type
|
||||
</pre>
|
||||
<!--l. 486--><p class="nopar" > </div></div>
|
||||
<h5 class="likesubsubsectionHead"><a
|
||||
id="x19-151000"></a>Hacked DIA</h5>
|
||||
<!--l. 495--><p class="noindent" >Storage by DIAgonals is an attractive option for matrices whose coefficients are
|
||||
located on a small set of diagonals, since they do away with storing explicitly the
|
||||
indices and therefore reduce significantly memory traffic. However, having a few
|
||||
coefficients outside of the main set of diagonals may significantly increase the
|
||||
amount of needed padding; moreover, while the DIA code is easily vectorized,
|
||||
it does not necessarily make optimal use of the memory hierarchy. While
|
||||
processing each diagonal we are updating entries in the output vector <span class="obeylines-h"><span class="verb"><span
|
||||
class="cmtt-10">y</span></span></span>,
|
||||
which is then accessed multiple times; if the vector <span class="obeylines-h"><span class="verb"><span
|
||||
class="cmtt-10">y</span></span></span> is too large to remain
|
||||
in the cache memory, the associated cache miss penalty is paid multiple
|
||||
times.
|
||||
<!--l. 507--><p class="indent" > The <span
|
||||
class="cmti-10">hacked DIA </span>(<span
|
||||
class="cmbx-10">HDIA</span>) format was designed to contain the amount of padding,
|
||||
by breaking the original matrix into equally sized groups of rows (<span
|
||||
class="cmti-10">hacks</span>), and then
|
||||
storing these groups as independent matrices in DIA format. This approach is similar
|
||||
to that of HLL, and requires using an offset vector for each submatrix. Again,
|
||||
similarly to HLL, the various submatrices are stacked inside a linear array to
|
||||
improve memory management. The fact that the matrix is accessed in slices
|
||||
helps in reducing cache misses, especially regarding accesses to the vector
|
||||
<span class="obeylines-h"><span class="verb"><span
|
||||
class="cmtt-10">y</span></span></span>.
|
||||
<!--l. 519--><p class="indent" > An additional vector <span
|
||||
class="cmti-10">hackOffsets </span>is provided to complete the matrix format; given
|
||||
that <span
|
||||
class="cmti-10">hackSize </span>is the number of rows of each hack, the <span
|
||||
class="cmti-10">hackOffsets </span>vector is made by
|
||||
an array of (<span
|
||||
class="cmmi-10">m∕hackSize</span>) + 1 elements, pointing to the first diagonal offset of a
|
||||
submatrix inside the stacked <span
|
||||
class="cmti-10">offsets </span>buffers, plus an additional element equal to the
|
||||
number of nonzero diagonals in the whole matrix. We thus have the property that
|
||||
the number of diagonals of the <span
|
||||
class="cmmi-10">k</span>-th <span
|
||||
class="cmti-10">hack </span>is given by <span
|
||||
class="cmti-10">hackOffsets[k+1] -</span>
|
||||
<span
|
||||
class="cmti-10">hackOffsets[k]</span>.
|
||||
<!--l. 529--><p class="indent" > <hr class="figure"><div class="figure"
|
||||
>
|
||||
|
||||
|
||||
|
||||
<a
|
||||
id="x19-151001r9"></a>
|
||||
|
||||
|
||||
|
||||
<!--l. 533--><p class="noindent" ><img
|
||||
src="hdia.png" alt="PIC"
|
||||
width="248" height="248" >
|
||||
<br /> <div class="caption"
|
||||
><span class="id">Figure 9: </span><span
|
||||
class="content">Hacked DIA compression of matrix in Figure <a
|
||||
href="#x19-146002r5">5<!--tex4ht:ref: fig:dense --></a></span></div><!--tex4ht:label?: x19-151001r9 -->
|
||||
|
||||
|
||||
|
||||
<!--l. 539--><p class="indent" > </div><hr class="endfigure">
|
||||
<!--l. 541--><p class="indent" > The relevant data type is <span class="obeylines-h"><span class="verb"><span
|
||||
class="cmtt-10">psb_T_hdia_sparse_mat</span></span></span>:
|
||||
<div class="center"
|
||||
>
|
||||
<!--l. 568--><p class="noindent" >
|
||||
<div class="minipage"><pre class="verbatim" id="verbatim-108">
|
||||
  type pm
|
||||
     real(psb_dpk_), allocatable  :: data(:,:)
|
||||
  end type pm
|
||||
|
||||
  type po
|
||||
     integer(psb_ipk_), allocatable  :: off(:)
|
||||
  end type po
|
||||
|
||||
  type, extends(psb_d_base_sparse_mat) :: psb_d_hdia_sparse_mat
|
||||
    !
|
||||
    ! HDIA format, extended.
|
||||
    !
|
||||
|
||||
    type(pm), allocatable :: hdia(:)
|
||||
    type(po), allocatable :: offset(:)
|
||||
    integer(psb_ipk_) :: nblocks, nzeros
|
||||
    integer(psb_ipk_) :: hack = 64
|
||||
    integer(psb_long_int_k_) :: dim=0
|
||||
|
||||
  contains
|
||||
   ....
|
||||
  end type
|
||||
</pre>
|
||||
<!--l. 593--><p class="nopar" > </div></div>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<h4 class="subsectionHead"><span class="titlemark">12.4 </span> <a
|
||||
id="x19-15200012.4"></a>CUDA-class extensions</h4>
|
||||
<!--l. 4--><p class="noindent" >For computing with CUDA we define a dual memorization strategy in which each
|
||||
variable on the CPU (“host”) side has a GPU (“device”) side. When a GPU-type
|
||||
variable is initialized, the data contained is (usually) the same on both sides. Each
|
||||
operator invoked on the variable may change the data so that only the host side or
|
||||
the device side are up-to-date.
|
||||
<!--l. 11--><p class="indent" > Keeping track of the updates to data in the variables is essential: we want to
|
||||
perform most computations on the GPU, but we cannot afford the time needed to
|
||||
move data between the host memory and the device memory because the bandwidth
|
||||
of the interconnection bus would become the main bottleneck of the computation.
|
||||
Thus, each and every computational routine in the library is built according to the
|
||||
following principles:
|
||||
<ul class="itemize1">
|
||||
<li class="itemize">
|
||||
<!--l. 18--><p class="noindent" >If the data type being handled is GPU-enabled, make sure that its device
|
||||
copy is up to date, perform any arithmetic operation on the GPU, and
|
||||
if the data has been altered as a result, mark the main-memory copy as
|
||||
outdated.
|
||||
</li>
|
||||
<li class="itemize">
|
||||
<!--l. 22--><p class="noindent" >The main-memory copy is never updated unless this is requested by the user
|
||||
either
|
||||
<dl class="description"><dt class="description">
|
||||
<!--l. 25--><p class="noindent" >
|
||||
<span
|
||||
class="cmbx-10">explicitly</span> </dt><dd
|
||||
class="description">
|
||||
<!--l. 25--><p class="noindent" >by invoking a synchronization method;
|
||||
</dd><dt class="description">
|
||||
<!--l. 26--><p class="noindent" >
|
||||
<span
|
||||
class="cmbx-10">implicitly</span> </dt><dd
|
||||
class="description">
|
||||
<!--l. 26--><p class="noindent" >by invoking a method that involves other data items that are not
|
||||
GPU-enabled, e.g., by assignment ov a vector to a normal array.</dd></dl>
|
||||
</li></ul>
|
||||
<!--l. 31--><p class="noindent" >In this way, data items are put on the GPU memory “on demand” and remain there as
|
||||
long as “normal” computations are carried out. As an example, the following call to a
|
||||
matrix-vector product
|
||||
<div class="center"
|
||||
>
|
||||
<!--l. 39--><p class="noindent" >
|
||||
<div class="minipage"><pre class="verbatim" id="verbatim-109">
|
||||
    call psb_spmm(alpha,a,x,beta,y,desc_a,info)
|
||||
</pre>
|
||||
<!--l. 43--><p class="nopar" > </div></div>
|
||||
|
||||
|
||||
|
||||
<!--l. 47--><p class="noindent" >will transparently and automatically be performed on the GPU whenever all three data
|
||||
inputs <code class="lstinline"><span style="color:#000000">a</span></code>, <code class="lstinline"><span style="color:#000000">x</span></code> and <code class="lstinline"><span style="color:#000000">y</span></code> are GPU-enabled. If a program makes many such calls sequentially,
|
||||
then
|
||||
<ul class="itemize1">
|
||||
<li class="itemize">
|
||||
<!--l. 52--><p class="noindent" >The first kernel invocation will find the data in main memory, and will
|
||||
copy it to the GPU memory, thus incurring a significant overhead; the
|
||||
result is however <span
|
||||
class="cmti-10">not </span>copied back, and therefore:
|
||||
</li>
|
||||
<li class="itemize">
|
||||
<!--l. 56--><p class="noindent" >Subsequent kernel invocations involving the same vector will find the data
|
||||
on the GPU side so that they will run at full speed.</li></ul>
|
||||
<!--l. 60--><p class="noindent" >For all invocations after the first the only data that will have to be transferred to/from
|
||||
the main memory will be the scalars <code class="lstinline"><span style="color:#000000">alpha</span></code> and <code class="lstinline"><span style="color:#000000">beta</span></code>, and the return code
|
||||
<code class="lstinline"><span style="color:#000000">info</span></code>.
|
||||
<!--l. 64--><p class="indent" >
|
||||
<dl class="description"><dt class="description">
|
||||
<!--l. 65--><p class="noindent" >
|
||||
<span
|
||||
class="cmbx-10">Vectors:</span> </dt><dd
|
||||
class="description">
|
||||
<!--l. 65--><p class="noindent" >The data type <code class="lstinline"><span style="color:#000000">psb_T_vect_gpu</span></code> provides a GPU-enabled extension of
|
||||
the inner type <code class="lstinline"><span style="color:#000000">psb_T_base_vect_type</span></code>, and must be used together with
|
||||
the other inner matrix type to make full use of the GPU computational
|
||||
capabilities;
|
||||
</dd><dt class="description">
|
||||
<!--l. 69--><p class="noindent" >
|
||||
<span
|
||||
class="cmbx-10">CSR:</span> </dt><dd
|
||||
class="description">
|
||||
<!--l. 69--><p class="noindent" >The data type <code class="lstinline"><span style="color:#000000">psb_T_csrg_sparse_mat</span></code> provides an interface to the GPU
|
||||
version of CSR available in the NVIDIA CuSPARSE library;
|
||||
</dd><dt class="description">
|
||||
<!--l. 72--><p class="noindent" >
|
||||
<span
|
||||
class="cmbx-10">HYB:</span> </dt><dd
|
||||
class="description">
|
||||
<!--l. 72--><p class="noindent" >The data type <code class="lstinline"><span style="color:#000000">psb_T_hybg_sparse_mat</span></code> provides an interface to the HYB
|
||||
GPU storage available in the NVIDIA CuSPARSE library. The internal
|
||||
structure is opaque, hence the host side is just CSR; the HYB data format
|
||||
is only available up to CUDA version 10.
|
||||
</dd><dt class="description">
|
||||
<!--l. 77--><p class="noindent" >
|
||||
<span
|
||||
class="cmbx-10">ELL:</span> </dt><dd
|
||||
class="description">
|
||||
<!--l. 77--><p class="noindent" >The data type <code class="lstinline"><span style="color:#000000">psb_T_elg_sparse_mat</span></code> provides an interface to the
|
||||
ELLPACK implementation from SPGPU;
|
||||
|
||||
|
||||
|
||||
</dd><dt class="description">
|
||||
<!--l. 80--><p class="noindent" >
|
||||
<span
|
||||
class="cmbx-10">HLL:</span> </dt><dd
|
||||
class="description">
|
||||
<!--l. 80--><p class="noindent" >The data type <code class="lstinline"><span style="color:#000000">psb_T_hlg_sparse_mat</span></code> provides an interface to the Hacked
|
||||
ELLPACK implementation from SPGPU;
|
||||
</dd><dt class="description">
|
||||
<!--l. 82--><p class="noindent" >
|
||||
<span
|
||||
class="cmbx-10">HDIA:</span> </dt><dd
|
||||
class="description">
|
||||
<!--l. 82--><p class="noindent" >The data type <code class="lstinline"><span style="color:#000000">psb_T_hdiag_sparse_mat</span></code> provides an interface to the
|
||||
Hacked DIAgonals implementation from SPGPU;</dd></dl>
|
||||
|
||||
|
||||
|
||||
<!--l. 87--><div class="crosslinks"><p class="noindent">[<a
|
||||
href="userhtmlse11.html" >prev</a>] [<a
|
||||
href="userhtmlse11.html#tailuserhtmlse11.html" >prev-tail</a>] [<a
|
||||
href="userhtmlse12.html" >front</a>] [<a
|
||||
href="userhtml.html# " >up</a>] </p></div>
|
||||
<!--l. 87--><p class="indent" > <a
|
||||
id="tailuserhtmlse12.html"></a>
|
||||
</body></html>
|
||||
@ -1,299 +0,0 @@
|
||||
<!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN"
|
||||
"http://www.w3.org/TR/html4/loose.dtd">
|
||||
<html >
|
||||
<head><title>CUDA Environment Routines</title>
|
||||
<meta http-equiv="Content-Type" content="text/html; charset=iso-8859-1">
|
||||
<meta name="generator" content="TeX4ht (https://tug.org/tex4ht/)">
|
||||
<meta name="originator" content="TeX4ht (https://tug.org/tex4ht/)">
|
||||
<!-- html,3 -->
|
||||
<meta name="src" content="userhtml.tex">
|
||||
<link rel="stylesheet" type="text/css" href="userhtml.css">
|
||||
</head><body
|
||||
>
|
||||
<!--l. 87--><div class="crosslinks"><p class="noindent">[<a
|
||||
href="userhtmlse12.html" >prev</a>] [<a
|
||||
href="userhtmlse12.html#tailuserhtmlse12.html" >prev-tail</a>] [<a
|
||||
href="userhtmlse10.html#tailuserhtmlse13.html">tail</a>] [<a
|
||||
href="userhtml.html# " >up</a>] </p></div>
|
||||
<h3 class="sectionHead"><span class="titlemark">13 </span> <a
|
||||
id="x20-15300013"></a>CUDA Environment Routines</h3>
|
||||
<!--l. 91--><p class="noindent" >
|
||||
<h4 class="likesubsectionHead"><a
|
||||
id="x20-154000"></a>psb_cuda_init — Initializes PSBLAS-CUDA environment</h4>
|
||||
<a
|
||||
id="Q1-20-191"></a>
|
||||
<div class="center"
|
||||
>
|
||||
<!--l. 99--><p class="noindent" >
|
||||
<div class="minipage"><pre class="verbatim" id="verbatim-110">
|
||||
call psb_cuda_init(ctxt [, device])
|
||||
</pre>
|
||||
<!--l. 103--><p class="nopar" > </div></div>
|
||||
<!--l. 108--><p class="noindent" >This subroutine initializes the PSBLAS-CUDA environment.
|
||||
<dl class="description"><dt class="description">
|
||||
<!--l. 110--><p class="noindent" >
|
||||
<span
|
||||
class="cmbx-10">Type:</span> </dt><dd
|
||||
class="description">
|
||||
<!--l. 110--><p class="noindent" >Synchronous.
|
||||
</dd><dt class="description">
|
||||
<!--l. 111--><p class="noindent" >
|
||||
<span
|
||||
class="cmbx-10">On Entry</span> </dt><dd
|
||||
class="description">
|
||||
<!--l. 111--><p class="noindent" >
|
||||
</dd><dt class="description">
|
||||
<!--l. 112--><p class="noindent" >
|
||||
<span
|
||||
class="cmbx-10">device</span> </dt><dd
|
||||
class="description">
|
||||
<!--l. 112--><p class="noindent" >ID of CUDA device to attach to.<br
|
||||
class="newline" />Scope: <span
|
||||
class="cmbx-10">local</span>.<br
|
||||
class="newline" />Type: <span
|
||||
class="cmbx-10">optional</span>.<br
|
||||
class="newline" />Intent: <span
|
||||
class="cmbx-10">in</span>.<br
|
||||
class="newline" />Specified as: an integer value.  Default: use <code class="lstinline"><span style="color:#000000">mod</span><span style="color:#000000">(</span><span style="color:#000000">iam</span><span style="color:#000000">,</span><span style="color:#000000">ngpu</span><span style="color:#000000">)</span></code> where <code class="lstinline"><span style="color:#000000">iam</span></code> is
|
||||
the calling process index and <code class="lstinline"><span style="color:#000000">ngpu</span></code> is the total number of CUDA devices
|
||||
available on the current node.</dd></dl>
|
||||
<!--l. 123--><p class="noindent" ><span
|
||||
class="cmbx-12">Notes</span>
|
||||
|
||||
|
||||
|
||||
<ol class="enumerate1" >
|
||||
<li
|
||||
class="enumerate" id="x20-154002x1">
|
||||
<!--l. 125--><p class="noindent" >A call to this routine must precede any other PSBLAS-CUDA call.</li></ol>
|
||||
<!--l. 129--><p class="noindent" >
|
||||
<h4 class="likesubsectionHead"><a
|
||||
id="x20-155000"></a>psb_cuda_exit — Exit from PSBLAS-CUDA environment</h4>
|
||||
<a
|
||||
id="Q1-20-193"></a>
|
||||
<div class="center"
|
||||
>
|
||||
<!--l. 137--><p class="noindent" >
|
||||
<div class="minipage"><pre class="verbatim" id="verbatim-111">
|
||||
call psb_cuda_exit(ctxt)
|
||||
</pre>
|
||||
<!--l. 141--><p class="nopar" > </div></div>
|
||||
<!--l. 146--><p class="noindent" >This subroutine exits from the PSBLAS CUDA context.
|
||||
<dl class="description"><dt class="description">
|
||||
<!--l. 148--><p class="noindent" >
|
||||
<span
|
||||
class="cmbx-10">Type:</span> </dt><dd
|
||||
class="description">
|
||||
<!--l. 148--><p class="noindent" >Synchronous.
|
||||
</dd><dt class="description">
|
||||
<!--l. 149--><p class="noindent" >
|
||||
<span
|
||||
class="cmbx-10">On Entry</span> </dt><dd
|
||||
class="description">
|
||||
<!--l. 149--><p class="noindent" >
|
||||
</dd><dt class="description">
|
||||
<!--l. 150--><p class="noindent" >
|
||||
<span
|
||||
class="cmbx-10">ctxt</span> </dt><dd
|
||||
class="description">
|
||||
<!--l. 150--><p class="noindent" >the communication context identifying the virtual parallel machine.<br
|
||||
class="newline" />Scope: <span
|
||||
class="cmbx-10">global</span>.<br
|
||||
class="newline" />Type: <span
|
||||
class="cmbx-10">required</span>.<br
|
||||
class="newline" />Intent: <span
|
||||
class="cmbx-10">in</span>.<br
|
||||
class="newline" />Specified as: an integer variable.</dd></dl>
|
||||
<!--l. 161--><p class="noindent" >
|
||||
<h4 class="likesubsectionHead"><a
|
||||
id="x20-156000"></a>psb_cuda_DeviceSync — Synchronize CUDA device</h4>
|
||||
<a
|
||||
id="Q1-20-195"></a>
|
||||
|
||||
|
||||
|
||||
<div class="center"
|
||||
>
|
||||
<!--l. 169--><p class="noindent" >
|
||||
<div class="minipage"><pre class="verbatim" id="verbatim-112">
|
||||
call psb_cuda_DeviceSync()
|
||||
</pre>
|
||||
<!--l. 173--><p class="nopar" > </div></div>
|
||||
<!--l. 178--><p class="noindent" >This subroutine ensures that all previosly invoked kernels, i.e. all invocation of
|
||||
CUDA-side code, have completed.
|
||||
<!--l. 182--><p class="noindent" >
|
||||
<h4 class="likesubsectionHead"><a
|
||||
id="x20-157000"></a>psb_cuda_getDeviceCount </h4>
|
||||
<a
|
||||
id="Q1-20-197"></a>
|
||||
<div class="center"
|
||||
>
|
||||
<!--l. 190--><p class="noindent" >
|
||||
<div class="minipage"><pre class="verbatim" id="verbatim-113">
|
||||
ngpus =  psb_cuda_getDeviceCount()
|
||||
</pre>
|
||||
<!--l. 194--><p class="nopar" > </div></div>
|
||||
<!--l. 199--><p class="noindent" >Get number of devices available on current computing node.
|
||||
<!--l. 201--><p class="noindent" >
|
||||
<h4 class="likesubsectionHead"><a
|
||||
id="x20-158000"></a>psb_cuda_getDevice </h4>
|
||||
<a
|
||||
id="Q1-20-199"></a>
|
||||
<div class="center"
|
||||
>
|
||||
<!--l. 209--><p class="noindent" >
|
||||
<div class="minipage"><pre class="verbatim" id="verbatim-114">
|
||||
ngpus =  psb_cuda_getDevice()
|
||||
</pre>
|
||||
<!--l. 213--><p class="nopar" > </div></div>
|
||||
<!--l. 218--><p class="noindent" >Get device in use by current process.
|
||||
<!--l. 220--><p class="noindent" >
|
||||
<h4 class="likesubsectionHead"><a
|
||||
id="x20-159000"></a>psb_cuda_setDevice </h4>
|
||||
<a
|
||||
id="Q1-20-201"></a>
|
||||
|
||||
|
||||
|
||||
<div class="center"
|
||||
>
|
||||
<!--l. 228--><p class="noindent" >
|
||||
<div class="minipage"><pre class="verbatim" id="verbatim-115">
|
||||
info = psb_cuda_setDevice(dev)
|
||||
</pre>
|
||||
<!--l. 232--><p class="nopar" > </div></div>
|
||||
<!--l. 237--><p class="noindent" >Set device to be used by current process.
|
||||
<!--l. 239--><p class="noindent" >
|
||||
<h4 class="likesubsectionHead"><a
|
||||
id="x20-160000"></a>psb_cuda_DeviceHasUVA </h4>
|
||||
<a
|
||||
id="Q1-20-203"></a>
|
||||
<div class="center"
|
||||
>
|
||||
<!--l. 247--><p class="noindent" >
|
||||
<div class="minipage"><pre class="verbatim" id="verbatim-116">
|
||||
hasUva = psb_cuda_DeviceHasUVA()
|
||||
</pre>
|
||||
<!--l. 251--><p class="nopar" > </div></div>
|
||||
<!--l. 256--><p class="noindent" >Returns true if device currently in use supports UVA (Unified Virtual Addressing).
|
||||
<!--l. 259--><p class="noindent" >
|
||||
<h4 class="likesubsectionHead"><a
|
||||
id="x20-161000"></a>psb_cuda_WarpSize </h4>
|
||||
<a
|
||||
id="Q1-20-205"></a>
|
||||
<div class="center"
|
||||
>
|
||||
<!--l. 267--><p class="noindent" >
|
||||
<div class="minipage"><pre class="verbatim" id="verbatim-117">
|
||||
nw = psb_cuda_WarpSize()
|
||||
</pre>
|
||||
<!--l. 271--><p class="nopar" > </div></div>
|
||||
<!--l. 276--><p class="noindent" >Returns the warp size.
|
||||
<!--l. 279--><p class="noindent" >
|
||||
<h4 class="likesubsectionHead"><a
|
||||
id="x20-162000"></a>psb_cuda_MultiProcessors </h4>
|
||||
<a
|
||||
id="Q1-20-207"></a>
|
||||
|
||||
|
||||
|
||||
<div class="center"
|
||||
>
|
||||
<!--l. 287--><p class="noindent" >
|
||||
<div class="minipage"><pre class="verbatim" id="verbatim-118">
|
||||
nmp = psb_cuda_MultiProcessors()
|
||||
</pre>
|
||||
<!--l. 291--><p class="nopar" > </div></div>
|
||||
<!--l. 296--><p class="noindent" >Returns the number of multiprocessors in the CUDA device.
|
||||
<!--l. 298--><p class="noindent" >
|
||||
<h4 class="likesubsectionHead"><a
|
||||
id="x20-163000"></a>psb_cuda_MaxThreadsPerMP </h4>
|
||||
<a
|
||||
id="Q1-20-209"></a>
|
||||
<div class="center"
|
||||
>
|
||||
<!--l. 306--><p class="noindent" >
|
||||
<div class="minipage"><pre class="verbatim" id="verbatim-119">
|
||||
nt = psb_cuda_MaxThreadsPerMP()
|
||||
</pre>
|
||||
<!--l. 310--><p class="nopar" > </div></div>
|
||||
<!--l. 315--><p class="noindent" >Returns the maximum number of threads per multiprocessor.
|
||||
<!--l. 318--><p class="noindent" >
|
||||
<h4 class="likesubsectionHead"><a
|
||||
id="x20-164000"></a>psb_cuda_MaxRegistersPerBlock </h4>
|
||||
<a
|
||||
id="Q1-20-211"></a>
|
||||
<div class="center"
|
||||
>
|
||||
<!--l. 326--><p class="noindent" >
|
||||
<div class="minipage"><pre class="verbatim" id="verbatim-120">
|
||||
nr = psb_cuda_MaxRegistersPerBlock()
|
||||
</pre>
|
||||
<!--l. 330--><p class="nopar" > </div></div>
|
||||
<!--l. 335--><p class="noindent" >Returns the maximum number of register per thread block.
|
||||
<!--l. 338--><p class="noindent" >
|
||||
<h4 class="likesubsectionHead"><a
|
||||
id="x20-165000"></a>psb_cuda_MemoryClockRate </h4>
|
||||
<a
|
||||
id="Q1-20-213"></a>
|
||||
|
||||
|
||||
|
||||
<div class="center"
|
||||
>
|
||||
<!--l. 346--><p class="noindent" >
|
||||
<div class="minipage"><pre class="verbatim" id="verbatim-121">
|
||||
cl = psb_cuda_MemoryClockRate()
|
||||
</pre>
|
||||
<!--l. 350--><p class="nopar" > </div></div>
|
||||
<!--l. 355--><p class="noindent" >Returns the memory clock rate in KHz, as an integer.
|
||||
<!--l. 357--><p class="noindent" >
|
||||
<h4 class="likesubsectionHead"><a
|
||||
id="x20-166000"></a>psb_cuda_MemoryBusWidth </h4>
|
||||
<a
|
||||
id="Q1-20-215"></a>
|
||||
<div class="center"
|
||||
>
|
||||
<!--l. 365--><p class="noindent" >
|
||||
<div class="minipage"><pre class="verbatim" id="verbatim-122">
|
||||
nb = psb_cuda_MemoryBusWidth()
|
||||
</pre>
|
||||
<!--l. 369--><p class="nopar" > </div></div>
|
||||
<!--l. 374--><p class="noindent" >Returns the memory bus width in bits.
|
||||
<!--l. 376--><p class="noindent" >
|
||||
<h4 class="likesubsectionHead"><a
|
||||
id="x20-167000"></a>psb_cuda_MemoryPeakBandwidth </h4>
|
||||
<a
|
||||
id="Q1-20-217"></a>
|
||||
<div class="center"
|
||||
>
|
||||
<!--l. 384--><p class="noindent" >
|
||||
<div class="minipage"><pre class="verbatim" id="verbatim-123">
|
||||
bw = psb_cuda_MemoryPeakBandwidth()
|
||||
</pre>
|
||||
<!--l. 388--><p class="nopar" > </div></div>
|
||||
<!--l. 392--><p class="noindent" >Returns the peak memory bandwidth in MB/s (real double precision).
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<!--l. 126--><p class="indent" >
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<!--l. 2--><div class="crosslinks"><p class="noindent">[<a
|
||||
href="userhtmlse12.html" >prev</a>] [<a
|
||||
href="userhtmlse12.html#tailuserhtmlse12.html" >prev-tail</a>] [<a
|
||||
href="userhtmlse13.html" >front</a>] [<a
|
||||
href="userhtml.html# " >up</a>] </p></div>
|
||||
<!--l. 2--><p class="indent" > <a
|
||||
id="tailuserhtmlse13.html"></a>
|
||||
</body></html>
|
||||
File diff suppressed because it is too large
Load Diff
File diff suppressed because it is too large
Load Diff
File diff suppressed because it is too large
Load Diff
File diff suppressed because it is too large
Load Diff
File diff suppressed because it is too large
Load Diff
File diff suppressed because one or more lines are too long
@ -1,395 +0,0 @@
|
||||
|
||||
\subsection{CUDA-class extensions}
|
||||
|
||||
For computing with CUDA we define a dual memorization strategy in
|
||||
which each variable on the CPU (``host'') side has a GPU (``device'')
|
||||
side. When a GPU-type variable is initialized, the data contained is
|
||||
(usually) the same on both sides. Each operator invoked on the
|
||||
variable may change the data so that only the host side or the device
|
||||
side are up-to-date.
|
||||
|
||||
Keeping track of the updates to data in the variables is essential: we want
|
||||
to perform most computations on the GPU, but we cannot afford the time
|
||||
needed to move data between the host memory and the device memory
|
||||
because the bandwidth of the interconnection bus would become the main
|
||||
bottleneck of the computation. Thus, each and every computational
|
||||
routine in the library is built according to the following principles:
|
||||
\begin{itemize}
|
||||
\item If the data type being handled is {GPU}-enabled, make sure that
|
||||
its device copy is up to date, perform any arithmetic operation on
|
||||
the {GPU}, and if the data has been altered as a result, mark
|
||||
the main-memory copy as outdated.
|
||||
\item The main-memory copy is never updated unless this is requested
|
||||
by the user either
|
||||
\begin{description}
|
||||
\item[explicitly] by invoking a synchronization method;
|
||||
\item[implicitly] by invoking a method that involves other data items
|
||||
that are not {GPU}-enabled, e.g., by assignment ov a vector to a
|
||||
normal array.
|
||||
\end{description}
|
||||
\end{itemize}
|
||||
In this way, data items are put on the {GPU} memory ``on demand'' and
|
||||
remain there as long as ``normal'' computations are carried out.
|
||||
As an example, the following call to a matrix-vector product
|
||||
\ifpdf
|
||||
\begin{minted}[breaklines=true,bgcolor=bg,fontsize=\small]{fortran}
|
||||
call psb_spmm(alpha,a,x,beta,y,desc_a,info)
|
||||
\end{minted}
|
||||
\else
|
||||
\begin{center}
|
||||
\begin{minipage}[tl]{0.9\textwidth}
|
||||
\begin{verbatim}
|
||||
call psb_spmm(alpha,a,x,beta,y,desc_a,info)
|
||||
\end{verbatim}
|
||||
\end{minipage}
|
||||
\end{center}
|
||||
\fi
|
||||
will transparently and automatically be performed on the {GPU} whenever
|
||||
all three data inputs \fortinline|a|, \fortinline|x| and
|
||||
\fortinline|y| are {GPU}-enabled. If a program makes many such calls
|
||||
sequentially, then
|
||||
\begin{itemize}
|
||||
\item The first kernel invocation will find the data in main memory,
|
||||
and will copy it to the {GPU} memory, thus incurring a significant
|
||||
overhead; the result is however \emph{not} copied back, and
|
||||
therefore:
|
||||
\item Subsequent kernel invocations involving the same vector will
|
||||
find the data on the {GPU} side so that they will run at full
|
||||
speed.
|
||||
\end{itemize}
|
||||
For all invocations after the first the only data that will have to be
|
||||
transferred to/from the main memory will be the scalars \fortinline|alpha|
|
||||
and \fortinline|beta|, and the return code \fortinline|info|.
|
||||
|
||||
\begin{description}
|
||||
\item[Vectors:] The data type \fortinline|psb_T_vect_gpu| provides a
|
||||
GPU-enabled extension of the inner type \fortinline|psb_T_base_vect_type|,
|
||||
and must be used together with the other inner matrix type to make
|
||||
full use of the GPU computational capabilities;
|
||||
\item[CSR:] The data type \fortinline|psb_T_csrg_sparse_mat| provides an
|
||||
interface to the GPU version of CSR available in the NVIDIA CuSPARSE
|
||||
library;
|
||||
\item[HYB:] The data type \fortinline|psb_T_hybg_sparse_mat| provides an
|
||||
interface to the HYB GPU storage available in the NVIDIA CuSPARSE
|
||||
library. The internal structure is opaque, hence the host side is
|
||||
just CSR; the HYB data format is only available up to CUDA version
|
||||
10.
|
||||
\item[ELL:] The data type \fortinline|psb_T_elg_sparse_mat| provides an
|
||||
interface to the ELLPACK implementation from SPGPU;
|
||||
|
||||
\item[HLL:] The data type \fortinline|psb_T_hlg_sparse_mat| provides an
|
||||
interface to the Hacked ELLPACK implementation from SPGPU;
|
||||
\item[HDIA:] The data type \fortinline|psb_T_hdiag_sparse_mat| provides an
|
||||
interface to the Hacked DIAgonals implementation from SPGPU;
|
||||
\end{description}
|
||||
|
||||
|
||||
\section{CUDA Environment Routines}
|
||||
\label{sec:cudaenv}
|
||||
|
||||
\subsection*{psb\_cuda\_init --- Initializes PSBLAS-CUDA
|
||||
environment}
|
||||
\addcontentsline{toc}{subsection}{psb\_cuda\_init}
|
||||
|
||||
\ifpdf
|
||||
\begin{minted}[breaklines=true]{fortran}
|
||||
call psb_cuda_init(ctxt [, device])
|
||||
\end{minted}
|
||||
\else
|
||||
\begin{center}
|
||||
\begin{minipage}[tl]{0.9\textwidth}
|
||||
\begin{verbatim}
|
||||
call psb_cuda_init(ctxt [, device])
|
||||
\end{verbatim}
|
||||
\end{minipage}
|
||||
\end{center}
|
||||
\fi
|
||||
|
||||
This subroutine initializes the PSBLAS-CUDA environment.
|
||||
\begin{description}
|
||||
\item[Type:] Synchronous.
|
||||
\item[\bf On Entry ]
|
||||
\item[device] ID of CUDA device to attach to.\\
|
||||
Scope: {\bf local}.\\
|
||||
Type: {\bf optional}.\\
|
||||
Intent: {\bf in}.\\
|
||||
Specified as: an integer value. \
|
||||
Default: use \fortinline|mod(iam,ngpu)| where \fortinline|iam| is the calling
|
||||
process index and \fortinline|ngpu| is the total number of CUDA devices
|
||||
available on the current node.
|
||||
\end{description}
|
||||
|
||||
|
||||
{\par\noindent\large\bfseries Notes}
|
||||
\begin{enumerate}
|
||||
\item A call to this routine must precede any other PSBLAS-CUDA call.
|
||||
\end{enumerate}
|
||||
|
||||
\subsection*{psb\_cuda\_exit --- Exit from PSBLAS-CUDA
|
||||
environment}
|
||||
\addcontentsline{toc}{subsection}{psb\_cuda\_exit}
|
||||
|
||||
\ifpdf
|
||||
\begin{minted}[breaklines=true]{fortran}
|
||||
call psb_cuda_exit(ctxt)
|
||||
\end{minted}
|
||||
\else
|
||||
\begin{center}
|
||||
\begin{minipage}[tl]{0.9\textwidth}
|
||||
\begin{verbatim}
|
||||
call psb_cuda_exit(ctxt)
|
||||
\end{verbatim}
|
||||
\end{minipage}
|
||||
\end{center}
|
||||
\fi
|
||||
|
||||
This subroutine exits from the PSBLAS CUDA context.
|
||||
\begin{description}
|
||||
\item[Type:] Synchronous.
|
||||
\item[\bf On Entry ]
|
||||
\item[ctxt] the communication context identifying the virtual
|
||||
parallel machine.\\
|
||||
Scope: {\bf global}.\\
|
||||
Type: {\bf required}.\\
|
||||
Intent: {\bf in}.\\
|
||||
Specified as: an integer variable.
|
||||
\end{description}
|
||||
|
||||
|
||||
|
||||
|
||||
\subsection*{psb\_cuda\_DeviceSync --- Synchronize CUDA device}
|
||||
\addcontentsline{toc}{subsection}{psb\_cuda\_DeviceSync}
|
||||
|
||||
\ifpdf
|
||||
\begin{minted}[breaklines=true]{fortran}
|
||||
call psb_cuda_DeviceSync()
|
||||
\end{minted}
|
||||
\else
|
||||
\begin{center}
|
||||
\begin{minipage}[tl]{0.9\textwidth}
|
||||
\begin{verbatim}
|
||||
call psb_cuda_DeviceSync()
|
||||
\end{verbatim}
|
||||
\end{minipage}
|
||||
\end{center}
|
||||
\fi
|
||||
|
||||
This subroutine ensures that all previosly invoked kernels, i.e. all
|
||||
invocation of CUDA-side code, have completed.
|
||||
|
||||
|
||||
\subsection*{psb\_cuda\_getDeviceCount }
|
||||
\addcontentsline{toc}{subsection}{psb\_cuda\_getDeviceCount}
|
||||
|
||||
\ifpdf
|
||||
\begin{minted}[breaklines=true]{fortran}
|
||||
ngpus = psb_cuda_getDeviceCount()
|
||||
\end{minted}
|
||||
\else
|
||||
\begin{center}
|
||||
\begin{minipage}[tl]{0.9\textwidth}
|
||||
\begin{verbatim}
|
||||
ngpus = psb_cuda_getDeviceCount()
|
||||
\end{verbatim}
|
||||
\end{minipage}
|
||||
\end{center}
|
||||
\fi
|
||||
|
||||
Get number of devices available on current computing node.
|
||||
|
||||
\subsection*{psb\_cuda\_getDevice }
|
||||
\addcontentsline{toc}{subsection}{psb\_cuda\_getDevice}
|
||||
|
||||
\ifpdf
|
||||
\begin{minted}[breaklines=true]{fortran}
|
||||
ngpus = psb_cuda_getDevice()
|
||||
\end{minted}
|
||||
\else
|
||||
\begin{center}
|
||||
\begin{minipage}[tl]{0.9\textwidth}
|
||||
\begin{verbatim}
|
||||
ngpus = psb_cuda_getDevice()
|
||||
\end{verbatim}
|
||||
\end{minipage}
|
||||
\end{center}
|
||||
\fi
|
||||
|
||||
Get device in use by current process.
|
||||
|
||||
\subsection*{psb\_cuda\_setDevice }
|
||||
\addcontentsline{toc}{subsection}{psb\_cuda\_setDevice}
|
||||
|
||||
\ifpdf
|
||||
\begin{minted}[breaklines=true]{fortran}
|
||||
info = psb_cuda_setDevice(dev)
|
||||
\end{minted}
|
||||
\else
|
||||
\begin{center}
|
||||
\begin{minipage}[tl]{0.9\textwidth}
|
||||
\begin{verbatim}
|
||||
info = psb_cuda_setDevice(dev)
|
||||
\end{verbatim}
|
||||
\end{minipage}
|
||||
\end{center}
|
||||
\fi
|
||||
|
||||
Set device to be used by current process.
|
||||
|
||||
\subsection*{psb\_cuda\_DeviceHasUVA }
|
||||
\addcontentsline{toc}{subsection}{psb\_cuda\_DeviceHasUVA}
|
||||
|
||||
\ifpdf
|
||||
\begin{minted}[breaklines=true]{fortran}
|
||||
hasUva = psb_cuda_DeviceHasUVA()
|
||||
\end{minted}
|
||||
\else
|
||||
\begin{center}
|
||||
\begin{minipage}[tl]{0.9\textwidth}
|
||||
\begin{verbatim}
|
||||
hasUva = psb_cuda_DeviceHasUVA()
|
||||
\end{verbatim}
|
||||
\end{minipage}
|
||||
\end{center}
|
||||
\fi
|
||||
|
||||
Returns true if device currently in use supports UVA
|
||||
(Unified Virtual Addressing).
|
||||
|
||||
\subsection*{psb\_cuda\_WarpSize }
|
||||
\addcontentsline{toc}{subsection}{psb\_cuda\_WarpSize}
|
||||
|
||||
\ifpdf
|
||||
\begin{minted}[breaklines=true]{fortran}
|
||||
nw = psb_cuda_WarpSize()
|
||||
\end{minted}
|
||||
\else
|
||||
\begin{center}
|
||||
\begin{minipage}[tl]{0.9\textwidth}
|
||||
\begin{verbatim}
|
||||
nw = psb_cuda_WarpSize()
|
||||
\end{verbatim}
|
||||
\end{minipage}
|
||||
\end{center}
|
||||
\fi
|
||||
|
||||
Returns the warp size.
|
||||
|
||||
|
||||
\subsection*{psb\_cuda\_MultiProcessors }
|
||||
\addcontentsline{toc}{subsection}{psb\_cuda\_MultiProcessors}
|
||||
|
||||
\ifpdf
|
||||
\begin{minted}[breaklines=true]{fortran}
|
||||
nmp = psb_cuda_MultiProcessors()
|
||||
\end{minted}
|
||||
\else
|
||||
\begin{center}
|
||||
\begin{minipage}[tl]{0.9\textwidth}
|
||||
\begin{verbatim}
|
||||
nmp = psb_cuda_MultiProcessors()
|
||||
\end{verbatim}
|
||||
\end{minipage}
|
||||
\end{center}
|
||||
\fi
|
||||
|
||||
Returns the number of multiprocessors in the CUDA device.
|
||||
|
||||
\subsection*{psb\_cuda\_MaxThreadsPerMP }
|
||||
\addcontentsline{toc}{subsection}{psb\_cuda\_MaxThreadsPerMP}
|
||||
|
||||
\ifpdf
|
||||
\begin{minted}[breaklines=true]{fortran}
|
||||
nt = psb_cuda_MaxThreadsPerMP()
|
||||
\end{minted}
|
||||
\else
|
||||
\begin{center}
|
||||
\begin{minipage}[tl]{0.9\textwidth}
|
||||
\begin{verbatim}
|
||||
nt = psb_cuda_MaxThreadsPerMP()
|
||||
\end{verbatim}
|
||||
\end{minipage}
|
||||
\end{center}
|
||||
\fi
|
||||
|
||||
Returns the maximum number of threads per multiprocessor.
|
||||
|
||||
|
||||
\subsection*{psb\_cuda\_MaxRegistersPerBlock }
|
||||
\addcontentsline{toc}{subsection}{psb\_cuda\_MaxRegisterPerBlock}
|
||||
|
||||
\ifpdf
|
||||
\begin{minted}[breaklines=true]{fortran}
|
||||
nr = psb_cuda_MaxRegistersPerBlock()
|
||||
\end{minted}
|
||||
\else
|
||||
\begin{center}
|
||||
\begin{minipage}[tl]{0.9\textwidth}
|
||||
\begin{verbatim}
|
||||
nr = psb_cuda_MaxRegistersPerBlock()
|
||||
\end{verbatim}
|
||||
\end{minipage}
|
||||
\end{center}
|
||||
\fi
|
||||
|
||||
Returns the maximum number of register per thread block.
|
||||
|
||||
|
||||
\subsection*{psb\_cuda\_MemoryClockRate }
|
||||
\addcontentsline{toc}{subsection}{psb\_cuda\_MemoryClockRate}
|
||||
|
||||
\ifpdf
|
||||
\begin{minted}[breaklines=true]{fortran}
|
||||
cl = psb_cuda_MemoryClockRate()
|
||||
\end{minted}
|
||||
\else
|
||||
\begin{center}
|
||||
\begin{minipage}[tl]{0.9\textwidth}
|
||||
\begin{verbatim}
|
||||
cl = psb_cuda_MemoryClockRate()
|
||||
\end{verbatim}
|
||||
\end{minipage}
|
||||
\end{center}
|
||||
\fi
|
||||
|
||||
Returns the memory clock rate in KHz, as an integer.
|
||||
|
||||
\subsection*{psb\_cuda\_MemoryBusWidth }
|
||||
\addcontentsline{toc}{subsection}{psb\_cuda\_MemoryBusWidth}
|
||||
|
||||
\ifpdf
|
||||
\begin{minted}[breaklines=true]{fortran}
|
||||
nb = psb_cuda_MemoryBusWidth()
|
||||
\end{minted}
|
||||
\else
|
||||
\begin{center}
|
||||
\begin{minipage}[tl]{0.9\textwidth}
|
||||
\begin{verbatim}
|
||||
nb = psb_cuda_MemoryBusWidth()
|
||||
\end{verbatim}
|
||||
\end{minipage}
|
||||
\end{center}
|
||||
\fi
|
||||
|
||||
Returns the memory bus width in bits.
|
||||
|
||||
\subsection*{psb\_cuda\_MemoryPeakBandwidth }
|
||||
\addcontentsline{toc}{subsection}{psb\_cuda\_MemoryPeakBandwidth}
|
||||
|
||||
\ifpdf
|
||||
\begin{minted}[breaklines=true]{fortran}
|
||||
bw = psb_cuda_MemoryPeakBandwidth()
|
||||
\end{minted}
|
||||
\else
|
||||
\begin{center}
|
||||
\begin{minipage}[tl]{0.9\textwidth}
|
||||
\begin{verbatim}
|
||||
bw = psb_cuda_MemoryPeakBandwidth()
|
||||
\end{verbatim}
|
||||
\end{minipage}
|
||||
\end{center}
|
||||
\fi
|
||||
Returns the peak memory bandwidth in MB/s (real double precision).
|
||||
|
||||
|
||||
|
||||
@ -1,598 +0,0 @@
|
||||
\section{Extensions}\label{sec:ext-intro}
|
||||
|
||||
The EXT, CUDA and RSB subdirectories contains a set of extensions to the base
|
||||
library. The extensions provide additional storage formats beyond the
|
||||
ones already contained in the base library, as well as interfaces
|
||||
to:
|
||||
\begin{description}
|
||||
\item[SPGPU] a CUDA library originally published as
|
||||
\url{https://code.google.com/p/spgpu/} and now included in the
|
||||
\verb|cuda| subdir, for computations on NVIDIA GPUs;
|
||||
\item[LIBRSB] \url{http://sourceforge.net/projects/librsb/}, for
|
||||
computations on multicore parallel machines.
|
||||
\end{description}
|
||||
The infrastructure laid out in the base library to allow for these
|
||||
extensions is detailed in the references~\cite{DesPat:11,CaFiRo:2014,Sparse03};
|
||||
the CUDA-specific data formats are described in~\cite{OurTechRep}.
|
||||
|
||||
|
||||
\subsection{Using the extensions}
|
||||
\label{sec:ext-appstruct}
|
||||
A sample application using the PSBLAS extensions will contain the
|
||||
following steps:
|
||||
\begin{itemize}
|
||||
\item \verb|USE| the appropriat modules (\verb|psb_ext_mod|,
|
||||
\verb|psb_cuda_mod|);
|
||||
\item Declare a \emph{mold} variable of the necessary type
|
||||
(e.g. \verb|psb_d_ell_sparse_mat|, \verb|psb_d_hlg_sparse_mat|,
|
||||
\verb|psb_d_vect_cuda|);
|
||||
\item Pass the mold variable to the base library interface where
|
||||
needed to ensure the appropriate dynamic type.
|
||||
\end{itemize}
|
||||
Suppose you want to use the CUDA-enabled ELLPACK data structure; you
|
||||
would use a piece of code like this (and don't forget, you need
|
||||
CUDA-side vectors along with the matrices):
|
||||
\ifpdf
|
||||
\begin{minted}[breaklines=true,bgcolor=bg,fontsize=\small]{fortran}
|
||||
program my_cuda_test
|
||||
use psb_base_mod
|
||||
use psb_util_mod
|
||||
use psb_ext_mod
|
||||
use psb_cuda_mod
|
||||
type(psb_dspmat_type) :: a, agpu
|
||||
type(psb_d_vect_type) :: x, xg, bg
|
||||
|
||||
real(psb_dpk_), allocatable :: xtmp(:)
|
||||
type(psb_d_vect_cuda) :: vmold
|
||||
type(psb_d_elg_sparse_mat) :: aelg
|
||||
type(psb_ctxt_type) :: ctxt
|
||||
integer :: iam, np
|
||||
|
||||
|
||||
call psb_init(ctxt)
|
||||
call psb_info(ctxt,iam,np)
|
||||
call psb_cuda_init(ctxt, iam)
|
||||
|
||||
|
||||
! My own home-grown matrix generator
|
||||
call gen_matrix(ctxt,idim,desc_a,a,x,info)
|
||||
if (info /= 0) goto 9999
|
||||
|
||||
call a%cscnv(agpu,info,mold=aelg)
|
||||
if (info /= 0) goto 9999
|
||||
xtmp = x%get_vect()
|
||||
call xg%bld(xtmp,mold=vmold)
|
||||
call bg%bld(size(xtmp),mold=vmold)
|
||||
|
||||
! Do sparse MV
|
||||
call psb_spmm(done,agpu,xg,dzero,bg,desc_a,info)
|
||||
|
||||
|
||||
9999 continue
|
||||
if (info == 0) then
|
||||
write(*,*) '42'
|
||||
else
|
||||
write(*,*) 'Something went wrong ',info
|
||||
end if
|
||||
|
||||
|
||||
call psb_cuda_exit()
|
||||
call psb_exit(ctxt)
|
||||
stop
|
||||
end program my_cuda_test
|
||||
\end{minted}
|
||||
\else
|
||||
\begin{center}
|
||||
\begin{minipage}[tl]{0.9\textwidth}
|
||||
\begin{verbatim}
|
||||
program my_cuda_test
|
||||
use psb_base_mod
|
||||
use psb_util_mod
|
||||
use psb_ext_mod
|
||||
use psb_cuda_mod
|
||||
type(psb_dspmat_type) :: a, agpu
|
||||
type(psb_d_vect_type) :: x, xg, bg
|
||||
|
||||
real(psb_dpk_), allocatable :: xtmp(:)
|
||||
type(psb_d_vect_cuda) :: vmold
|
||||
type(psb_d_elg_sparse_mat) :: aelg
|
||||
type(psb_ctxt_type) :: ctxt
|
||||
integer :: iam, np
|
||||
|
||||
|
||||
call psb_init(ctxt)
|
||||
call psb_info(ctxt,iam,np)
|
||||
call psb_cuda_init(ctxt, iam)
|
||||
|
||||
|
||||
! My own home-grown matrix generator
|
||||
call gen_matrix(ctxt,idim,desc_a,a,x,info)
|
||||
if (info /= 0) goto 9999
|
||||
|
||||
call a%cscnv(agpu,info,mold=aelg)
|
||||
if (info /= 0) goto 9999
|
||||
xtmp = x%get_vect()
|
||||
call xg%bld(xtmp,mold=vmold)
|
||||
call bg%bld(size(xtmp),mold=vmold)
|
||||
|
||||
! Do sparse MV
|
||||
call psb_spmm(done,agpu,xg,dzero,bg,desc_a,info)
|
||||
|
||||
|
||||
9999 continue
|
||||
if (info == 0) then
|
||||
write(*,*) '42'
|
||||
else
|
||||
write(*,*) 'Something went wrong ',info
|
||||
end if
|
||||
|
||||
|
||||
call psb_cuda_exit()
|
||||
call psb_exit(ctxt)
|
||||
stop
|
||||
end program my_cuda_test
|
||||
\end{verbatim}
|
||||
\end{minipage}
|
||||
\end{center}
|
||||
\fi
|
||||
|
||||
A full example of this strategy can be seen in the
|
||||
\texttt{test/ext/kernel} and \texttt{test/\-cuda/\-kernel} subdirectories,
|
||||
where we provide sample programs
|
||||
to test the speed of the sparse matrix-vector product with the various
|
||||
data structures included in the library.
|
||||
|
||||
|
||||
\subsection{Extensions' Data Structures}
|
||||
\label{sec:ext-datastruct}
|
||||
%\ifthenelse{\boolean{mtc}}{\minitoc}{}
|
||||
|
||||
Access to the facilities provided by the EXT library is mainly
|
||||
achieved through the data types that are provided within.
|
||||
The data classes are derived from the base classes in PSBLAS, through
|
||||
the Fortran~2003 mechanism of \emph{type extension}~\cite{MRC:11}.
|
||||
|
||||
The data classes are divided between the general purpose CPU
|
||||
extensions, the GPU interfaces and the RSB interfaces.
|
||||
In the description we will make use of the notation introduced in
|
||||
Table~\ref{tab:notation}.
|
||||
|
||||
\begin{table}[ht]
|
||||
\caption{Notation for parameters describing a sparse matrix}
|
||||
\begin{center}
|
||||
{\footnotesize
|
||||
\begin{tabular}{ll}
|
||||
\hline
|
||||
Name & Description \\
|
||||
\hline
|
||||
M & Number of rows in matrix \\
|
||||
N & Number of columns in matrix \\
|
||||
NZ & Number of nonzeros in matrix \\
|
||||
AVGNZR & Average number of nonzeros per row \\
|
||||
MAXNZR & Maximum number of nonzeros per row \\
|
||||
NDIAG & Numero of nonzero diagonals\\
|
||||
AS & Coefficients array \\
|
||||
IA & Row indices array \\
|
||||
JA & Column indices array \\
|
||||
IRP & Row start pointers array \\
|
||||
JCP & Column start pointers array \\
|
||||
NZR & Number of nonzeros per row array \\
|
||||
OFFSET & Offset for diagonals \\
|
||||
\hline
|
||||
\end{tabular}
|
||||
}
|
||||
\end{center}
|
||||
\label{tab:notation}
|
||||
\end{table}
|
||||
|
||||
\begin{figure}[ht]
|
||||
\centering
|
||||
% \includegraphics[width=5.2cm]{figures/mat.eps}
|
||||
\ifcase\pdfoutput
|
||||
\includegraphics[width=5.2cm]{mat.png}
|
||||
\or
|
||||
\includegraphics[width=5.2cm]{figures/mat.pdf}
|
||||
\fi
|
||||
\caption{Example of sparse matrix}
|
||||
\label{fig:dense}
|
||||
\end{figure}
|
||||
|
||||
\subsection{CPU-class extensions}
|
||||
|
||||
|
||||
\subsubsection*{ELLPACK}
|
||||
|
||||
The ELLPACK/ITPACK format (shown in Figure~\ref{fig:ell})
|
||||
comprises two 2-dimensional arrays \verb|AS| and
|
||||
\verb|JA| with \verb|M| rows and \verb|MAXNZR| columns, where
|
||||
\verb|MAXNZR| is the maximum
|
||||
number of nonzeros in any row~\cite{ELLPACK}.
|
||||
Each row of the arrays \verb|AS| and \verb|JA| contains the
|
||||
coefficients and column indices; rows shorter than
|
||||
\verb|MAXNZR| are padded with zero coefficients and appropriate column
|
||||
indices, e.g. the last valid one found in the same row.
|
||||
|
||||
\begin{figure}[ht]
|
||||
\centering
|
||||
% \includegraphics[width=8.2cm]{figures/ell.eps}
|
||||
\ifcase\pdfoutput
|
||||
\includegraphics[width=8.2cm]{ell.png}
|
||||
\or
|
||||
\includegraphics[width=8.2cm]{figures/ell.pdf}
|
||||
\fi
|
||||
\caption{ELLPACK compression of matrix in Figure~\ref{fig:dense}}
|
||||
\label{fig:ell}
|
||||
\end{figure}
|
||||
|
||||
|
||||
\begin{algorithm}
|
||||
\lstset{language=Fortran}
|
||||
\small
|
||||
\begin{lstlisting}
|
||||
do i=1,n
|
||||
t=0
|
||||
do j=1,maxnzr
|
||||
t = t + as(i,j)*x(ja(i,j))
|
||||
end do
|
||||
y(i) = t
|
||||
end do
|
||||
\end{lstlisting}
|
||||
\caption{\label{alg:ell} Matrix-Vector product in ELL format}
|
||||
\end{algorithm}
|
||||
The matrix-vector product $y=Ax$ can be computed with the code shown in
|
||||
Alg.~\ref{alg:ell}; it costs one memory write per outer iteration,
|
||||
plus three memory reads and two floating-point operations per inner
|
||||
iteration.
|
||||
|
||||
Unless all rows have exactly the same number of nonzeros, some of the
|
||||
coefficients in the \verb|AS| array will be zeros; therefore this
|
||||
data structure will have an overhead both in terms of memory space
|
||||
and redundant operations (multiplications by zero). The overhead can
|
||||
be acceptable if:
|
||||
\begin{enumerate}
|
||||
\item The maximum number of nonzeros per row is not much larger than
|
||||
the average;
|
||||
\item The regularity of the data structure allows for faster code,
|
||||
e.g. by allowing vectorization, thereby offsetting the additional
|
||||
storage requirements.
|
||||
\end{enumerate}
|
||||
In the extreme case where the input matrix has one full row, the
|
||||
ELLPACK structure would require more memory than the normal 2D array
|
||||
storage. The ELLPACK storage format was very popular in the vector
|
||||
computing days; in modern CPUs it is not quite as popular, but it
|
||||
is the basis for many GPU formats.
|
||||
|
||||
The relevant data type is \verb|psb_T_ell_sparse_mat|:
|
||||
\ifpdf
|
||||
\begin{minted}[breaklines=true,bgcolor=bg,fontsize=\small]{fortran}
|
||||
type, extends(psb_d_base_sparse_mat) :: psb_d_ell_sparse_mat
|
||||
!
|
||||
! ITPACK/ELL format, extended.
|
||||
!
|
||||
|
||||
integer(psb_ipk_), allocatable :: irn(:), ja(:,:), idiag(:)
|
||||
real(psb_dpk_), allocatable :: val(:,:)
|
||||
|
||||
contains
|
||||
....
|
||||
end type psb_d_ell_sparse_mat
|
||||
\end{minted}
|
||||
\else
|
||||
\begin{center}
|
||||
\begin{minipage}[tl]{0.9\textwidth}
|
||||
\begin{verbatim}
|
||||
type, extends(psb_d_base_sparse_mat) :: psb_d_ell_sparse_mat
|
||||
!
|
||||
! ITPACK/ELL format, extended.
|
||||
!
|
||||
|
||||
integer(psb_ipk_), allocatable :: irn(:), ja(:,:), idiag(:)
|
||||
real(psb_dpk_), allocatable :: val(:,:)
|
||||
|
||||
contains
|
||||
....
|
||||
end type psb_d_ell_sparse_mat
|
||||
\end{verbatim}
|
||||
\end{minipage}
|
||||
\end{center}
|
||||
\fi
|
||||
|
||||
|
||||
\subsubsection*{Hacked ELLPACK}
|
||||
|
||||
The \textit{hacked ELLPACK} (\textbf{HLL}) format
|
||||
alleviates the main problem of the ELLPACK format, that is,
|
||||
the amount of memory required by padding for sparse matrices in
|
||||
which the maximum row length is larger than the average.
|
||||
|
||||
The number of elements allocated to padding is $[(m*maxNR) -
|
||||
(m*avgNR) = m*(maxNR-avgNR)]$
|
||||
for both \verb|AS| and \verb|JA| arrays,
|
||||
where $m$ is equal to the number of rows of the matrix, $maxNR$ is the
|
||||
maximum number of nonzero elements
|
||||
in every row and $avgNR$ is the average number of nonzeros.
|
||||
Therefore a single densely populated row can seriously affect the
|
||||
total size of the allocation.
|
||||
|
||||
To limit this effect, in the HLL format we break the original matrix
|
||||
into equally sized groups of rows (called \textit{hacks}), and then store
|
||||
these groups as independent matrices in ELLPACK format.
|
||||
The groups can be arranged selecting rows in an arbitrarily manner;
|
||||
indeed, if the rows are sorted by decreasing number of nonzeros we
|
||||
obtain essentially the JAgged Diagonals format.
|
||||
If the rows are not in the original order, then an additional vector
|
||||
\textit{rIdx} is required, storing the actual row index for each row
|
||||
in the data structure.
|
||||
|
||||
The multiple ELLPACK-like buffers are stacked together inside a
|
||||
single, one dimensional array;
|
||||
an additional vector \textit{hackOffsets} is provided to keep track
|
||||
of the individual submatrices.
|
||||
All hacks have the same number of rows \textit{hackSize}; hence,
|
||||
the \textit{hackOffsets} vector is an array of
|
||||
$(m/hackSize)+1$ elements, each one pointing to the first index of a
|
||||
submatrix inside the stacked \textit{cM}/\textit{rP} buffers, plus an
|
||||
additional element pointing past the end of the last block, where the
|
||||
next one would begin.
|
||||
We thus have the property that
|
||||
the elements of the $k$-th \textit{hack} are stored between
|
||||
\verb|hackOffsets[k]| and
|
||||
\verb|hackOffsets[k+1]|, similarly to what happens in the CSR format.
|
||||
|
||||
\begin{figure}[ht]
|
||||
\centering
|
||||
% \includegraphics[width=8.2cm]{../figures/hll.eps}
|
||||
\ifcase\pdfoutput
|
||||
\includegraphics[width=.72\textwidth]{hll.png}
|
||||
\or
|
||||
\includegraphics[width=.72\textwidth]{../figures/hll.pdf}
|
||||
\fi
|
||||
\caption{Hacked ELLPACK compression of matrix in Figure~\ref{fig:dense}}
|
||||
\label{fig:hll}
|
||||
\end{figure}
|
||||
|
||||
With this data structure a very long row only affects one hack, and
|
||||
therefore the additional memory is limited to the hack in which the
|
||||
row appears.
|
||||
|
||||
The relevant data type is \verb|psb_T_hll_sparse_mat|:
|
||||
\ifpdf
|
||||
\begin{minted}[breaklines=true,bgcolor=bg,fontsize=\small]{fortran}
|
||||
type, extends(psb_d_base_sparse_mat) :: psb_d_hll_sparse_mat
|
||||
!
|
||||
! HLL format. (Hacked ELL)
|
||||
!
|
||||
integer(psb_ipk_) :: hksz
|
||||
integer(psb_ipk_), allocatable :: irn(:), ja(:), idiag(:), hkoffs(:)
|
||||
real(psb_dpk_), allocatable :: val(:)
|
||||
|
||||
contains
|
||||
....
|
||||
end type
|
||||
\end{minted}
|
||||
\else
|
||||
\begin{center}
|
||||
\begin{minipage}[tl]{0.9\textwidth}
|
||||
\begin{verbatim}
|
||||
type, extends(psb_d_base_sparse_mat) :: psb_d_hll_sparse_mat
|
||||
!
|
||||
! HLL format. (Hacked ELL)
|
||||
!
|
||||
integer(psb_ipk_) :: hksz
|
||||
integer(psb_ipk_), allocatable :: irn(:), ja(:), idiag(:), hkoffs(:)
|
||||
real(psb_dpk_), allocatable :: val(:)
|
||||
|
||||
contains
|
||||
....
|
||||
end type
|
||||
\end{verbatim}
|
||||
\end{minipage}
|
||||
\end{center}
|
||||
\fi
|
||||
|
||||
\subsubsection*{Diagonal storage}
|
||||
|
||||
|
||||
The DIAgonal (DIA) format (shown in Figure~\ref{fig:dia})
|
||||
has a 2-dimensional array \verb|AS| containing in each column the
|
||||
coefficients along a diagonal of the matrix, and an integer array
|
||||
\verb|OFFSET| that determines where each diagonal starts. The
|
||||
diagonals in \verb|AS| are padded with zeros as necessary.
|
||||
|
||||
The code to compute the matrix-vector product $y=Ax$ is shown in Alg.~\ref{alg:dia};
|
||||
it costs one memory read per outer iteration,
|
||||
plus three memory reads, one memory write and two floating-point
|
||||
operations per inner iteration. The accesses to \verb|AS| and
|
||||
\verb|x| are in strict sequential order, therefore no indirect
|
||||
addressing is required.
|
||||
|
||||
\begin{figure}[ht]
|
||||
\centering
|
||||
% \includegraphics[width=8.2cm]{figures/dia.eps}
|
||||
\ifcase\pdfoutput
|
||||
\includegraphics[width=.72\textwidth]{dia.png}
|
||||
\or
|
||||
\includegraphics[width=.72\textwidth]{figures/dia.pdf}
|
||||
\fi
|
||||
\caption{DIA compression of matrix in Figure~\ref{fig:dense}}
|
||||
\label{fig:dia}
|
||||
\end{figure}
|
||||
|
||||
|
||||
\begin{algorithm}
|
||||
\ifpdf
|
||||
\begin{minted}[breaklines=true,bgcolor=bg,fontsize=\small]{fortran}
|
||||
do j=1,ndiag
|
||||
if (offset(j) > 0) then
|
||||
ir1 = 1; ir2 = m - offset(j);
|
||||
else
|
||||
ir1 = 1 - offset(j); ir2 = m;
|
||||
end if
|
||||
do i=ir1,ir2
|
||||
y(i) = y(i) + alpha*as(i,j)*x(i+offset(j))
|
||||
end do
|
||||
end do
|
||||
\end{minted}
|
||||
\else
|
||||
\begin{center}
|
||||
\begin{minipage}[tl]{0.9\textwidth}
|
||||
\begin{verbatim}
|
||||
do j=1,ndiag
|
||||
if (offset(j) > 0) then
|
||||
ir1 = 1; ir2 = m - offset(j);
|
||||
else
|
||||
ir1 = 1 - offset(j); ir2 = m;
|
||||
end if
|
||||
do i=ir1,ir2
|
||||
y(i) = y(i) + alpha*as(i,j)*x(i+offset(j))
|
||||
end do
|
||||
end do
|
||||
\end{verbatim}
|
||||
\end{minipage}
|
||||
\end{center}
|
||||
\fi
|
||||
\caption{\label{alg:dia} Matrix-Vector product in DIA format}
|
||||
\end{algorithm}
|
||||
|
||||
|
||||
The relevant data type is \verb|psb_T_dia_sparse_mat|:
|
||||
\ifpdf
|
||||
\begin{minted}[breaklines=true,bgcolor=bg,fontsize=\small]{fortran}
|
||||
type, extends(psb_d_base_sparse_mat) :: psb_d_dia_sparse_mat
|
||||
!
|
||||
! DIA format, extended.
|
||||
!
|
||||
|
||||
integer(psb_ipk_), allocatable :: offset(:)
|
||||
integer(psb_ipk_) :: nzeros
|
||||
real(psb_dpk_), allocatable :: data(:,:)
|
||||
|
||||
end type
|
||||
\end{minted}
|
||||
\else
|
||||
\begin{center}
|
||||
\begin{minipage}[tl]{0.9\textwidth}
|
||||
\begin{verbatim}
|
||||
type, extends(psb_d_base_sparse_mat) :: psb_d_dia_sparse_mat
|
||||
!
|
||||
! DIA format, extended.
|
||||
!
|
||||
|
||||
integer(psb_ipk_), allocatable :: offset(:)
|
||||
integer(psb_ipk_) :: nzeros
|
||||
real(psb_dpk_), allocatable :: data(:,:)
|
||||
|
||||
end type
|
||||
\end{verbatim}
|
||||
\end{minipage}
|
||||
\end{center}
|
||||
\fi
|
||||
|
||||
|
||||
|
||||
\subsubsection*{Hacked DIA}
|
||||
|
||||
Storage by DIAgonals is an attractive option for matrices whose
|
||||
coefficients are located on a small set of diagonals, since they do
|
||||
away with storing explicitly the indices and therefore reduce
|
||||
significantly memory traffic. However, having a few coefficients
|
||||
outside of the main set of diagonals may significantly increase the
|
||||
amount of needed padding; moreover, while the DIA code is easily
|
||||
vectorized, it does not necessarily make optimal use of the memory
|
||||
hierarchy. While processing each diagonal we are updating entries in
|
||||
the output vector \verb|y|, which is then accessed multiple times; if
|
||||
the vector \verb|y| is too large to remain in the cache memory, the
|
||||
associated cache miss penalty is paid multiple times.
|
||||
|
||||
The \textit{hacked DIA} (\textbf{HDIA}) format was designed to contain
|
||||
the amount of padding, by breaking the original matrix
|
||||
into equally sized groups of rows (\textit{hacks}), and then storing
|
||||
these groups as independent matrices in DIA format. This approach is
|
||||
similar to that of HLL, and requires using an offset vector for each
|
||||
submatrix. Again, similarly to HLL, the various submatrices are
|
||||
stacked inside a linear array to improve memory management. The fact
|
||||
that the matrix is accessed in slices helps in reducing cache misses,
|
||||
especially regarding accesses to the %output
|
||||
vector \verb|y|.
|
||||
|
||||
|
||||
An additional vector \textit{hackOffsets} is provided to complete
|
||||
the matrix format; given that \textit{hackSize} is the number of rows of each hack,
|
||||
the \textit{hackOffsets} vector is made by an array of
|
||||
$(m/hackSize)+1$ elements, pointing to the first diagonal offset of a
|
||||
submatrix inside the stacked \textit{offsets} buffers, plus an
|
||||
additional element equal to the number of nonzero diagonals in the whole matrix.
|
||||
We thus have the property that
|
||||
the number of diagonals of the $k$-th \textit{hack} is given by
|
||||
\textit{hackOffsets[k+1] - hackOffsets[k]}.
|
||||
|
||||
\begin{figure}[ht]
|
||||
\centering
|
||||
% \includegraphics[width=8.2cm]{../figures/hdia.eps}
|
||||
\ifcase\pdfoutput
|
||||
\includegraphics[width=.72\textwidth]{hdia.png}
|
||||
\or
|
||||
\includegraphics[width=.72\textwidth]{../figures/hdia.pdf}
|
||||
\fi
|
||||
\caption{Hacked DIA compression of matrix in Figure~\ref{fig:dense}}
|
||||
\label{fig:hdia}
|
||||
\end{figure}
|
||||
|
||||
The relevant data type is \verb|psb_T_hdia_sparse_mat|:
|
||||
\ifpdf
|
||||
\begin{minted}[breaklines=true,bgcolor=bg,fontsize=\small]{fortran}
|
||||
type pm
|
||||
real(psb_dpk_), allocatable :: data(:,:)
|
||||
end type pm
|
||||
|
||||
type po
|
||||
integer(psb_ipk_), allocatable :: off(:)
|
||||
end type po
|
||||
|
||||
type, extends(psb_d_base_sparse_mat) :: psb_d_hdia_sparse_mat
|
||||
!
|
||||
! HDIA format, extended.
|
||||
!
|
||||
|
||||
type(pm), allocatable :: hdia(:)
|
||||
type(po), allocatable :: offset(:)
|
||||
integer(psb_ipk_) :: nblocks, nzeros
|
||||
integer(psb_ipk_) :: hack = 64
|
||||
integer(psb_long_int_k_) :: dim=0
|
||||
|
||||
contains
|
||||
....
|
||||
end type
|
||||
\end{minted}
|
||||
\else
|
||||
\begin{center}
|
||||
\begin{minipage}[tl]{0.9\textwidth}
|
||||
\begin{verbatim}
|
||||
type pm
|
||||
real(psb_dpk_), allocatable :: data(:,:)
|
||||
end type pm
|
||||
|
||||
type po
|
||||
integer(psb_ipk_), allocatable :: off(:)
|
||||
end type po
|
||||
|
||||
type, extends(psb_d_base_sparse_mat) :: psb_d_hdia_sparse_mat
|
||||
!
|
||||
! HDIA format, extended.
|
||||
!
|
||||
|
||||
type(pm), allocatable :: hdia(:)
|
||||
type(po), allocatable :: offset(:)
|
||||
integer(psb_ipk_) :: nblocks, nzeros
|
||||
integer(psb_ipk_) :: hack = 64
|
||||
integer(psb_long_int_k_) :: dim=0
|
||||
|
||||
contains
|
||||
....
|
||||
end type
|
||||
\end{verbatim}
|
||||
\end{minipage}
|
||||
\end{center}
|
||||
\fi
|
||||
|
||||
|
||||
Binary file not shown.
Binary file not shown.
|
Before Width: | Height: | Size: 50 KiB |
Binary file not shown.
Binary file not shown.
|
Before Width: | Height: | Size: 52 KiB |
Binary file not shown.
Binary file not shown.
|
Before Width: | Height: | Size: 58 KiB |
Binary file not shown.
Binary file not shown.
|
Before Width: | Height: | Size: 61 KiB |
Binary file not shown.
Binary file not shown.
|
Before Width: | Height: | Size: 90 KiB |
Binary file not shown.
|
Before Width: | Height: | Size: 29 KiB |
@ -1 +0,0 @@
|
||||
tmp/userguide.pdf
|
||||
@ -1,53 +0,0 @@
|
||||
include ../Make.inc
|
||||
#
|
||||
# Libraries used
|
||||
#
|
||||
PSBLIBDIR=$(PSBLASDIR)/lib/
|
||||
PSBINCDIR=$(PSBLASDIR)/include
|
||||
PSBMODDIR=$(PSBLASDIR)/modules
|
||||
LIBDIR=../lib
|
||||
INCDIR=../include
|
||||
MODDIR=../modules
|
||||
PSBLAS_LIB= -L$(PSBLIBDIR) -lpsb_util -lpsb_base
|
||||
#-lpsb_util -lpsb_krylov -lpsb_prec -lpsb_base
|
||||
LDLIBS=$(PSBLDLIBS)
|
||||
#
|
||||
# Compilers and such
|
||||
#
|
||||
#CCOPT= -g
|
||||
FINCLUDES=$(FMFLAG). $(FMFLAG)$(PSBMODDIR) $(FMFLAG)$(PSBINCDIR) $(FIFLAG). $(LIBRSB_INCLUDES) $(LIBRSB_DEFINES)
|
||||
CINCLUDES=-I$(GPU_INCDIR) -I$(CUDA_INCDIR)
|
||||
LIBNAME=libpsb_rsb.a
|
||||
|
||||
|
||||
FOBJS= rsb_mod.o psb_d_rsb_mat_mod.o \
|
||||
psb_rsb_penv_mod.o psb_rsb_mod.o
|
||||
|
||||
COBJS= rsb_int.o
|
||||
|
||||
OBJS=$(COBJS) $(FOBJS)
|
||||
|
||||
lib: objs ilib
|
||||
/bin/cp -p $(LIBNAME) $(LIBDIR)
|
||||
|
||||
objs: $(OBJS) iobjs
|
||||
/bin/cp -p *$(.mod) $(MODDIR)
|
||||
|
||||
iobjs:
|
||||
$(MAKE) -C impl objs
|
||||
ilib: iobjs
|
||||
$(MAKE) -C impl lib LIBNAME=$(LIBNAME)
|
||||
|
||||
clean: cclean iclean
|
||||
/bin/rm -f $(FOBJS) *$(.mod) *.a
|
||||
|
||||
cclean:
|
||||
/bin/rm -f $(COBJS)
|
||||
iclean:
|
||||
cd impl && $(MAKE) clean
|
||||
|
||||
verycleanlib:
|
||||
(cd ../..; make veryclean)
|
||||
|
||||
|
||||
|
||||
@ -1,30 +0,0 @@
|
||||
include ../../Make.inc
|
||||
PSBLIBDIR=$(PSBLASDIR)/lib/
|
||||
PSBINCDIR=$(PSBLASDIR)/include
|
||||
PSBMODDIR=$(PSBLASDIR)/modules
|
||||
LIBDIR=../../lib
|
||||
INCDIR=../../include
|
||||
MODDIR=../../modules
|
||||
PSBLAS_LIB= -L$(PSBLIBDIR) -lpsb_util -lpsb_base
|
||||
#-lpsb_util -lpsb_krylov -lpsb_prec -lpsb_base
|
||||
LDLIBS=$(PSBLDLIBS)
|
||||
#
|
||||
# Compilers and such
|
||||
#
|
||||
#CCOPT= -g
|
||||
FINCLUDES=$(FMFLAG).. $(FMFLAG)$(INCDIR) $(FMFLAG)$(MODDIR) $(FMFLAG)$(PSBMODDIR) $(FMFLAG)$(PSBINCDIR) $(LIBRSB_INCLUDES) $(FIFLAG).. $(LIBRSB_DEFINES)
|
||||
CINCLUDES=
|
||||
LIBNAME=libpsb_rsb.a
|
||||
|
||||
OBJS= \
|
||||
psb_d_cp_rsb_from_coo.o \
|
||||
psb_d_mv_rsb_from_coo.o \
|
||||
psb_d_cp_rsb_to_coo.o psb_d_rsb_csmv.o
|
||||
|
||||
objs: $(OBJS)
|
||||
|
||||
lib: objs
|
||||
ar cur ../$(LIBNAME) $(OBJS)
|
||||
|
||||
clean:
|
||||
/bin/rm -f $(OBJS)
|
||||
@ -1,78 +0,0 @@
|
||||
! Parallel Sparse BLAS GPU plugin
|
||||
! (C) Copyright 2013
|
||||
!
|
||||
! Salvatore Filippone
|
||||
! Alessandro Fanfarillo
|
||||
!
|
||||
! Redistribution and use in source and binary forms, with or without
|
||||
! modification, are permitted provided that the following conditions
|
||||
! are met:
|
||||
! 1. Redistributions of source code must retain the above copyright
|
||||
! notice, this list of conditions and the following disclaimer.
|
||||
! 2. Redistributions in binary form must reproduce the above copyright
|
||||
! notice, this list of conditions, and the following disclaimer in the
|
||||
! documentation and/or other materials provided with the distribution.
|
||||
! 3. The name of the PSBLAS group or the names of its contributors may
|
||||
! not be used to endorse or promote products derived from this
|
||||
! software without specific written permission.
|
||||
!
|
||||
! THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
|
||||
! ``AS IS'' AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED
|
||||
! TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
|
||||
! PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE PSBLAS GROUP OR ITS CONTRIBUTORS
|
||||
! BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
|
||||
! CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
|
||||
! SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
|
||||
! INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
|
||||
! CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
|
||||
! ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
|
||||
! POSSIBILITY OF SUCH DAMAGE.
|
||||
!
|
||||
|
||||
|
||||
subroutine psb_d_cp_rsb_from_coo(a,b,info)
|
||||
|
||||
use psb_base_mod
|
||||
use rsb_mod
|
||||
use psb_d_rsb_mat_mod, psb_protect_name => psb_d_cp_rsb_from_coo
|
||||
implicit none
|
||||
|
||||
class(psb_d_rsb_sparse_mat), intent(inout) :: a
|
||||
class(psb_d_coo_sparse_mat), intent(in) :: b
|
||||
integer(psb_ipk_), intent(out) :: info
|
||||
|
||||
!locals
|
||||
type(psb_d_coo_sparse_mat) :: tmp
|
||||
Integer(Psb_ipk_) :: nza, nr, i,j,irw, idl,err_act, nc
|
||||
integer(psb_ipk_) :: nzm, ir, ic, k ,bs
|
||||
integer(psb_ipk_) :: debug_level, debug_unit
|
||||
character(len=20) :: name
|
||||
|
||||
info = psb_success_
|
||||
#ifdef HAVE_RSB
|
||||
! This is to have fix_coo called behind the scenes
|
||||
call b%cp_to_coo(tmp,info)
|
||||
|
||||
call tmp%fix(info)
|
||||
if (info /= psb_success_) return
|
||||
|
||||
nr = tmp%get_nrows()
|
||||
nc = tmp%get_ncols()
|
||||
nza = tmp%get_nzeros()
|
||||
! If it is sorted then we can lessen memory impact
|
||||
a%psb_d_base_sparse_mat = tmp%psb_d_base_sparse_mat
|
||||
|
||||
bs = 1!RSB_DEFAULT_BLOCKING
|
||||
|
||||
info = Rsb_from_coo(a%rsbMat,b%val,b%ia,b%ja,nza,nr,nc,bs,bs)
|
||||
|
||||
call tmp%free()
|
||||
#endif
|
||||
|
||||
return
|
||||
|
||||
9999 continue
|
||||
info = psb_err_alloc_dealloc_
|
||||
return
|
||||
|
||||
end subroutine psb_d_cp_rsb_from_coo
|
||||
@ -1,77 +0,0 @@
|
||||
! Parallel Sparse BLAS GPU plugin
|
||||
! (C) Copyright 2013
|
||||
!
|
||||
! Salvatore Filippone
|
||||
! Alessandro Fanfarillo
|
||||
!
|
||||
! Redistribution and use in source and binary forms, with or without
|
||||
! modification, are permitted provided that the following conditions
|
||||
! are met:
|
||||
! 1. Redistributions of source code must retain the above copyright
|
||||
! notice, this list of conditions and the following disclaimer.
|
||||
! 2. Redistributions in binary form must reproduce the above copyright
|
||||
! notice, this list of conditions, and the following disclaimer in the
|
||||
! documentation and/or other materials provided with the distribution.
|
||||
! 3. The name of the PSBLAS group or the names of its contributors may
|
||||
! not be used to endorse or promote products derived from this
|
||||
! software without specific written permission.
|
||||
!
|
||||
! THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
|
||||
! ``AS IS'' AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED
|
||||
! TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
|
||||
! PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE PSBLAS GROUP OR ITS CONTRIBUTORS
|
||||
! BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
|
||||
! CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
|
||||
! SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
|
||||
! INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
|
||||
! CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
|
||||
! ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
|
||||
! POSSIBILITY OF SUCH DAMAGE.
|
||||
!
|
||||
|
||||
|
||||
subroutine psb_d_cp_rsb_to_coo(a,b,info)
|
||||
|
||||
use psb_base_mod
|
||||
use rsb
|
||||
use psb_d_rsb_mat_mod, psb_protect_name => psb_d_cp_rsb_to_coo
|
||||
implicit none
|
||||
|
||||
class(psb_d_rsb_sparse_mat), intent(in) :: a
|
||||
class(psb_d_coo_sparse_mat), intent(inout) :: b
|
||||
integer(psb_ipk_), intent(out) :: info
|
||||
real(psb_dpk_), pointer :: val_point(:)
|
||||
type(c_ptr) :: t_p,s_p
|
||||
|
||||
!locals
|
||||
integer(psb_ipk_) :: i, j, k,nr,nza,nc
|
||||
|
||||
info = psb_success_
|
||||
|
||||
nr = a%get_nrows()
|
||||
nc = a%get_ncols()
|
||||
nza = a%get_nzeros()
|
||||
|
||||
call b%allocate(nr,nc,nza)
|
||||
b%psb_d_base_sparse_mat = a%psb_d_base_sparse_mat
|
||||
|
||||
allocate(val_point(nza))
|
||||
|
||||
t_p = c_loc(val_point(1))
|
||||
|
||||
info = rsb_mtx_get_coo(a%rsbMat, t_p, b%ia, b%ja,RSB_FLAG_FORTRAN_INDICES_INTERFACE)
|
||||
|
||||
!info = rsb_mtx_switch_to_coo(a%rsbMat,t_p,b%ia,b%ja,RSB_FLAG_FORTRAN_INDICES_INTERFACE)
|
||||
|
||||
k = rsb_perror(s_p,info)
|
||||
|
||||
do i=1,nza
|
||||
b%val(i)=val_point(i)
|
||||
enddo
|
||||
|
||||
deallocate(val_point)
|
||||
|
||||
call b%set_nzeros(nza)
|
||||
call b%fix(info)
|
||||
|
||||
end subroutine psb_d_cp_rsb_to_coo
|
||||
@ -1,114 +0,0 @@
|
||||
! Parallel Sparse BLAS GPU plugin
|
||||
! (C) Copyright 2013
|
||||
!
|
||||
! Salvatore Filippone
|
||||
! Alessandro Fanfarillo
|
||||
!
|
||||
! Redistribution and use in source and binary forms, with or without
|
||||
! modification, are permitted provided that the following conditions
|
||||
! are met:
|
||||
! 1. Redistributions of source code must retain the above copyright
|
||||
! notice, this list of conditions and the following disclaimer.
|
||||
! 2. Redistributions in binary form must reproduce the above copyright
|
||||
! notice, this list of conditions, and the following disclaimer in the
|
||||
! documentation and/or other materials provided with the distribution.
|
||||
! 3. The name of the PSBLAS group or the names of its contributors may
|
||||
! not be used to endorse or promote products derived from this
|
||||
! software without specific written permission.
|
||||
!
|
||||
! THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
|
||||
! ``AS IS'' AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED
|
||||
! TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
|
||||
! PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE PSBLAS GROUP OR ITS CONTRIBUTORS
|
||||
! BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
|
||||
! CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
|
||||
! SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
|
||||
! INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
|
||||
! CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
|
||||
! ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
|
||||
! POSSIBILITY OF SUCH DAMAGE.
|
||||
!
|
||||
|
||||
|
||||
subroutine psb_d_mv_rsb_from_coo(a,b,info)
|
||||
|
||||
use psb_base_mod
|
||||
use psb_d_rsb_mat_mod, psb_protect_name => psb_d_mv_rsb_from_coo
|
||||
implicit none
|
||||
|
||||
class(psb_d_rsb_sparse_mat), intent(inout) :: a
|
||||
class(psb_d_coo_sparse_mat), intent(inout) :: b
|
||||
integer(psb_ipk_), intent(out) :: info
|
||||
|
||||
!locals
|
||||
Integer(Psb_ipk_) :: nza, nr, i,j,k, idl,err_act, nc, nzm, ir, ic
|
||||
|
||||
info = psb_success_
|
||||
|
||||
call b%fix(info)
|
||||
if (info /= psb_success_) return
|
||||
|
||||
nr = b%get_nrows()
|
||||
nc = b%get_ncols()
|
||||
nza = b%get_nzeros()
|
||||
! if (b%is_sorted()) then
|
||||
! ! If it is sorted then we can lessen memory impact
|
||||
! a%psb_d_base_sparse_mat = b%psb_d_base_sparse_mat
|
||||
|
||||
! ! First compute the number of nonzeros in each row.
|
||||
! call psb_realloc(nr,a%irn,info)
|
||||
! if (info /= 0) goto 9999
|
||||
! a%irn = 0
|
||||
! do i=1, nza
|
||||
! a%irn(b%ia(i)) = a%irn(b%ia(i)) + 1
|
||||
! end do
|
||||
! nzm = 0
|
||||
! do i=1, nr
|
||||
! nzm = max(nzm,a%irn(i))
|
||||
! a%irn(i) = 0
|
||||
! end do
|
||||
! ! Second: copy the column indices.
|
||||
! call psb_realloc(nr,a%idiag,info)
|
||||
! if (info == 0) call psb_realloc(nr,nzm,a%ja,info)
|
||||
! if (info /= 0) goto 9999
|
||||
! do i=1, nza
|
||||
! ir = b%ia(i)
|
||||
! ic = b%ja(i)
|
||||
! j = a%irn(ir) + 1
|
||||
! a%ja(ir,j) = ic
|
||||
! a%irn(ir) = j
|
||||
! end do
|
||||
! ! Third copy the other stuff
|
||||
! deallocate(b%ia,b%ja,stat=info)
|
||||
! if (info == 0) call psb_realloc(nr,a%idiag,info)
|
||||
! if (info == 0) call psb_realloc(nr,nzm,a%val,info)
|
||||
! if (info /= 0) goto 9999
|
||||
! k = 0
|
||||
! do i=1, nr
|
||||
! a%idiag(i) = 0
|
||||
! do j=1, a%irn(i)
|
||||
! k = k + 1
|
||||
! a%val(i,j) = b%val(k)
|
||||
! if (i==a%ja(i,j)) a%idiag(i)=j
|
||||
! end do
|
||||
! do j=a%irn(i)+1, nzm
|
||||
! a%ja(i,j) = i
|
||||
! a%val(i,j) = dzero
|
||||
! end do
|
||||
! end do
|
||||
|
||||
! else
|
||||
! If b is not sorted, the only way is to copy.
|
||||
call a%cp_from_coo(b,info)
|
||||
if (info /= 0) goto 9999
|
||||
! end if
|
||||
|
||||
call b%free()
|
||||
|
||||
return
|
||||
|
||||
9999 continue
|
||||
info = psb_err_alloc_dealloc_
|
||||
return
|
||||
|
||||
end subroutine psb_d_mv_rsb_from_coo
|
||||
@ -1,138 +0,0 @@
|
||||
! Parallel Sparse BLAS GPU plugin
|
||||
! (C) Copyright 2013
|
||||
!
|
||||
! Salvatore Filippone
|
||||
! Alessandro Fanfarillo
|
||||
!
|
||||
! Redistribution and use in source and binary forms, with or without
|
||||
! modification, are permitted provided that the following conditions
|
||||
! are met:
|
||||
! 1. Redistributions of source code must retain the above copyright
|
||||
! notice, this list of conditions and the following disclaimer.
|
||||
! 2. Redistributions in binary form must reproduce the above copyright
|
||||
! notice, this list of conditions, and the following disclaimer in the
|
||||
! documentation and/or other materials provided with the distribution.
|
||||
! 3. The name of the PSBLAS group or the names of its contributors may
|
||||
! not be used to endorse or promote products derived from this
|
||||
! software without specific written permission.
|
||||
!
|
||||
! THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
|
||||
! ``AS IS'' AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED
|
||||
! TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
|
||||
! PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE PSBLAS GROUP OR ITS CONTRIBUTORS
|
||||
! BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
|
||||
! CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
|
||||
! SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
|
||||
! INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
|
||||
! CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
|
||||
! ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
|
||||
! POSSIBILITY OF SUCH DAMAGE.
|
||||
!
|
||||
|
||||
|
||||
subroutine psb_d_rsb_csmv(alpha,a,x,beta,y,info,trans)
|
||||
|
||||
use psb_base_mod
|
||||
use rsb_mod
|
||||
use psb_d_rsb_mat_mod, psb_protect_name => psb_d_rsb_csmv
|
||||
implicit none
|
||||
class(psb_d_rsb_sparse_mat), intent(in) :: a
|
||||
real(psb_dpk_), intent(in) :: alpha, beta, x(:)
|
||||
real(psb_dpk_), intent(inout) :: y(:)
|
||||
integer, intent(out) :: info
|
||||
character, optional, intent(in) :: trans
|
||||
|
||||
character :: trans_
|
||||
integer :: i,j,k,m,n, nnz, ir, jc
|
||||
real(psb_dpk_) :: acc
|
||||
type(c_ptr) :: gpX, gpY
|
||||
logical :: tra
|
||||
Integer :: err_act
|
||||
character(len=20) :: name='d_rsb_csmv'
|
||||
logical, parameter :: debug=.false.
|
||||
|
||||
call psb_erractionsave(err_act)
|
||||
info = psb_success_
|
||||
#ifdef HAVE_RSB
|
||||
if (present(trans)) then
|
||||
trans_ = trans
|
||||
else
|
||||
trans_ = 'N'
|
||||
end if
|
||||
|
||||
if (.not.a%is_asb()) then
|
||||
info = psb_err_invalid_mat_state_
|
||||
call psb_errpush(info,name)
|
||||
goto 9999
|
||||
endif
|
||||
|
||||
|
||||
tra = (psb_toupper(trans_) == 'T').or.(psb_toupper(trans_)=='C')
|
||||
|
||||
if (tra) then
|
||||
m = a%get_ncols()
|
||||
n = a%get_nrows()
|
||||
else
|
||||
n = a%get_ncols()
|
||||
m = a%get_nrows()
|
||||
end if
|
||||
|
||||
if (size(x,1)<n) then
|
||||
info = 36
|
||||
call psb_errpush(info,name,i_err=(/3*ione,n,izero,izero,izero/))
|
||||
goto 9999
|
||||
end if
|
||||
|
||||
if (size(y,1)<m) then
|
||||
info = 36
|
||||
call psb_errpush(info,name,i_err=(/5*ione,m,izero,izero,izero/))
|
||||
goto 9999
|
||||
end if
|
||||
|
||||
! if (tra) then
|
||||
! call a%psb_d_hll_sparse_mat%spmm(alpha,x,beta,y,info,trans)
|
||||
! else
|
||||
|
||||
info = Rsb_spmv(a%rsbMat,x,alpha,y,beta,trans_)
|
||||
|
||||
if (info /= 0) goto 9999
|
||||
|
||||
! if (info == 0) &
|
||||
! & info = FallocMultiVecDevice(gpX,1,size(x,1),spgpu_type_double)
|
||||
! if (alpha /= dzero) then
|
||||
! if (info == 0) &
|
||||
! & info = writeMultiVecDevice(gpX,x)
|
||||
! end if
|
||||
! if (info == 0) &
|
||||
! & info = FallocMultiVecDevice(gpY,1,size(y,1),spgpu_type_double)
|
||||
! if (beta /= dzero) then
|
||||
! if (info == 0) &
|
||||
! & info = writeMultiVecDevice(gpY,y)
|
||||
! end if
|
||||
! if (info == 0) &
|
||||
! & info = spmvHllDevice(a%deviceMat,alpha,gpX,beta,gpY)
|
||||
! if (info == 0) &
|
||||
! & info = readMultiVecDevice(gpY,y)
|
||||
! if (info /= 0) goto 9999
|
||||
! call freeMultiVecDevice(gpX)
|
||||
! call freeMultiVecDevice(gpY)
|
||||
! endif
|
||||
! #else
|
||||
! call a%psb_d_hll_sparse_mat%spmm(alpha,x,beta,y,info,trans)
|
||||
! write(*,*) y
|
||||
#endif
|
||||
|
||||
call psb_erractionrestore(err_act)
|
||||
return
|
||||
|
||||
9999 continue
|
||||
call psb_erractionrestore(err_act)
|
||||
|
||||
if (err_act == psb_act_abort_) then
|
||||
call psb_error()
|
||||
return
|
||||
end if
|
||||
return
|
||||
|
||||
|
||||
end subroutine psb_d_rsb_csmv
|
||||
@ -1,487 +0,0 @@
|
||||
! Parallel Sparse BLAS GPU plugin
|
||||
! (C) Copyright 2013
|
||||
!
|
||||
! Salvatore Filippone
|
||||
! Alessandro Fanfarillo
|
||||
!
|
||||
! Redistribution and use in source and binary forms, with or without
|
||||
! modification, are permitted provided that the following conditions
|
||||
! are met:
|
||||
! 1. Redistributions of source code must retain the above copyright
|
||||
! notice, this list of conditions and the following disclaimer.
|
||||
! 2. Redistributions in binary form must reproduce the above copyright
|
||||
! notice, this list of conditions, and the following disclaimer in the
|
||||
! documentation and/or other materials provided with the distribution.
|
||||
! 3. The name of the PSBLAS group or the names of its contributors may
|
||||
! not be used to endorse or promote products derived from this
|
||||
! software without specific written permission.
|
||||
!
|
||||
! THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
|
||||
! ``AS IS'' AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED
|
||||
! TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
|
||||
! PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE PSBLAS GROUP OR ITS CONTRIBUTORS
|
||||
! BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
|
||||
! CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
|
||||
! SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
|
||||
! INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
|
||||
! CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
|
||||
! ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
|
||||
! POSSIBILITY OF SUCH DAMAGE.
|
||||
!
|
||||
|
||||
module psb_d_rsb_mat_mod
|
||||
|
||||
use psb_d_base_mat_mod
|
||||
use iso_c_binding
|
||||
|
||||
type, extends(psb_d_base_sparse_mat) :: psb_d_rsb_sparse_mat
|
||||
|
||||
type(c_ptr) :: rsbMat = c_null_ptr
|
||||
|
||||
contains
|
||||
! procedure, pass(a) :: get_size => d_rsb_get_size
|
||||
procedure, pass(a) :: get_nzeros => d_rsb_get_nzeros
|
||||
procedure, nopass :: get_fmt => d_rsb_get_fmt
|
||||
procedure, pass(a) :: sizeof => d_rsb_sizeof
|
||||
! procedure, pass(a) :: csmm => psb_d_rsb_csmm
|
||||
procedure, pass(a) :: csmv => psb_d_rsb_csmv
|
||||
! procedure, pass(a) :: inner_cssm => psb_d_rsb_cssm
|
||||
! procedure, pass(a) :: inner_cssv => psb_d_rsb_cssv
|
||||
! procedure, pass(a) :: scals => psb_d_rsb_scals
|
||||
! procedure, pass(a) :: scalv => psb_d_rsb_scal
|
||||
! procedure, pass(a) :: maxval => psb_d_rsb_maxval
|
||||
! procedure, pass(a) :: csnmi => psb_d_rsb_csnmi
|
||||
! procedure, pass(a) :: csnm1 => psb_d_rsb_csnm1
|
||||
! procedure, pass(a) :: rowsum => psb_d_rsb_rowsum
|
||||
! procedure, pass(a) :: arwsum => psb_d_rsb_arwsum
|
||||
! procedure, pass(a) :: colsum => psb_d_rsb_colsum
|
||||
! procedure, pass(a) :: aclsum => psb_d_rsb_aclsum
|
||||
! procedure, pass(a) :: reallocate_nz => psb_d_rsb_reallocate_nz
|
||||
! procedure, pass(a) :: allocate_mnnz => psb_d_rsb_allocate_mnnz
|
||||
procedure, pass(a) :: cp_to_coo => psb_d_cp_rsb_to_coo
|
||||
procedure, pass(a) :: cp_from_coo => psb_d_cp_rsb_from_coo
|
||||
! procedure, pass(a) :: cp_to_fmt => psb_d_cp_rsb_to_fmt
|
||||
! procedure, pass(a) :: cp_from_fmt => psb_d_cp_rsb_from_fmt
|
||||
! procedure, pass(a) :: mv_to_coo => psb_d_mv_rsb_to_coo
|
||||
procedure, pass(a) :: mv_from_coo => psb_d_mv_rsb_from_coo
|
||||
! procedure, pass(a) :: mv_to_fmt => psb_d_mv_rsb_to_fmt
|
||||
! procedure, pass(a) :: mv_from_fmt => psb_d_mv_rsb_from_fmt
|
||||
! procedure, pass(a) :: csput => psb_d_rsb_csput
|
||||
! procedure, pass(a) :: get_diag => psb_d_rsb_get_diag
|
||||
! procedure, pass(a) :: csgetptn => psb_d_rsb_csgetptn
|
||||
! procedure, pass(a) :: csgetrow => psb_d_rsb_csgetrow
|
||||
! procedure, pass(a) :: get_nz_row => d_rsb_get_nz_row
|
||||
! procedure, pass(a) :: reinit => psb_d_rsb_reinit
|
||||
! procedure, pass(a) :: trim => psb_d_rsb_trim
|
||||
! procedure, pass(a) :: print => psb_d_rsb_print
|
||||
procedure, pass(a) :: free => d_rsb_free
|
||||
! procedure, pass(a) :: mold => psb_d_rsb_mold
|
||||
|
||||
end type psb_d_rsb_sparse_mat
|
||||
|
||||
private :: d_rsb_get_nzeros, d_rsb_free, d_rsb_get_fmt, &
|
||||
& d_rsb_get_size, d_rsb_sizeof, d_rsb_get_nz_row
|
||||
|
||||
interface
|
||||
subroutine psb_d_rsb_reallocate_nz(nz,a)
|
||||
import :: psb_d_rsb_sparse_mat, psb_ipk_
|
||||
integer(psb_ipk_), intent(in) :: nz
|
||||
class(psb_d_rsb_sparse_mat), intent(inout) :: a
|
||||
end subroutine psb_d_rsb_reallocate_nz
|
||||
end interface
|
||||
|
||||
interface
|
||||
subroutine psb_d_rsb_reinit(a,clear)
|
||||
import :: psb_d_rsb_sparse_mat
|
||||
class(psb_d_rsb_sparse_mat), intent(inout) :: a
|
||||
logical, intent(in), optional :: clear
|
||||
end subroutine psb_d_rsb_reinit
|
||||
end interface
|
||||
|
||||
interface
|
||||
subroutine psb_d_rsb_trim(a)
|
||||
import :: psb_d_rsb_sparse_mat
|
||||
class(psb_d_rsb_sparse_mat), intent(inout) :: a
|
||||
end subroutine psb_d_rsb_trim
|
||||
end interface
|
||||
|
||||
interface
|
||||
subroutine psb_d_rsb_mold(a,b,info)
|
||||
import :: psb_d_rsb_sparse_mat, psb_d_base_sparse_mat, psb_ipk_
|
||||
class(psb_d_rsb_sparse_mat), intent(in) :: a
|
||||
class(psb_d_base_sparse_mat), intent(inout), allocatable :: b
|
||||
integer(psb_ipk_), intent(out) :: info
|
||||
end subroutine psb_d_rsb_mold
|
||||
end interface
|
||||
|
||||
interface
|
||||
subroutine psb_d_rsb_allocate_mnnz(m,n,a,nz)
|
||||
import :: psb_d_rsb_sparse_mat, psb_ipk_
|
||||
integer(psb_ipk_), intent(in) :: m,n
|
||||
class(psb_d_rsb_sparse_mat), intent(inout) :: a
|
||||
integer(psb_ipk_), intent(in), optional :: nz
|
||||
end subroutine psb_d_rsb_allocate_mnnz
|
||||
end interface
|
||||
|
||||
interface
|
||||
subroutine psb_d_rsb_print(iout,a,iv,head,ivr,ivc)
|
||||
import :: psb_d_rsb_sparse_mat, psb_ipk_
|
||||
integer(psb_ipk_), intent(in) :: iout
|
||||
class(psb_d_rsb_sparse_mat), intent(in) :: a
|
||||
integer(psb_ipk_), intent(in), optional :: iv(:)
|
||||
character(len=*), optional :: head
|
||||
integer(psb_ipk_), intent(in), optional :: ivr(:), ivc(:)
|
||||
end subroutine psb_d_rsb_print
|
||||
end interface
|
||||
|
||||
interface
|
||||
subroutine psb_d_cp_rsb_to_coo(a,b,info)
|
||||
import :: psb_d_coo_sparse_mat, psb_d_rsb_sparse_mat, psb_ipk_
|
||||
class(psb_d_rsb_sparse_mat), intent(in) :: a
|
||||
class(psb_d_coo_sparse_mat), intent(inout) :: b
|
||||
integer(psb_ipk_), intent(out) :: info
|
||||
end subroutine psb_d_cp_rsb_to_coo
|
||||
end interface
|
||||
|
||||
interface
|
||||
subroutine psb_d_cp_rsb_from_coo(a,b,info)
|
||||
import :: psb_d_rsb_sparse_mat, psb_d_coo_sparse_mat, psb_ipk_
|
||||
class(psb_d_rsb_sparse_mat), intent(inout) :: a
|
||||
class(psb_d_coo_sparse_mat), intent(in) :: b
|
||||
integer(psb_ipk_), intent(out) :: info
|
||||
end subroutine psb_d_cp_rsb_from_coo
|
||||
end interface
|
||||
|
||||
interface
|
||||
subroutine psb_d_cp_rsb_to_fmt(a,b,info)
|
||||
import :: psb_d_rsb_sparse_mat, psb_d_base_sparse_mat, psb_ipk_
|
||||
class(psb_d_rsb_sparse_mat), intent(in) :: a
|
||||
class(psb_d_base_sparse_mat), intent(inout) :: b
|
||||
integer(psb_ipk_), intent(out) :: info
|
||||
end subroutine psb_d_cp_rsb_to_fmt
|
||||
end interface
|
||||
|
||||
interface
|
||||
subroutine psb_d_cp_rsb_from_fmt(a,b,info)
|
||||
import :: psb_d_rsb_sparse_mat, psb_d_base_sparse_mat, psb_ipk_
|
||||
class(psb_d_rsb_sparse_mat), intent(inout) :: a
|
||||
class(psb_d_base_sparse_mat), intent(in) :: b
|
||||
integer(psb_ipk_), intent(out) :: info
|
||||
end subroutine psb_d_cp_rsb_from_fmt
|
||||
end interface
|
||||
|
||||
interface
|
||||
subroutine psb_d_mv_rsb_to_coo(a,b,info)
|
||||
import :: psb_d_rsb_sparse_mat, psb_d_coo_sparse_mat, psb_ipk_
|
||||
class(psb_d_rsb_sparse_mat), intent(inout) :: a
|
||||
class(psb_d_coo_sparse_mat), intent(inout) :: b
|
||||
integer(psb_ipk_), intent(out) :: info
|
||||
end subroutine psb_d_mv_rsb_to_coo
|
||||
end interface
|
||||
|
||||
interface
|
||||
subroutine psb_d_mv_rsb_from_coo(a,b,info)
|
||||
import :: psb_d_rsb_sparse_mat, psb_d_coo_sparse_mat, psb_ipk_
|
||||
class(psb_d_rsb_sparse_mat), intent(inout) :: a
|
||||
class(psb_d_coo_sparse_mat), intent(inout) :: b
|
||||
integer(psb_ipk_), intent(out) :: info
|
||||
end subroutine psb_d_mv_rsb_from_coo
|
||||
end interface
|
||||
|
||||
interface
|
||||
subroutine psb_d_mv_rsb_to_fmt(a,b,info)
|
||||
import :: psb_d_rsb_sparse_mat, psb_d_base_sparse_mat, psb_ipk_
|
||||
class(psb_d_rsb_sparse_mat), intent(inout) :: a
|
||||
class(psb_d_base_sparse_mat), intent(inout) :: b
|
||||
integer(psb_ipk_), intent(out) :: info
|
||||
end subroutine psb_d_mv_rsb_to_fmt
|
||||
end interface
|
||||
|
||||
interface
|
||||
subroutine psb_d_mv_rsb_from_fmt(a,b,info)
|
||||
import :: psb_d_rsb_sparse_mat, psb_d_base_sparse_mat, psb_ipk_
|
||||
class(psb_d_rsb_sparse_mat), intent(inout) :: a
|
||||
class(psb_d_base_sparse_mat), intent(inout) :: b
|
||||
integer(psb_ipk_), intent(out) :: info
|
||||
end subroutine psb_d_mv_rsb_from_fmt
|
||||
end interface
|
||||
|
||||
interface
|
||||
subroutine psb_d_rsb_csput(nz,ia,ja,val,a,imin,imax,jmin,jmax,info,gtl)
|
||||
import :: psb_d_rsb_sparse_mat, psb_dpk_, psb_ipk_
|
||||
class(psb_d_rsb_sparse_mat), intent(inout) :: a
|
||||
real(psb_dpk_), intent(in) :: val(:)
|
||||
integer(psb_ipk_), intent(in) :: nz,ia(:), ja(:),&
|
||||
& imin,imax,jmin,jmax
|
||||
integer(psb_ipk_), intent(out) :: info
|
||||
integer(psb_ipk_), intent(in), optional :: gtl(:)
|
||||
end subroutine psb_d_rsb_csput
|
||||
end interface
|
||||
|
||||
interface
|
||||
subroutine psb_d_rsb_csgetptn(imin,imax,a,nz,ia,ja,info,&
|
||||
& jmin,jmax,iren,append,nzin,rscale,cscale)
|
||||
import :: psb_d_rsb_sparse_mat, psb_dpk_, psb_ipk_
|
||||
class(psb_d_rsb_sparse_mat), intent(in) :: a
|
||||
integer(psb_ipk_), intent(in) :: imin,imax
|
||||
integer(psb_ipk_), intent(out) :: nz
|
||||
integer(psb_ipk_), allocatable, intent(inout) :: ia(:), ja(:)
|
||||
integer(psb_ipk_),intent(out) :: info
|
||||
logical, intent(in), optional :: append
|
||||
integer(psb_ipk_), intent(in), optional :: iren(:)
|
||||
integer(psb_ipk_), intent(in), optional :: jmin,jmax, nzin
|
||||
logical, intent(in), optional :: rscale,cscale
|
||||
end subroutine psb_d_rsb_csgetptn
|
||||
end interface
|
||||
|
||||
interface
|
||||
subroutine psb_d_rsb_csgetrow(imin,imax,a,nz,ia,ja,val,info,&
|
||||
& jmin,jmax,iren,append,nzin,rscale,cscale)
|
||||
import :: psb_d_rsb_sparse_mat, psb_dpk_, psb_ipk_
|
||||
class(psb_d_rsb_sparse_mat), intent(in) :: a
|
||||
integer(psb_ipk_), intent(in) :: imin,imax
|
||||
integer(psb_ipk_), intent(out) :: nz
|
||||
integer(psb_ipk_), allocatable, intent(inout) :: ia(:), ja(:)
|
||||
real(psb_dpk_), allocatable, intent(inout) :: val(:)
|
||||
integer(psb_ipk_),intent(out) :: info
|
||||
logical, intent(in), optional :: append
|
||||
integer(psb_ipk_), intent(in), optional :: iren(:)
|
||||
integer(psb_ipk_), intent(in), optional :: jmin,jmax, nzin
|
||||
logical, intent(in), optional :: rscale,cscale
|
||||
end subroutine psb_d_rsb_csgetrow
|
||||
end interface
|
||||
|
||||
interface
|
||||
subroutine psb_d_rsb_csgetblk(imin,imax,a,b,info,&
|
||||
& jmin,jmax,iren,append,rscale,cscale)
|
||||
import :: psb_d_rsb_sparse_mat, psb_dpk_, psb_d_coo_sparse_mat, psb_ipk_
|
||||
class(psb_d_rsb_sparse_mat), intent(in) :: a
|
||||
class(psb_d_coo_sparse_mat), intent(inout) :: b
|
||||
integer(psb_ipk_), intent(in) :: imin,imax
|
||||
integer(psb_ipk_),intent(out) :: info
|
||||
logical, intent(in), optional :: append
|
||||
integer(psb_ipk_), intent(in), optional :: iren(:)
|
||||
integer(psb_ipk_), intent(in), optional :: jmin,jmax
|
||||
logical, intent(in), optional :: rscale,cscale
|
||||
end subroutine psb_d_rsb_csgetblk
|
||||
end interface
|
||||
|
||||
interface
|
||||
subroutine psb_d_rsb_cssv(alpha,a,x,beta,y,info,trans)
|
||||
import :: psb_d_rsb_sparse_mat, psb_dpk_, psb_ipk_
|
||||
class(psb_d_rsb_sparse_mat), intent(in) :: a
|
||||
real(psb_dpk_), intent(in) :: alpha, beta, x(:)
|
||||
real(psb_dpk_), intent(inout) :: y(:)
|
||||
integer(psb_ipk_), intent(out) :: info
|
||||
character, optional, intent(in) :: trans
|
||||
end subroutine psb_d_rsb_cssv
|
||||
subroutine psb_d_rsb_cssm(alpha,a,x,beta,y,info,trans)
|
||||
import :: psb_d_rsb_sparse_mat, psb_dpk_, psb_ipk_
|
||||
class(psb_d_rsb_sparse_mat), intent(in) :: a
|
||||
real(psb_dpk_), intent(in) :: alpha, beta, x(:,:)
|
||||
real(psb_dpk_), intent(inout) :: y(:,:)
|
||||
integer(psb_ipk_), intent(out) :: info
|
||||
character, optional, intent(in) :: trans
|
||||
end subroutine psb_d_rsb_cssm
|
||||
end interface
|
||||
|
||||
interface
|
||||
subroutine psb_d_rsb_csmv(alpha,a,x,beta,y,info,trans)
|
||||
import :: psb_d_rsb_sparse_mat, psb_dpk_, psb_ipk_
|
||||
class(psb_d_rsb_sparse_mat), intent(in) :: a
|
||||
real(psb_dpk_), intent(in) :: alpha, beta, x(:)
|
||||
real(psb_dpk_), intent(inout) :: y(:)
|
||||
integer(psb_ipk_), intent(out) :: info
|
||||
character, optional, intent(in) :: trans
|
||||
end subroutine psb_d_rsb_csmv
|
||||
subroutine psb_d_rsb_csmm(alpha,a,x,beta,y,info,trans)
|
||||
import :: psb_d_rsb_sparse_mat, psb_dpk_, psb_ipk_
|
||||
class(psb_d_rsb_sparse_mat), intent(in) :: a
|
||||
real(psb_dpk_), intent(in) :: alpha, beta, x(:,:)
|
||||
real(psb_dpk_), intent(inout) :: y(:,:)
|
||||
integer(psb_ipk_), intent(out) :: info
|
||||
character, optional, intent(in) :: trans
|
||||
end subroutine psb_d_rsb_csmm
|
||||
end interface
|
||||
|
||||
|
||||
interface
|
||||
function psb_d_rsb_maxval(a) result(res)
|
||||
import :: psb_d_rsb_sparse_mat, psb_dpk_
|
||||
class(psb_d_rsb_sparse_mat), intent(in) :: a
|
||||
real(psb_dpk_) :: res
|
||||
end function psb_d_rsb_maxval
|
||||
end interface
|
||||
|
||||
interface
|
||||
function psb_d_rsb_csnmi(a) result(res)
|
||||
import :: psb_d_rsb_sparse_mat, psb_dpk_
|
||||
class(psb_d_rsb_sparse_mat), intent(in) :: a
|
||||
real(psb_dpk_) :: res
|
||||
end function psb_d_rsb_csnmi
|
||||
end interface
|
||||
|
||||
interface
|
||||
function psb_d_rsb_csnm1(a) result(res)
|
||||
import :: psb_d_rsb_sparse_mat, psb_dpk_
|
||||
class(psb_d_rsb_sparse_mat), intent(in) :: a
|
||||
real(psb_dpk_) :: res
|
||||
end function psb_d_rsb_csnm1
|
||||
end interface
|
||||
|
||||
interface
|
||||
subroutine psb_d_rsb_rowsum(d,a)
|
||||
import :: psb_d_rsb_sparse_mat, psb_dpk_
|
||||
class(psb_d_rsb_sparse_mat), intent(in) :: a
|
||||
real(psb_dpk_), intent(out) :: d(:)
|
||||
end subroutine psb_d_rsb_rowsum
|
||||
end interface
|
||||
|
||||
interface
|
||||
subroutine psb_d_rsb_arwsum(d,a)
|
||||
import :: psb_d_rsb_sparse_mat, psb_dpk_
|
||||
class(psb_d_rsb_sparse_mat), intent(in) :: a
|
||||
real(psb_dpk_), intent(out) :: d(:)
|
||||
end subroutine psb_d_rsb_arwsum
|
||||
end interface
|
||||
|
||||
interface
|
||||
subroutine psb_d_rsb_colsum(d,a)
|
||||
import :: psb_d_rsb_sparse_mat, psb_dpk_
|
||||
class(psb_d_rsb_sparse_mat), intent(in) :: a
|
||||
real(psb_dpk_), intent(out) :: d(:)
|
||||
end subroutine psb_d_rsb_colsum
|
||||
end interface
|
||||
|
||||
interface
|
||||
subroutine psb_d_rsb_aclsum(d,a)
|
||||
import :: psb_d_rsb_sparse_mat, psb_dpk_
|
||||
class(psb_d_rsb_sparse_mat), intent(in) :: a
|
||||
real(psb_dpk_), intent(out) :: d(:)
|
||||
end subroutine psb_d_rsb_aclsum
|
||||
end interface
|
||||
|
||||
interface
|
||||
subroutine psb_d_rsb_get_diag(a,d,info)
|
||||
import :: psb_d_rsb_sparse_mat, psb_dpk_, psb_ipk_
|
||||
class(psb_d_rsb_sparse_mat), intent(in) :: a
|
||||
real(psb_dpk_), intent(out) :: d(:)
|
||||
integer(psb_ipk_), intent(out) :: info
|
||||
end subroutine psb_d_rsb_get_diag
|
||||
end interface
|
||||
|
||||
interface
|
||||
subroutine psb_d_rsb_scal(d,a,info,side)
|
||||
import :: psb_d_rsb_sparse_mat, psb_dpk_, psb_ipk_
|
||||
class(psb_d_rsb_sparse_mat), intent(inout) :: a
|
||||
real(psb_dpk_), intent(in) :: d(:)
|
||||
integer(psb_ipk_), intent(out) :: info
|
||||
character, intent(in), optional :: side
|
||||
end subroutine psb_d_rsb_scal
|
||||
end interface
|
||||
|
||||
interface
|
||||
subroutine psb_d_rsb_scals(d,a,info)
|
||||
import :: psb_d_rsb_sparse_mat, psb_dpk_, psb_ipk_
|
||||
class(psb_d_rsb_sparse_mat), intent(inout) :: a
|
||||
real(psb_dpk_), intent(in) :: d
|
||||
integer(psb_ipk_), intent(out) :: info
|
||||
end subroutine psb_d_rsb_scals
|
||||
end interface
|
||||
|
||||
|
||||
|
||||
contains
|
||||
|
||||
! == ===================================
|
||||
!
|
||||
!
|
||||
!
|
||||
! Getters
|
||||
!
|
||||
!
|
||||
!
|
||||
!
|
||||
!
|
||||
! == ===================================
|
||||
|
||||
|
||||
function d_rsb_sizeof(a) result(res)
|
||||
implicit none
|
||||
class(psb_d_rsb_sparse_mat), intent(in) :: a
|
||||
integer(psb_epk_) :: res
|
||||
|
||||
|
||||
|
||||
|
||||
end function d_rsb_sizeof
|
||||
|
||||
function d_rsb_get_fmt() result(res)
|
||||
implicit none
|
||||
character(len=5) :: res
|
||||
res = 'RSB'
|
||||
end function d_rsb_get_fmt
|
||||
|
||||
function d_rsb_get_nzeros(a) result(res)
|
||||
use rsb_mod
|
||||
implicit none
|
||||
class(psb_d_rsb_sparse_mat), intent(in) :: a
|
||||
integer(psb_ipk_) :: res
|
||||
|
||||
res = Rsb_get_nzeros(a%rsbMat)
|
||||
|
||||
end function d_rsb_get_nzeros
|
||||
|
||||
function d_rsb_get_size(a) result(res)
|
||||
implicit none
|
||||
class(psb_d_rsb_sparse_mat), intent(in) :: a
|
||||
integer(psb_ipk_) :: res
|
||||
|
||||
end function d_rsb_get_size
|
||||
|
||||
|
||||
function d_rsb_get_nz_row(idx,a) result(res)
|
||||
|
||||
implicit none
|
||||
|
||||
class(psb_d_rsb_sparse_mat), intent(in) :: a
|
||||
integer(psb_ipk_), intent(in) :: idx
|
||||
integer(psb_ipk_) :: res
|
||||
|
||||
res = 0
|
||||
|
||||
|
||||
end function d_rsb_get_nz_row
|
||||
|
||||
|
||||
|
||||
! == ===================================
|
||||
!
|
||||
!
|
||||
!
|
||||
! Data management
|
||||
!
|
||||
!
|
||||
!
|
||||
!
|
||||
!
|
||||
! == ===================================
|
||||
|
||||
subroutine d_rsb_free(a)
|
||||
use rsb_mod
|
||||
implicit none
|
||||
|
||||
class(psb_d_rsb_sparse_mat), intent(inout) :: a
|
||||
|
||||
call freeRsbMat(a%rsbMat)
|
||||
|
||||
call a%set_null()
|
||||
call a%set_nrows(0)
|
||||
call a%set_ncols(0)
|
||||
|
||||
return
|
||||
|
||||
end subroutine d_rsb_free
|
||||
|
||||
|
||||
end module psb_d_rsb_mat_mod
|
||||
@ -1,50 +0,0 @@
|
||||
! Parallel Sparse BLAS GPU plugin
|
||||
! (C) Copyright 2013
|
||||
!
|
||||
! Salvatore Filippone
|
||||
! Alessandro Fanfarillo
|
||||
!
|
||||
! Redistribution and use in source and binary forms, with or without
|
||||
! modification, are permitted provided that the following conditions
|
||||
! are met:
|
||||
! 1. Redistributions of source code must retain the above copyright
|
||||
! notice, this list of conditions and the following disclaimer.
|
||||
! 2. Redistributions in binary form must reproduce the above copyright
|
||||
! notice, this list of conditions, and the following disclaimer in the
|
||||
! documentation and/or other materials provided with the distribution.
|
||||
! 3. The name of the PSBLAS group or the names of its contributors may
|
||||
! not be used to endorse or promote products derived from this
|
||||
! software without specific written permission.
|
||||
!
|
||||
! THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
|
||||
! ``AS IS'' AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED
|
||||
! TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
|
||||
! PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE PSBLAS GROUP OR ITS CONTRIBUTORS
|
||||
! BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
|
||||
! CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
|
||||
! SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
|
||||
! INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
|
||||
! CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
|
||||
! ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
|
||||
! POSSIBILITY OF SUCH DAMAGE.
|
||||
!
|
||||
|
||||
|
||||
module psb_rsb_mod
|
||||
use psb_const_mod
|
||||
use rsb_mod
|
||||
use psb_rsb_penv_mod
|
||||
! use psb_d_ell_mat_mod
|
||||
! use psb_s_ell_mat_mod
|
||||
! use psb_z_ell_mat_mod
|
||||
! use psb_c_ell_mat_mod
|
||||
|
||||
! use psb_s_hll_mat_mod
|
||||
! use psb_d_hll_mat_mod
|
||||
! use psb_c_hll_mat_mod
|
||||
! use psb_z_hll_mat_mod
|
||||
|
||||
! use psb_d_dia_mat_mod
|
||||
! use psb_d_hdia_mat_mod
|
||||
use psb_d_rsb_mat_mod
|
||||
end module psb_rsb_mod
|
||||
@ -1,99 +0,0 @@
|
||||
! Parallel Sparse BLAS GPU plugin
|
||||
! (C) Copyright 2013
|
||||
!
|
||||
! Salvatore Filippone
|
||||
! Alessandro Fanfarillo
|
||||
!
|
||||
! Redistribution and use in source and binary forms, with or without
|
||||
! modification, are permitted provided that the following conditions
|
||||
! are met:
|
||||
! 1. Redistributions of source code must retain the above copyright
|
||||
! notice, this list of conditions and the following disclaimer.
|
||||
! 2. Redistributions in binary form must reproduce the above copyright
|
||||
! notice, this list of conditions, and the following disclaimer in the
|
||||
! documentation and/or other materials provided with the distribution.
|
||||
! 3. The name of the PSBLAS group or the names of its contributors may
|
||||
! not be used to endorse or promote products derived from this
|
||||
! software without specific written permission.
|
||||
!
|
||||
! THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
|
||||
! ``AS IS'' AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED
|
||||
! TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
|
||||
! PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE PSBLAS GROUP OR ITS CONTRIBUTORS
|
||||
! BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
|
||||
! CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
|
||||
! SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
|
||||
! INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
|
||||
! CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
|
||||
! ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
|
||||
! POSSIBILITY OF SUCH DAMAGE.
|
||||
!
|
||||
|
||||
|
||||
module psb_rsb_penv_mod
|
||||
use psb_const_mod
|
||||
use psb_penv_mod
|
||||
!use psi_comm_buffers_mod, only : psb_buffer_queue
|
||||
use iso_c_binding
|
||||
|
||||
! interface psb_rsb_init
|
||||
! module procedure psb_rsb_init
|
||||
! end interface
|
||||
#if defined(HAVE_RSB)
|
||||
interface
|
||||
function psb_C_rsb_init() &
|
||||
& result(res) bind(c,name='rsbInit')
|
||||
use iso_c_binding
|
||||
integer(c_int) :: res
|
||||
end function psb_C_rsb_init
|
||||
end interface
|
||||
|
||||
interface
|
||||
function psb_C_rsb_exit() &
|
||||
& result(res) bind(c,name='rsbExit')
|
||||
use iso_c_binding
|
||||
integer(c_int) :: res
|
||||
end function psb_C_rsb_exit
|
||||
end interface
|
||||
|
||||
#endif
|
||||
|
||||
contains
|
||||
! !!!!!!!!!!!!!!!!!!!!!!
|
||||
!
|
||||
! Environment handling
|
||||
!
|
||||
! !!!!!!!!!!!!!!!!!!!!!!
|
||||
|
||||
|
||||
subroutine psb_rsb_init()
|
||||
use psb_penv_mod
|
||||
use psb_const_mod
|
||||
use psb_error_mod
|
||||
! type(psb_ctxt_type), intent(in) :: ctxt
|
||||
! integer, intent(in), optional :: dev
|
||||
|
||||
integer :: info
|
||||
|
||||
#if defined (HAVE_RSB)
|
||||
info = psb_C_rsb_init()
|
||||
if (info/=0) write(*,*) 'error during rsb_init'
|
||||
#endif
|
||||
end subroutine psb_rsb_init
|
||||
|
||||
subroutine psb_rsb_exit()
|
||||
use psb_penv_mod
|
||||
use psb_const_mod
|
||||
use psb_error_mod
|
||||
! type(psb_ctxt_type), intent(in) :: ctxt
|
||||
! integer, intent(in), optional :: dev
|
||||
|
||||
integer :: info
|
||||
|
||||
#if defined (HAVE_RSB)
|
||||
info = psb_C_rsb_exit()
|
||||
if (info/=0) write(*,*) 'error during rsb_exit'
|
||||
#endif
|
||||
end subroutine psb_rsb_exit
|
||||
|
||||
end module psb_rsb_penv_mod
|
||||
@ -1,110 +0,0 @@
|
||||
/* Parallel Sparse BLAS GPU plugin */
|
||||
/* (C) Copyright 2013 */
|
||||
|
||||
/* Salvatore Filippone */
|
||||
/* Alessandro Fanfarillo */
|
||||
|
||||
/* Redistribution and use in source and binary forms, with or without */
|
||||
/* modification, are permitted provided that the following conditions */
|
||||
/* are met: */
|
||||
/* 1. Redistributions of source code must retain the above copyright */
|
||||
/* notice, this list of conditions and the following disclaimer. */
|
||||
/* 2. Redistributions in binary form must reproduce the above copyright */
|
||||
/* notice, this list of conditions, and the following disclaimer in the */
|
||||
/* documentation and/or other materials provided with the distribution. */
|
||||
/* 3. The name of the PSBLAS group or the names of its contributors may */
|
||||
/* not be used to endorse or promote products derived from this */
|
||||
/* software without specific written permission. */
|
||||
|
||||
/* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS */
|
||||
/* ``AS IS'' AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED */
|
||||
/* TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR */
|
||||
/* PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE PSBLAS GROUP OR ITS CONTRIBUTORS */
|
||||
/* BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR */
|
||||
/* CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF */
|
||||
/* SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS */
|
||||
/* INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN */
|
||||
/* CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) */
|
||||
/* ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE */
|
||||
/* POSSIBILITY OF SUCH DAMAGE. */
|
||||
|
||||
#include <sys/time.h>
|
||||
#if defined(HAVE_RSB)
|
||||
#include "rsb.h"
|
||||
#include "rsb_int.h"
|
||||
|
||||
int rsbInit()
|
||||
{
|
||||
rsb_err_t errval = RSB_ERR_NO_ERROR;
|
||||
|
||||
if((errval = rsb_lib_init(RSB_NULL_INIT_OPTIONS))!=RSB_ERR_NO_ERROR)
|
||||
{
|
||||
printf("Error initializing the library!\n");
|
||||
return 1;
|
||||
}
|
||||
|
||||
return 0;
|
||||
}
|
||||
|
||||
int rsbExit()
|
||||
{
|
||||
rsb_err_t errval = RSB_ERR_NO_ERROR;
|
||||
|
||||
if((errval = rsb_lib_exit(RSB_NULL_INIT_OPTIONS))!=RSB_ERR_NO_ERROR)
|
||||
{
|
||||
printf("Error finalizing the library!\n");
|
||||
return 1;
|
||||
}
|
||||
|
||||
return 0;
|
||||
}
|
||||
|
||||
int Rsb_double_from_coo(void **rsbMat, double *va, int *ia,int *ja,int nnz,int nr,
|
||||
int nc, int br, int bc)
|
||||
{
|
||||
int i=0;
|
||||
rsb_err_t errval = RSB_ERR_NO_ERROR;
|
||||
|
||||
*rsbMat = rsb_mtx_alloc_from_coo_const(va,ia,ja,nnz,RSB_NUMERICAL_TYPE_DOUBLE,nr,nc,br,bc,RSB_FLAG_FORTRAN_INDICES_INTERFACE,&errval);
|
||||
|
||||
if((!*rsbMat) || (errval != RSB_ERR_NO_ERROR))
|
||||
{
|
||||
printf("Error while allocating the matrix!\n");
|
||||
return 1;
|
||||
}
|
||||
return 0;
|
||||
}
|
||||
|
||||
//X is the input and y is the output
|
||||
int Rsb_double_spmv(void *rsbMat, double *x, double alfa, double *y, double beta,char trans)
|
||||
{
|
||||
rsb_err_t errval = RSB_ERR_NO_ERROR;
|
||||
|
||||
if(trans=='N')
|
||||
errval = rsb_spmv(RSB_TRANSPOSITION_N,&alfa,(struct rsb_mtx_t *)rsbMat,x,1,&beta,y,1);
|
||||
else
|
||||
errval = rsb_spmv(RSB_TRANSPOSITION_T,&alfa,(struct rsb_mtx_t *)rsbMat,x,1,&beta,y,1);
|
||||
|
||||
if(errval != RSB_ERR_NO_ERROR)
|
||||
{
|
||||
printf("Error performing a multiplication!\n");
|
||||
return 1;
|
||||
}
|
||||
|
||||
return 0;
|
||||
}
|
||||
|
||||
//Should it return a long instead of integer?
|
||||
int Rsb_getNZeros(void *rsbMat)
|
||||
{
|
||||
int res = 0;
|
||||
rsb_mtx_get_info((struct rsb_mtx_t *)rsbMat,RSB_MIF_MATRIX_NNZ__TO__RSB_NNZ_INDEX_T,(void *)&res);
|
||||
return res;
|
||||
}
|
||||
|
||||
void freeRsbMat(void *rsbMat)
|
||||
{
|
||||
rsb_mtx_free(rsbMat);
|
||||
}
|
||||
|
||||
#endif
|
||||
@ -1,2 +0,0 @@
|
||||
int Rsb_double_from_coo(void **rsbMat,double *va, int *ia,int *ja,int nnz,int nr,
|
||||
int nc, int br, int bc);
|
||||
@ -1,235 +0,0 @@
|
||||
! Parallel Sparse BLAS GPU plugin
|
||||
! (C) Copyright 2013
|
||||
!
|
||||
! Salvatore Filippone
|
||||
! Alessandro Fanfarillo
|
||||
!
|
||||
! Redistribution and use in source and binary forms, with or without
|
||||
! modification, are permitted provided that the following conditions
|
||||
! are met:
|
||||
! 1. Redistributions of source code must retain the above copyright
|
||||
! notice, this list of conditions and the following disclaimer.
|
||||
! 2. Redistributions in binary form must reproduce the above copyright
|
||||
! notice, this list of conditions, and the following disclaimer in the
|
||||
! documentation and/or other materials provided with the distribution.
|
||||
! 3. The name of the PSBLAS group or the names of its contributors may
|
||||
! not be used to endorse or promote products derived from this
|
||||
! software without specific written permission.
|
||||
!
|
||||
! THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
|
||||
! ``AS IS'' AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED
|
||||
! TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
|
||||
! PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE PSBLAS GROUP OR ITS CONTRIBUTORS
|
||||
! BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
|
||||
! CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
|
||||
! SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
|
||||
! INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
|
||||
! CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
|
||||
! ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
|
||||
! POSSIBILITY OF SUCH DAMAGE.
|
||||
!
|
||||
|
||||
|
||||
module rsb_mod
|
||||
use rsb
|
||||
use iso_c_binding
|
||||
|
||||
#ifdef HAVE_RSB
|
||||
|
||||
interface Rsb_from_coo
|
||||
function Rsb_double_from_coo(rsbMat,va,ia,ja,nnz,nr,nc,br,bc) &
|
||||
& result(res) bind(c,name='Rsb_double_from_coo')
|
||||
use iso_c_binding
|
||||
integer(c_int) :: res
|
||||
type(c_ptr) :: rsbMat
|
||||
real(c_double) :: va(*)
|
||||
integer(c_int) :: ia(*),ja(*)
|
||||
integer(c_int),value :: nnz,nr,nc,br,bc
|
||||
end function Rsb_double_from_coo
|
||||
end interface Rsb_from_coo
|
||||
|
||||
interface
|
||||
function Rsb_get_nzeros(rsbMat) &
|
||||
& result(res) bind(c,name='Rsb_getNZeros')
|
||||
use iso_c_binding
|
||||
integer(c_int) :: res
|
||||
type(c_ptr),value :: rsbMat
|
||||
end function Rsb_get_nzeros
|
||||
end interface
|
||||
|
||||
interface Rsb_spmv
|
||||
function Rsb_double_spmv(rsbMat,x,alfa,y,beta,trans) &
|
||||
& result(res) bind(c,name='Rsb_double_spmv')
|
||||
use iso_c_binding
|
||||
integer(c_int) :: res
|
||||
type(c_ptr),value :: rsbMat
|
||||
real(c_double) :: x(*),y(*)
|
||||
real(c_double),value :: alfa,beta
|
||||
character(c_char),value :: trans
|
||||
end function Rsb_double_spmv
|
||||
end interface Rsb_spmv
|
||||
|
||||
interface
|
||||
subroutine freeRsbMat(rsbMat) &
|
||||
& bind(c,name='freeRsbMat')
|
||||
use iso_c_binding
|
||||
type(c_ptr), value :: rsbMat
|
||||
end subroutine freeRsbMat
|
||||
end interface
|
||||
|
||||
! interface writeEllDevice
|
||||
|
||||
! function writeEllDeviceFloat(deviceMat,val,ja,ldj,irn) &
|
||||
! & result(res) bind(c,name='writeEllDeviceFloat')
|
||||
! use iso_c_binding
|
||||
! integer(c_int) :: res
|
||||
! type(c_ptr), value :: deviceMat
|
||||
! integer(c_int), value :: ldj
|
||||
! real(c_float) :: val(ldj,*)
|
||||
! integer(c_int) :: ja(ldj,*),irn(*)
|
||||
! end function writeEllDeviceFloat
|
||||
|
||||
! function writeEllDeviceDouble(deviceMat,val,ja,ldj,irn) &
|
||||
! & result(res) bind(c,name='writeEllDeviceDouble')
|
||||
! use iso_c_binding
|
||||
! integer(c_int) :: res
|
||||
! type(c_ptr), value :: deviceMat
|
||||
! integer(c_int), value :: ldj
|
||||
! real(c_double) :: val(ldj,*)
|
||||
! integer(c_int) :: ja(ldj,*),irn(*)
|
||||
! end function writeEllDeviceDouble
|
||||
|
||||
! function writeEllDeviceFloatComplex(deviceMat,val,ja,ldj,irn) &
|
||||
! & result(res) bind(c,name='writeEllDeviceFloatComplex')
|
||||
! use iso_c_binding
|
||||
! integer(c_int) :: res
|
||||
! type(c_ptr), value :: deviceMat
|
||||
! integer(c_int), value :: ldj
|
||||
! complex(c_float_complex) :: val(ldj,*)
|
||||
! integer(c_int) :: ja(ldj,*),irn(*)
|
||||
! end function writeEllDeviceFloatComplex
|
||||
|
||||
! function writeEllDeviceDoubleComplex(deviceMat,val,ja,ldj,irn) &
|
||||
! & result(res) bind(c,name='writeEllDeviceDoubleComplex')
|
||||
! use iso_c_binding
|
||||
! integer(c_int) :: res
|
||||
! type(c_ptr), value :: deviceMat
|
||||
! integer(c_int), value :: ldj
|
||||
! complex(c_double_complex) :: val(ldj,*)
|
||||
! integer(c_int) :: ja(ldj,*),irn(*)
|
||||
! end function writeEllDeviceDoubleComplex
|
||||
|
||||
! end interface writeEllDevice
|
||||
|
||||
! interface readEllDevice
|
||||
|
||||
! function readEllDeviceFloat(deviceMat,val,ja,ldj,irn) &
|
||||
! & result(res) bind(c,name='readEllDeviceFloat')
|
||||
! use iso_c_binding
|
||||
! integer(c_int) :: res
|
||||
! type(c_ptr), value :: deviceMat
|
||||
! integer(c_int), value :: ldj
|
||||
! real(c_float) :: val(ldj,*)
|
||||
! integer(c_int) :: ja(ldj,*),irn(*)
|
||||
! end function readEllDeviceFloat
|
||||
|
||||
! function readEllDeviceDouble(deviceMat,val,ja,ldj,irn) &
|
||||
! & result(res) bind(c,name='readEllDeviceDouble')
|
||||
! use iso_c_binding
|
||||
! integer(c_int) :: res
|
||||
! type(c_ptr), value :: deviceMat
|
||||
! integer(c_int), value :: ldj
|
||||
! real(c_double) :: val(ldj,*)
|
||||
! integer(c_int) :: ja(ldj,*),irn(*)
|
||||
! end function readEllDeviceDouble
|
||||
|
||||
! function readEllDeviceFloatComplex(deviceMat,val,ja,ldj,irn) &
|
||||
! & result(res) bind(c,name='readEllDeviceFloatComplex')
|
||||
! use iso_c_binding
|
||||
! integer(c_int) :: res
|
||||
! type(c_ptr), value :: deviceMat
|
||||
! integer(c_int), value :: ldj
|
||||
! complex(c_float_complex) :: val(ldj,*)
|
||||
! integer(c_int) :: ja(ldj,*),irn(*)
|
||||
! end function readEllDeviceFloatComplex
|
||||
|
||||
! function readEllDeviceDoubleComplex(deviceMat,val,ja,ldj,irn) &
|
||||
! & result(res) bind(c,name='readEllDeviceDoubleComplex')
|
||||
! use iso_c_binding
|
||||
! integer(c_int) :: res
|
||||
! type(c_ptr), value :: deviceMat
|
||||
! integer(c_int), value :: ldj
|
||||
! complex(c_double_complex) :: val(ldj,*)
|
||||
! integer(c_int) :: ja(ldj,*),irn(*)
|
||||
! end function readEllDeviceDoubleComplex
|
||||
|
||||
! end interface readEllDevice
|
||||
|
||||
! interface
|
||||
! subroutine resetEllTimer() bind(c,name='resetEllTimer')
|
||||
! use iso_c_binding
|
||||
! end subroutine resetEllTimer
|
||||
! end interface
|
||||
! interface
|
||||
! function getEllTimer() &
|
||||
! & bind(c,name='getEllTimer') result(res)
|
||||
! use iso_c_binding
|
||||
! real(c_double) :: res
|
||||
! end function getEllTimer
|
||||
! end interface
|
||||
|
||||
|
||||
! interface
|
||||
! function getEllDevicePitch(deviceMat) &
|
||||
! & bind(c,name='getEllDevicePitch') result(res)
|
||||
! use iso_c_binding
|
||||
! type(c_ptr), value :: deviceMat
|
||||
! integer(c_int) :: res
|
||||
! end function getEllDevicePitch
|
||||
! end interface
|
||||
|
||||
! interface
|
||||
! function getEllDeviceMaxRowSize(deviceMat) &
|
||||
! & bind(c,name='getEllDeviceMaxRowSize') result(res)
|
||||
! use iso_c_binding
|
||||
! type(c_ptr), value :: deviceMat
|
||||
! integer(c_int) :: res
|
||||
! end function getEllDeviceMaxRowSize
|
||||
! end interface
|
||||
|
||||
|
||||
! interface spmvEllDevice
|
||||
! function spmvEllDeviceFloat(deviceMat,alpha,x,beta,y) &
|
||||
! & result(res) bind(c,name='spmvEllDeviceFloat')
|
||||
! use iso_c_binding
|
||||
! integer(c_int) :: res
|
||||
! type(c_ptr), value :: deviceMat, x, y
|
||||
! real(c_float),value :: alpha, beta
|
||||
! end function spmvEllDeviceFloat
|
||||
! function spmvEllDeviceDouble(deviceMat,alpha,x,beta,y) &
|
||||
! & result(res) bind(c,name='spmvEllDeviceDouble')
|
||||
! use iso_c_binding
|
||||
! integer(c_int) :: res
|
||||
! type(c_ptr), value :: deviceMat, x, y
|
||||
! real(c_double),value :: alpha, beta
|
||||
! end function spmvEllDeviceDouble
|
||||
! function spmvEllDeviceFloatComplex(deviceMat,alpha,x,beta,y) &
|
||||
! & result(res) bind(c,name='spmvEllDeviceFloatComplex')
|
||||
! use iso_c_binding
|
||||
! integer(c_int) :: res
|
||||
! type(c_ptr), value :: deviceMat, x, y
|
||||
! complex(c_float_complex),value :: alpha, beta
|
||||
! end function spmvEllDeviceFloatComplex
|
||||
! function spmvEllDeviceDoubleComplex(deviceMat,alpha,x,beta,y) &
|
||||
! & result(res) bind(c,name='spmvEllDeviceDoubleComplex')
|
||||
! use iso_c_binding
|
||||
! integer(c_int) :: res
|
||||
! type(c_ptr), value :: deviceMat, x, y
|
||||
! complex(c_double_complex),value :: alpha, beta
|
||||
! end function spmvEllDeviceDoubleComplex
|
||||
! end interface spmvEllDevice
|
||||
|
||||
#endif
|
||||
|
||||
|
||||
end module rsb_mod
|
||||
Loading…
Reference in New Issue