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Added test directory, populated with benchmark code.

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stopcriterion
Salvatore Filippone 17 years ago
parent 6742f1e24b
commit 6cb0e5cbfa
7 changed files with 1140 additions and 0 deletions
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52
test/fileread/Makefile
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#PSBLAS_DIR=../psblas2-dev
#include $(PSBLAS_DIR)/Make.inc
#
# Libraries used
#
#LIBDIR=$(PSBLAS_DIR)/lib/
MLDDIR=../..
include $(MLDDIR)/Make.inc
PSBDIR=$(PSBLASDIR)/lib/
MLDLIBDIR=$(MLDDIR)/lib
MLD_LIB=-L$(MLDLIBDIR) -lmld_krylov -lmld_prec
PSBLAS_LIB= -L$(PSBDIR) -lpsb_util -lpsb_base
INCDIRS=-I$(MLDLIBDIR) -I$(PSBDIR)
DFOBJS=precdata.o getp.o df_bench.o enablecore.o
ZFOBJS=precdata.o getp.o zf_bench.o enablecore.o
EXEDIR=./runs
all: df_bench zf_bench
df_bench.o zf_bench.o: getp.o
getp.o: precdata.o
df_bench: $(DFOBJS)
$(F90LINK) $(LINKOPT) $(DFOBJS) -o df_bench \
$(MLD_LIB) $(PSBLAS_LIB) $(LDLIBS)
/bin/mv df_bench $(EXEDIR)
zf_bench: $(ZFOBJS)
$(F90LINK) $(LINKOPT) $(ZFOBJS) -o zf_bench \
$(MLD_LIB) $(PSBLAS_LIB) $(LDLIBS)
/bin/mv zf_bench $(EXEDIR)
.f90.o:
$(MPF90) $(F90COPT) $(INCDIRS) -c $<
#mmio.o: mmio.f90
# $(MPF90) -O0 $(INCDIRS) -c $<
#$(DFLOBJS) $(ZFOBJS) $(DFOBJS):$(MODS)
clean:
/bin/rm -f $(DFOBJS) $(ZFOBJS) \
*$(.mod) $(EXEDIR)/df_bench $(EXEDIR)/zf_bench
lib:
(cd ../../; make library)
verycleanlib:
(cd ../../; make veryclean)

411
test/fileread/df_bench.f90
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program df_bench
use getp
use precd
use psb_base_mod
use psb_util_mod
use mld_prec_mod
use psb_krylov_mod
implicit none
! input parameters
character(len=20) :: cmethd
character(len=80) :: outf1, outf2, outf3
character(len=20), allocatable :: mtrx(:),rhs(:)
type(precdata), allocatable :: precs(:)
! sparse matrices
type(psb_dspmat_type) :: a, aux_a
! preconditioner data
type(mld_dprec_type) :: pre
integer :: igsmth, matop, novr
! dense matrices
real(kind(1.d0)), allocatable, target :: aux_b(:,:), d(:)
real(kind(1.d0)), allocatable , save :: b_col(:), x_col(:), r_col(:), &
& x_col_glob(:), r_col_glob(:)
real(kind(1.d0)), pointer :: b_col_glob(:)
! communications data structure
type(psb_desc_type):: desc_a
! blacs variables
integer :: ictxt, iam, np, root
logical :: amroot, out1, out2
! solver paramters
integer :: iter, itmax, ierr, itrace, ircode, ipart,nlev,&
& methd, istopc, iprec, ml, irnum, irst, ntry, nmat, ilev,ipsize,asize,cdsize
real(kind(1.d0)) :: err, eps
character(len=5) :: afmt
character(len=20) :: name
integer :: iparm(20)
! other variables
integer :: i,info,j,m_problem, nm, nt
integer :: internal, m,ii,nnzero, nprecs, pp
real(kind(1.d0)) :: t1, t2, tprec, r_amax, b_amax,&
&scale,resmx,resmxp, mttot, mtslv, mtprec
integer :: nrhs, nrow, n_row, dim, nv, ne
integer, allocatable :: ipv(:), neigh(:), ivg(:)
call psb_init(ictxt)
call psb_info(ictxt,iam,np)
if (iam < 0) then
! This should not happen, but just in case
call psb_exit(ictxt)
stop
endif
call enablecore()
root = 0
amroot = (iam==root)
name='df_sample'
if(psb_get_errstatus() /= 0) goto 9999
info=0
call psb_set_errverbosity(2)
call psb_set_erraction(psb_act_abort_)
!!$ call psb_cd_set_large_threshold(512)
!!$ call psb_cd_set_large_threshold(2)
!!$ write(0,*) iam,'Main: large threshold ',psb_cd_get_large_threshold()
!
! get parameters
!
call get_parms(ictxt,irst,irnum,ntry,nmat,mtrx,rhs,cmethd,nprecs,precs,&
& ipart,afmt,istopc,itmax,itrace,eps,outf1,outf2)
if(amroot) then
if(outf1 /= 'NONE') then
open(8,file=outf1,action='write')
out1=.true.
else
out1=.false.
end if
if(outf2 /= 'NONE') then
open(10,file=outf2,action='write')
out2=.true.
else
out2=.false.
end if
end if
do nm=1, nmat
if(amroot) write(*,'(25("=")," ",a20," ",25("="))')mtrx(nm)
call psb_barrier(ictxt)
t1 = psb_wtime()
! read the input matrix to be processed and (possibly) the rhs
nrhs = 1
if (amroot) then
call read_mat(mtrx(nm), aux_a, ictxt)
m_problem = aux_a%m
call psb_bcast(ictxt,m_problem,root)
if(rhs(nm) /= 'none') then
! reading an rhs
call read_rhs(rhs(nm),aux_b,ictxt)
end if
if (allocated(aux_b).and.size(aux_b,1)==m_problem) then
! if any rhs were present, broadcast the first one
b_col_glob =>aux_b(:,1)
else
allocate(aux_b(m_problem,1), stat=ircode)
if (ircode /= 0) then
call psb_errpush(4000,name)
goto 9999
endif
b_col_glob => aux_b(:,1)
do i=1, m_problem
b_col_glob(i) = 1.d0
enddo
endif
call psb_bcast(ictxt,b_col_glob(1:m_problem),root)
else
call psb_bcast(ictxt,m_problem,root)
allocate(aux_b(m_problem,1), stat=ircode)
if (ircode /= 0) then
call psb_errpush(4000,name)
goto 9999
endif
b_col_glob =>aux_b(:,1)
call psb_bcast(ictxt,b_col_glob(1:m_problem),root)
end if
! switch over different partition types
if (ipart == 0) then
call psb_barrier(ictxt)
! if (amroot) write(*,'("Partition type: block")')
allocate(ivg(m_problem),ipv(np))
if (.true.) then
do i=1,m_problem
call part_block(i,m_problem,np,ipv,nv)
ivg(i) = ipv(1)
enddo
call psb_matdist(aux_a, a, ivg, ictxt, &
& desc_a,b_col_glob,b_col,info,fmt=afmt)
else
call psb_matdist(aux_a, a, part_block, ictxt, &
& desc_a,b_col_glob,b_col,info,fmt=afmt)
end if
else if (ipart == 2) then
if (amroot) then
call build_mtpart(aux_a%m,aux_a%fida,aux_a%ia1,aux_a%ia2,np)
endif
call psb_barrier(ictxt)
call distr_mtpart(0,ictxt)
call getv_mtpart(ivg)
call psb_matdist(aux_a, a, ivg, ictxt, &
& desc_a,b_col_glob,b_col,info,fmt=afmt)
call free_part(info)
else
call psb_matdist(aux_a, a, part_block, ictxt, &
& desc_a,b_col_glob,b_col,info,fmt=afmt)
end if
!!$ open(20+iam)
!!$ call psb_cdprt(20+iam,desc_a,short=.false.)
!!$ close(20+iam)
!!$ write(0,*) iam,'After CDPRT '
!!$ call flush(0)
!!$ call flush(6)
!!$ call psb_barrier(ictxt)
call psb_geall(x_col,desc_a,info)
x_col(:) =0.0
call psb_geasb(x_col,desc_a,info)
call psb_geall(r_col,desc_a,info)
r_col(:) =0.0
call psb_geasb(r_col,desc_a,info)
t2 = psb_wtime() - t1
!!$ call psb_csprt(10+iam,a,head='% (A)')
call psb_sp_free(aux_a,info)
call psb_amx(ictxt, t2)
!!$ call psb_csprt(20+iam,a,head='% (A)')
!
! prepare the preconditioning matrix. note the availability
! of optional parameters
!
do pp=1, nprecs
mttot=1.d300
do nt=1,ntry
if (precs(pp)%lv2(1:2) == 'ml') then
if (precs(pp)%nlev < 2) then
write(0,*) 'Inconsistent number of levels ',precs(pp)%nlev,&
& ' forcing 2'
precs(pp)%nlev = 2
end if
nlev = precs(pp)%nlev
call mld_precinit(pre,precs(pp)%lv2,info,nlev=nlev)
! Defaults are OK for all intermediate levels. Only fix last level.
if (precs(pp)%omega>=0.0) then
call mld_precset(pre,aggr_damp_,precs(pp)%omega,info,ilev=nlev)
end if
call mld_precset(pre,ml_type_, precs(pp)%mltype, info,ilev=nlev)
call mld_precset(pre,aggr_alg_, precs(pp)%aggr, info,ilev=nlev)
call mld_precset(pre,coarse_mat_, precs(pp)%cmat, info,ilev=nlev)
call mld_precset(pre,smooth_pos_, precs(pp)%smthpos, info,ilev=nlev)
call mld_precset(pre,sub_solve_, precs(pp)%ftype2, info,ilev=nlev)
call mld_precset(pre,smooth_sweeps_, precs(pp)%jswp, info,ilev=nlev)
call mld_precset(pre,aggr_kind_, precs(pp)%smthkind,info,ilev=nlev)
else
call mld_precinit(pre,precs(pp)%lv1,info)
end if
call mld_precset(pre,n_ovr_, precs(pp)%novr,info ,ilev=1)
call mld_precset(pre,sub_restr_, precs(pp)%restr,info ,ilev=1)
call mld_precset(pre,sub_prol_, precs(pp)%prol,info ,ilev=1)
call mld_precset(pre,sub_solve_, precs(pp)%ftype1,info ,ilev=1)
! setting initial guess to zero
call psb_geaxpby(dzero,b_col,dzero,x_col,desc_a,info)
! building the preconditioner
!!$ write(0,*) 'Check in main program on hasv in:',allocated(desc_a%hashv)
!!$ call flush(0)
call psb_barrier(ictxt)
t1 = psb_wtime()
call mld_precbld(a,desc_a,pre,info)
tprec = psb_wtime()-t1
if (info /= 0) then
write(0,*) 'INFO from precbld ',info
call psb_error()
goto 9999
end if
if (psb_get_errstatus() /= 0) then
write(0,*) 'INFO from precbld ',info
call psb_error()
goto 9999
end if
!!$ write(0,*) 'Check in main program on hasv out:',allocated(desc_a%hashv)
!!$ call flush(0)
call psb_amx(ictxt,tprec)
!!$ call psb_csprt(40+iam,a,head='% (A)')
!!$ if (amroot) then
!!$ write(*,'("Matrix : ",a)') mtrx(nm)
!!$ write(*,'("RHS : ",a)') rhs(nm)
!!$ write(*,'("Method : ",a)') cmethd
!!$ write(*,'("Preconditioner : ",a)') precs(pp)%descr
!!$ call mld_prec_descr(6,pre)
!!$ call flush(6)
!!$ end if
iparm = 0
call psb_barrier(ictxt)
t1 = psb_wtime()
call psb_krylov(cmethd,a,pre,b_col,x_col,eps,desc_a,info,&
& itmax=itmax,iter=iter,err=err,itrace=itrace,&
& irst=irst,istop=istopc)
call psb_barrier(ictxt)
t2 = psb_wtime() - t1
call psb_amx(ictxt,t2)
if (info/=0) then
write(0,*) 'INFO from solver ',info
call psb_errpush(4010,name,a_err='psb_SOLVER')
goto 9999
end if
!!$ write(0,*) iam,'Done Solver'
!!$ call flush(0)
!!$ call flush(6)
!!$ call psb_barrier(ictxt)
if(amroot.and.out2) &
& write(10,'(a20,2(1x,i3),1x,i5,3(1x,g9.4),1x,a8,1x,a)') &
& mtrx(nm),np,precs(pp)%novr,iter,tprec,t2,t2+tprec,&
& trim(cmethd),trim(precs(pp)%descr)
if(amroot) &
& write(0,'(a20,2(1x,i3),1x,i5,3(1x,g9.4),1x,a8,1x,a)') &
& mtrx(nm),np,precs(pp)%novr,iter,tprec,t2,t2+tprec,&
& trim(cmethd),trim(precs(pp)%descr)
call flush(0)
if (nt.lt.ntry) call mld_precfree(pre,info)
if((t2+tprec).lt.mttot) then
mtslv=t2
mtprec=tprec
mttot=t2+tprec
end if
end do
!!$ call psb_csprt(50+iam,a,head='% (A)')
!!$ write(0,*) 'Check hashv after precfree:',allocated(desc_a%hashv)
!!$ call flush(0)
call psb_geaxpby(done,b_col,dzero,r_col,desc_a,info)
call psb_spmm(-done,a,x_col,done,r_col,desc_a,info)
call psb_genrm2s(resmx,r_col,desc_a,info)
call psb_geamaxs(resmxp,r_col,desc_a,info)
ipsize = mld_sizeof(pre)
asize = psb_sizeof(a)
cdsize = psb_sizeof(desc_a)
call psb_sum(ictxt,ipsize)
call psb_sum(ictxt,asize)
call psb_sum(ictxt,cdsize)
if (amroot) then
write(*,'("Matrix : ",a)') mtrx(nm)
write(*,'("RHS : ",a)') rhs(nm)
write(*,'("Method : ",a)') cmethd
write(*,'("Preconditioner : ",a)') precs(pp)%descr
call mld_prec_descr(pre)
write(*,'("Computed solution on ",i4," processors")')np
write(*,'(" ")')
write(*,'("Iterations to convergence: ",i6)') iter
write(*,'("Error indicator on exit : ",g9.4)') err
write(*,'("Time to buil prec. : ",es10.4)')mtprec
write(*,'("Time to solve matrix : ",es10.4)')mtslv
write(*,'("Time per iteration : ",es10.4)')mtslv/(iter)
write(*,'("Total time : ",es10.4)')mttot
write(*,'("Residual norm 2 : ",es10.4)')resmx
write(*,'("Residual norm inf : ",es10.4)')resmxp
write(*,'("Total memory occupation for A: ",i10)')asize
write(*,'("Total memory occupation for DESC_A: ",i10)')cdsize
write(*,'("Total memory occupation for PRE: ",i10)')ipsize
write(*,'(72("="))')
write(*,'(" ")')
write(*,'(" ")')
write(*,'(" ")')
if(out1) write(8,'(a20,2(1x,i3),1x,i5,5(1x,g9.4),1x,a8,1x,a)') mtrx(nm),&
& np,precs(pp)%novr,&
& iter,mtprec,mtslv,mttot,resmx,resmxp,&
& trim(cmethd),trim(precs(pp)%descr)
end if
call mld_precfree(pre,info)
if (.false.) then
allocate(x_col_glob(m_problem),r_col_glob(m_problem),stat=ierr)
if (ierr.ne.0) then
write(0,*) 'allocation error: no data collection'
else
call psb_gather(x_col_glob,x_col,desc_a,info,root=0)
call psb_gather(r_col_glob,r_col,desc_a,info,root=0)
if (amroot) then
write(0,'(" ")')
write(0,'("Saving x on file")')
write(outf3,'(a,a,a)')trim(mtrx(nm)),'.psb_sol.',&
& tolower(trim(precs(pp)%descr))
open(20,file=outf3)
write(20,*) 'matrix: ',mtrx(nm)
write(20,*) 'computed solution on ',np,' processors.'
write(20,*) 'iterations to convergence: ',iter
write(20,*) 'error indicator (infinity norm) on exit:', &
& ' ||r||/(||a||||x||+||b||) = ',err
write(20,*) 'max residual = ',resmx, resmxp
do i=1,m_problem
write(20,998) i,x_col_glob(i),b_col_glob(i)
enddo
close(20)
end if
end if
end if
998 format(i8,4(2x,g20.14))
993 format(i6,4(1x,e12.6))
!!$ if (pp == 1) call psb_csprt(40+iam,a,head='% (A)')
end do
call psb_gefree(b_col, desc_a,info)
call psb_gefree(x_col, desc_a,info)
call psb_spfree(a, desc_a,info)
write(0,*) 'Final cdfree'
call flush(0)
call psb_cdfree(desc_a,info)
deallocate(r_col,stat=info)
deallocate(aux_b,stat=info)
if (ipart==0) then
deallocate(ivg,ipv,stat=info)
endif
end do
9999 continue
if(info /= 0) then
call psb_error(ictxt)
end if
call psb_exit(ictxt)
stop
end program df_bench

23
test/fileread/enablecore.c
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#include <sys/resource.h>
#include <unistd.h>
#include <signal.h>
#ifdef Add_
#define enablecore enablecore_
#endif
#ifdef AddDouble_
#define enablecore enablecore_
#endif
#ifdef UpCase
#define enablecore ENABLECORE_
#endif
void enablecore()
{
struct rlimit rlim;
getrlimit(RLIMIT_CORE, &rlim);
rlim.rlim_cur = RLIM_INFINITY;
setrlimit(RLIMIT_CORE, &rlim);
signal(SIGSEGV, SIG_DFL);
}

206
test/fileread/getp.f90
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module getp
public get_parms
public pr_usage
contains
!
! get iteration parameters from standard input
!
subroutine get_parms(icontxt,irst,irnum,ntry,nmat,mtrx,rhs,cmethd,nprecs,precs,ipart,&
& afmt,istopc,itmax,itrace,eps,outf1,outf2)
use psb_base_mod
use precd
implicit none
integer :: icontxt
character(len=20) :: cmethd
character(len=80) :: outf1, outf2
character(len=20),allocatable :: mtrx(:), rhs(:)
type(precdata),allocatable :: precs(:)
integer :: iret, istopc,itmax,itrace,ipart,nmat,nprecs,irst,irnum,ntry
character(len=1024) :: charbuf
real(kind(1.d0)) :: eps, omega
character :: afmt*5, lv1*10, lv2*10, pdescr*40
integer :: iam, nm, np, i, idx
integer, parameter :: npparms=12
integer :: inparms(40), ip, pparms(npparms)
call psb_info(icontxt,iam,np)
if (iam==0) then
! read input parameters
read(*,*) outf1
read(*,*) outf2
read(*,*) cmethd
read(*,*) eps
read(*,*) afmt
call psb_bcast(icontxt,cmethd)
call psb_bcast(icontxt,eps,0)
call psb_bcast(icontxt,afmt)
read(*,*) ipart
read(*,*) itmax
read(*,*) itrace
read(*,*) istopc
read(*,*) irst
read(*,*) irnum
read(*,*) ntry
read(*,*) nprecs
! broadcast parameters to all processors
inparms(1) = ipart
inparms(2) = itmax
inparms(3) = itrace
inparms(4) = istopc
inparms(5) = irst
inparms(6) = irnum
inparms(7) = ntry
call psb_bcast(icontxt,inparms(1:7),0)
call psb_bcast(icontxt,nprecs,0)
allocate(precs(nprecs))
do np=1,nprecs
read(*,'(a)')charbuf
charbuf = adjustl(charbuf)
idx=index(charbuf," ")
read(charbuf(1:idx-1),'(a)')lv1
charbuf=adjustl(charbuf(idx:))
idx=index(charbuf," ")
read(charbuf(1:idx-1),'(a)')lv2
charbuf=adjustl(charbuf(idx:))
do i=1, npparms
idx=index(charbuf," ")
read(charbuf(1:idx),*) pparms(i)
charbuf=adjustl(charbuf(idx:))
end do
idx=index(charbuf," ")
read(charbuf(1:idx),*) omega
charbuf=adjustl(charbuf(idx:))
read(charbuf,'(a)') pdescr
call psb_bcast(icontxt,pdescr)
precs(np)%descr=pdescr
call psb_bcast(icontxt,lv1)
call psb_bcast(icontxt,lv2)
call psb_bcast(icontxt,pparms(1:npparms),0)
call psb_bcast(icontxt,omega,0)
precs(np)%lv1 = lv1
precs(np)%lv2 = lv2
precs(np)%novr = pparms(1)
precs(np)%restr = pparms(2)
precs(np)%prol = pparms(3)
precs(np)%ftype1 = pparms(4)
precs(np)%mltype = pparms(5)
precs(np)%aggr = pparms(6)
precs(np)%smthkind = pparms(7)
precs(np)%cmat = pparms(8)
precs(np)%smthpos = pparms(9)
precs(np)%ftype2 = pparms(10)
precs(np)%jswp = pparms(11)
precs(np)%nlev = pparms(12)
precs(np)%omega = omega
end do
read(*,*) nmat
call psb_bcast(icontxt,nmat,0)
allocate(mtrx(nmat),rhs(nmat))
do nm=1, nmat
read(*,'(a)') charbuf
charbuf=adjustl(charbuf)
idx=index(charbuf," ")
mtrx(nm)=charbuf(1:idx-1)
rhs(nm)=adjustl(charbuf(idx+1:))
call psb_bcast(icontxt,mtrx(nm))
call psb_bcast(icontxt,rhs(nm))
end do
else
! receive parameters
call psb_bcast(icontxt,cmethd)
call psb_bcast(icontxt,eps)
call psb_bcast(icontxt,afmt)
call psb_bcast(icontxt,inparms(1:7))
ipart = inparms(1)
itmax = inparms(2)
itrace = inparms(3)
istopc = inparms(4)
irst = inparms(5)
irnum = inparms(6)
ntry = inparms(7)
call psb_bcast(icontxt,nprecs)
allocate(precs(nprecs))
do np=1,nprecs
call psb_bcast(icontxt,pdescr)
precs(np)%descr=pdescr
call psb_bcast(icontxt,lv1)
call psb_bcast(icontxt,lv2)
call psb_bcast(icontxt,pparms(1:npparms))
call psb_bcast(icontxt,omega)
precs(np)%lv1 = lv1
precs(np)%lv2 = lv2
precs(np)%novr = pparms(1)
precs(np)%restr = pparms(2)
precs(np)%prol = pparms(3)
precs(np)%ftype1 = pparms(4)
precs(np)%mltype = pparms(5)
precs(np)%aggr = pparms(6)
precs(np)%smthkind = pparms(7)
precs(np)%cmat = pparms(8)
precs(np)%smthpos = pparms(9)
precs(np)%ftype2 = pparms(10)
precs(np)%jswp = pparms(11)
precs(np)%nlev = pparms(12)
precs(np)%omega = omega
end do
call psb_bcast(icontxt,nmat)
allocate(mtrx(nmat),rhs(nmat))
do nm=1,nmat
call psb_bcast(icontxt,mtrx(nm))
call psb_bcast(icontxt,rhs(nm))
end do
end if
end subroutine get_parms
subroutine pr_usage(iout)
integer iout
write(iout, *) ' number of parameters is incorrect!'
write(iout, *) ' use: hb_sample mtrx_file methd prec [ptype &
&itmax istopc itrace]'
write(iout, *) ' where:'
write(iout, *) ' mtrx_file is stored in hb format'
write(iout, *) ' methd may be: cgstab '
write(iout, *) ' prec may be: ilu diagsc none'
write(iout, *) ' ptype partition strategy default 0'
write(iout, *) ' 0: block partition '
write(iout, *) ' itmax max iterations [500] '
write(iout, *) ' istopc stopping criterion [1] '
write(iout, *) ' itrace 0 (no tracing, default) or '
write(iout, *) ' >= 0 do tracing every itrace'
write(iout, *) ' iterations '
end subroutine pr_usage
end module getp

22
test/fileread/precdata.f90
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module precd
type precdata
character(len=10) :: lv1, lv2 ! First and second level prec type
integer :: nlev
integer :: novr ! number of overlapping levels
integer :: restr ! restriction over application of as
integer :: prol ! prolongation over application of as
integer :: ftype1 ! Factorization type: ILU, SuperLU, UMFPACK.
integer :: mltype ! additive or multiplicative 2nd level prec
integer :: aggr ! local or global aggregation
integer :: smthkind ! smoothing type
integer :: cmat ! coarse mat
integer :: smthpos ! pre, post, both smoothing
integer :: glbsmth ! global smoothing
integer :: ftype2 ! Factorization type: ILU, SuperLU, UMFPACK.
integer :: jswp ! jacobi sweeps
real(kind(1.d0)) :: omega ! smoother omega
character(len=40) :: descr ! verbose description of the prec
end type precdata
end module precd

84
test/fileread/runs/drt.sh
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#!/bin/sh
#
#
# NUmber of attempts for each configuration
ntry=1
date=`date +%Y%m%d%H%M%S`
for np in $*
do
# 3rd batch: 14bis,64bis 4 sweeps
echo "mpirun -np $np -machinefile locm df_bench >>log.part$part.ren$renum.${np}p"
#/usr/local/mpich-gcc42/bin/mpirun -np $np -machinefile locm df_bench <<EOF
/usr/local/mpich-gcc42/bin/mpirun -np $np -machinefile locm df_bench >>run.gfc.kiva.log.${np}p.$date 2>err.gfc.kiva.log.${np}p.$date <<EOF
out.${np}p.$date Out file 1: summary
stat.${np}p.$date Out file 2: detailed for statistics
BICGSTAB iterative method to use
1.D-6 EPS
CSR Matrix format
0 IPART: Partition method: 0: BLOCK 1: BLK2 2:GRAPH
00250 ITMAX
-1 ITRACE
2 ISTOPC 1: NBE Infty 2: |r|2/|b|2
30 IRST Restart parameter for GMRES and BiCGSTAB(L)
0 RENUM: 0: none 1: global indices (2: GPS band reduction)
$ntry NTRY for each comb. print out best timings
30 NPRCS/nov rstr prol fty1 mlty agg smth cm smp fty2 jswp nl omg
noprec none 0 0 0 0 0 0 0 0 0 0 0 1 -1.0 NOPREC
diag none 0 0 0 1 2 0 1 0 2 1 4 1 -1.0 DIAG
bjac none 0 0 0 1 2 0 1 0 2 1 4 1 -1.0 BJAC
as none 0 1 0 1 2 0 1 0 2 1 4 1 -1.0 RAS
as none 1 1 0 1 2 0 1 0 2 1 4 1 -1.0 RAS
as none 2 1 0 1 2 0 1 0 2 1 4 1 -1.0 RAS
as ml 0 1 0 1 2 0 1 0 2 1 4 2 -1.0 2L-M-RAS-I-D4
as ml 1 1 0 1 2 0 1 0 2 1 4 2 -1.0 2L-M-RAS-I-D4
as ml 2 1 0 1 2 0 1 0 2 1 4 2 -1.0 2L-M-RAS-I-D4
as ml 0 1 0 1 2 0 1 0 2 5 4 2 -1.0 2L-M-RAS-U-D4
as ml 1 1 0 1 2 0 1 0 2 5 4 2 -1.0 2L-M-RAS-U-D4
as ml 2 1 0 1 2 0 1 0 2 5 4 2 -1.0 2L-M-RAS-U-D4
as ml 0 1 0 1 2 0 1 0 2 1 4 3 -1.0 3L-M-RAS-I-D4
as ml 1 1 0 1 2 0 1 0 2 1 4 3 -1.0 3L-M-RAS-I-D4
as ml 2 1 0 1 2 0 1 0 2 1 4 3 -1.0 3L-M-RAS-I-D4
as ml 0 1 0 1 2 0 1 0 2 5 4 3 -1.0 3L-M-RAS-U-D4
as ml 1 1 0 1 2 0 1 0 2 5 4 3 -1.0 3L-M-RAS-U-D4
as ml 2 1 0 1 2 0 1 0 2 5 4 3 -1.0 3L-M-RAS-U-D4
as ml 0 1 0 1 2 0 1 1 2 1 1 2 -1.0 2L-M-RAS-I-R
as ml 1 1 0 1 2 0 1 1 2 1 1 2 -1.0 2L-M-RAS-I-R
as ml 2 1 0 1 2 0 1 1 2 1 1 2 -1.0 2L-M-RAS-I-R
as ml 0 1 0 1 2 0 1 1 2 5 1 2 -1.0 2L-M-RAS-U-R
as ml 1 1 0 1 2 0 1 1 2 5 1 2 -1.0 2L-M-RAS-U-R
as ml 2 1 0 1 2 0 1 1 2 5 1 2 -1.0 2L-M-RAS-U-R
as ml 0 1 0 1 2 0 1 1 2 1 1 3 -1.0 3L-M-RAS-I-R
as ml 1 1 0 1 2 0 1 1 2 1 1 3 -1.0 3L-M-RAS-I-R
as ml 2 1 0 1 2 0 1 1 2 1 1 3 -1.0 3L-M-RAS-I-R
as ml 0 1 0 1 2 0 1 1 2 5 1 3 -1.0 3L-M-RAS-U-R
as ml 1 1 0 1 2 0 1 1 2 5 1 3 -1.0 3L-M-RAS-U-R
as ml 2 1 0 1 2 0 1 1 2 5 1 3 -1.0 3L-M-RAS-U-R
2 Number of matrices
thm50x30.mtx none
thm200x120.mtx none
thm1000x600.mtx none
a400x400.mtx b400.mtx
kivap004.mtx none
kivap001.mtx none
kivap007.mtx none
!!! preconditioner templates
bja none 0 0 0 0 0 0 0 0 0 0 0 0.0 Block Jacobi
none none 0 0 0 0 0 0 0 0 0 0 0 0.1 No preconditioner
diagsc none 0 0 0 0 0 0 0 0 0 0 0 0.0 Diagonal scaling
as none 1 4 1 0 0 0 0 0 0 0 0 0.0 Additive Schwarz 1 overlap
as none 1 4 0 0 0 0 0 0 0 0 0 0.0 Restricted Additive Schwarz 1 overlap
EOF
cat out.${np}p.$date >>dat.out.kiva.$date
cat stat.${np}p.$date >>dat.stat.kiva.$date
done

342
test/fileread/zf_bench.f90
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program zf_bench
use precd
use getp
use psb_base_mod
use psb_util_mod
use mld_prec_mod
use psb_krylov_mod
implicit none
! input parameters
character(len=20) :: cmethd
character(len=80) :: outf1, outf2, outf3
character(len=20), allocatable :: mtrx(:),rhs(:)
type(precdata), allocatable :: precs(:)
! sparse matrices
type(psb_zspmat_type) :: a, aux_a
! preconditioner data
type(mld_zprec_type) :: pre
integer :: igsmth, matop, novr
! dense matrices
complex(kind(1.d0)), allocatable, target :: aux_b(:,:), d(:)
complex(kind(1.d0)), allocatable , save :: b_col(:), x_col(:), r_col(:), &
& x_col_glob(:), r_col_glob(:)
complex(kind(1.d0)), pointer :: b_col_glob(:)
! communications data structure
type(psb_desc_type):: desc_a
! blacs variables
integer :: ictxt, iam, np, root
logical :: amroot, out1, out2
! solver paramters
integer :: iter, itmax, ierr, itrace, ircode, ipart,&
& methd, istopc, iprec, ml, irnum, irst, ntry, nmat, ilev,nlev
real(kind(1.d0)) :: err, eps
character(len=5) :: afmt
character(len=20) :: name
integer :: iparm(20)
! other variables
integer :: i,info,j,m_problem, nm, nt
integer :: internal, m,ii,nnzero, nprecs, pp
real(kind(1.d0)) :: t1, t2, tprec, r_amax, b_amax,&
&scale,resmx,resmxp, mttot, mtslv, mtprec
integer :: nrhs, nrow, n_row, dim, nv, ne
integer, allocatable :: ipv(:), neigh(:), ivg(:)
call psb_init(ictxt)
call psb_info(ictxt,iam,np)
if (iam < 0) then
! This should not happen, but just in case
call psb_exit(ictxt)
stop
endif
call enablecore()
root = 0
amroot = (iam==root)
name='df_sample'
if(psb_get_errstatus() /= 0) goto 9999
info=0
call psb_set_errverbosity(2)
call psb_set_erraction(psb_act_abort_)
!
! get parameters
!
call get_parms(ictxt,irst,irnum,ntry,nmat,mtrx,rhs,cmethd,nprecs,precs,&
& ipart,afmt,istopc,itmax,itrace,eps,outf1,outf2)
if(amroot) then
if(outf1 /= 'NONE') then
open(8,file=outf1,action='write')
out1=.true.
else
out1=.false.
end if
if(outf2 /= 'NONE') then
open(10,file=outf2,action='write')
out2=.true.
else
out2=.false.
end if
end if
do nm=1, nmat
if(amroot) write(*,'(25("=")," ",a20," ",25("="))')mtrx(nm)
call psb_barrier(ictxt)
t1 = psb_wtime()
! read the input matrix to be processed and (possibly) the rhs
nrhs = 1
if (amroot) then
call read_mat(mtrx(nm), aux_a, ictxt)
m_problem = aux_a%m
call psb_bcast(ictxt,m_problem,root)
if(rhs(nm) /= 'none') then
! reading an rhs
call read_rhs(rhs(nm),aux_b,ictxt)
end if
if (allocated(aux_b).and.size(aux_b,1)==m_problem) then
! if any rhs were present, broadcast the first one
b_col_glob =>aux_b(:,1)
else
allocate(aux_b(m_problem,1), stat=ircode)
if (ircode /= 0) then
call psb_errpush(4000,name)
goto 9999
endif
b_col_glob => aux_b(:,1)
do i=1, m_problem
b_col_glob(i) = 1.d0
enddo
endif
call psb_bcast(ictxt,b_col_glob(1:m_problem),root)
else
call psb_bcast(ictxt,m_problem,root)
allocate(aux_b(m_problem,1), stat=ircode)
if (ircode /= 0) then
call psb_errpush(4000,name)
goto 9999
endif
b_col_glob =>aux_b(:,1)
call psb_bcast(ictxt,b_col_glob(1:m_problem),root)
end if
! switch over different partition types
if (ipart == 0) then
call psb_barrier(ictxt)
! if (amroot) write(*,'("Partition type: block")')
allocate(ivg(m_problem),ipv(np))
do i=1,m_problem
call part_block(i,m_problem,np,ipv,nv)
ivg(i) = ipv(1)
enddo
call psb_matdist(aux_a, a, ivg, ictxt, &
& desc_a,b_col_glob,b_col,info,fmt=afmt)
else if (ipart == 2) then
if (amroot) then
call build_mtpart(aux_a%m,aux_a%fida,aux_a%ia1,aux_a%ia2,np)
endif
call psb_barrier(ictxt)
call distr_mtpart(0,ictxt)
call getv_mtpart(ivg)
call psb_matdist(aux_a, a, ivg, ictxt, &
& desc_a,b_col_glob,b_col,info,fmt=afmt)
call free_part(info)
else
call psb_matdist(aux_a, a, part_block, ictxt, &
& desc_a,b_col_glob,b_col,info,fmt=afmt)
end if
call psb_geall(x_col,desc_a,info)
x_col(:) =0.0
call psb_geasb(x_col,desc_a,info)
call psb_geall(r_col,desc_a,info)
r_col(:) =0.0
call psb_geasb(r_col,desc_a,info)
t2 = psb_wtime() - t1
!!$ call psb_csprt(10+iam,a,head='% (A)')
call psb_sp_free(aux_a,info)
call psb_amx(ictxt, t2)
!!$ call psb_csprt(20+iam,a,head='% (A)')
!
! prepare the preconditioning matrix. note the availability
! of optional parameters
!
do pp=1, nprecs
mttot=1.d300
do nt=1,ntry
if (precs(pp)%lv2(1:2) == 'ml') then
if (precs(pp)%nlev < 2) then
write(0,*) 'Inconsistent number of levels ',precs(pp)%nlev,&
& ' forcing 2'
precs(pp)%nlev = 2
end if
nlev = precs(pp)%nlev
call mld_precinit(pre,precs(pp)%lv2,info,nlev=nlev)
! Defaults are OK for all intermediate levels. Only fix last level.
if (precs(pp)%omega>=0.0) then
call mld_precset(pre,aggr_damp_,precs(pp)%omega,info,ilev=nlev)
end if
call mld_precset(pre,ml_type_, precs(pp)%mltype, info,ilev=nlev)
call mld_precset(pre,aggr_alg_, precs(pp)%aggr, info,ilev=nlev)
call mld_precset(pre,coarse_mat_, precs(pp)%cmat, info,ilev=nlev)
call mld_precset(pre,smooth_pos_, precs(pp)%smthpos, info,ilev=nlev)
call mld_precset(pre,sub_solve_, precs(pp)%ftype2, info,ilev=nlev)
call mld_precset(pre,smooth_sweeps_, precs(pp)%jswp, info,ilev=nlev)
call mld_precset(pre,aggr_kind_, precs(pp)%smthkind,info,ilev=nlev)
else
call mld_precinit(pre,precs(pp)%lv1,info)
end if
call mld_precset(pre,n_ovr_, precs(pp)%novr,info ,ilev=1)
call mld_precset(pre,sub_restr_, precs(pp)%restr,info ,ilev=1)
call mld_precset(pre,sub_prol_, precs(pp)%prol,info ,ilev=1)
call mld_precset(pre,sub_solve_, precs(pp)%ftype1,info ,ilev=1)
! setting initial guess to zero
call psb_geaxpby(zzero,b_col,zzero,x_col,desc_a,info)
! building the preconditioner
call psb_barrier(ictxt)
t1 = psb_wtime()
call mld_precbld(a,desc_a,pre,info)
tprec = psb_wtime()-t1
if (info /= 0) then
write(0,*) 'INFO from precbld ',info
call psb_error()
goto 9999
end if
call psb_amx(ictxt,tprec)
!!$ call psb_csprt(40+iam,a,head='% (A)')
!!$ if (amroot) then
!!$ write(*,'("Matrix : ",a)') mtrx(nm)
!!$ write(*,'("RHS : ",a)') rhs(nm)
!!$ write(*,'("Method : ",a)') cmethd
!!$ write(*,'("Preconditioner : ",a)') precs(pp)%descr
!!$ call mld_prec_descr(6,pre)
!!$ end if
iparm = 0
call psb_barrier(ictxt)
t1 = psb_wtime()
call psb_krylov(cmethd,a,pre,b_col,x_col,eps,desc_a,info,&
& itmax,iter,err,itrace,irst=ml,istop=istopc)
call psb_barrier(ictxt)
t2 = psb_wtime() - t1
call psb_amx(ictxt,t2)
if (info/=0) then
write(0,*) 'INFO from solver ',info
call psb_errpush(4010,name,a_err='psb_SOLVER')
goto 9999
end if
!!$ write(0,*) iam,'Done Solver'
!!$ call flush(0)
!!$ call flush(6)
!!$ call psb_barrier(ictxt)
if(amroot.and.out2) &
& write(10,'(a20,2(1x,i3),1x,i5,3(1x,g9.4),1x,a)') &
& mtrx(nm),np,precs(pp)%novr,iter,tprec,t2,t2+tprec,&
& trim(precs(pp)%descr)
if(amroot) &
& write(0,'(a20,2(1x,i3),1x,i5,3(1x,g9.4),1x,a)') &
& mtrx(nm),np,precs(pp)%novr,iter,tprec,t2,t2+tprec,&
& trim(precs(pp)%descr)
if(nt.lt.ntry) call mld_precfree(pre,info)
if((t2+tprec).lt.mttot) then
mtslv=t2
mtprec=tprec
mttot=t2+tprec
end if
end do
!!$ call psb_csprt(50+iam,a,head='% (A)')
call psb_geaxpby(zone,b_col,zzero,r_col,desc_a,info)
call psb_spmm(-zone,a,x_col,zone,r_col,desc_a,info)
call psb_genrm2s(resmx,r_col,desc_a,info)
call psb_geamaxs(resmxp,r_col,desc_a,info)
if (amroot) then
write(*,'("Matrix : ",a)') mtrx(nm)
write(*,'("RHS : ",a)') rhs(nm)
write(*,'("Method : ",a)') cmethd
write(*,'("Preconditioner : ",a)') precs(pp)%descr
call mld_prec_descr(pre)
write(*,'("Computed solution on ",i4," processors")')np
write(*,'(" ")')
write(*,'("Iterations to convergence: ",i6)') iter
write(*,'("Error indicator on exit : ",g9.4)') err
write(*,'("Time to buil prec. : ",es10.4)')mtprec
write(*,'("Time to solve matrix : ",es10.4)')mtslv
write(*,'("Time per iteration : ",es10.4)')mtslv/(iter)
write(*,'("Total time : ",es10.4)')mttot
write(*,'("Residual norm 2 : ",es10.4)')resmx
write(*,'("Residual norm inf : ",es10.4)')resmxp
write(*,'(72("="))')
write(*,'(" ")')
write(*,'(" ")')
write(*,'(" ")')
if(out1) write(8,'(a20,2(1x,i3),1x,i5,5(1x,g9.4),1x,a)') mtrx(nm),&
& np,precs(pp)%novr,&
& iter,mtprec,mtslv,mttot,resmx,resmxp,trim(precs(pp)%descr)
end if
call mld_precfree(pre,info)
end do
call psb_gefree(b_col, desc_a,info)
call psb_gefree(x_col, desc_a,info)
call psb_spfree(a, desc_a,info)
call psb_cdfree(desc_a,info)
deallocate(r_col,stat=info)
deallocate(aux_b,stat=info)
if (ipart==0) then
deallocate(ivg,ipv,stat=info)
endif
end do
9999 continue
if(info /= 0) then
call psb_error(ictxt)
end if
call psb_exit(ictxt)
stop
end program zf_bench
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