mld2p4-2:

docs/html/img107.png docs/html/node12.html docs/html/node15.html docs/html/node16.html docs/html/node18.html docs/html/node20.html docs/html/node26.html docs/html/node3.html docs/html/node4.html docs/html/node5.html docs/html/node6.html docs/html/node8.html docs/mld2p4-2.1-guide.pdf Doc fixes.
9 years ago · 758164ff20
parent ed62c7d467
commit 758164ff20
13 changed files with 263 additions and 241 deletions
--- a/docs/html/img107.png
+++ b/docs/html/img107.png
--- a/docs/html/node12.html
+++ b/docs/html/node12.html
@ -726,7 +726,7 @@ $w = y_1$;
 \begin{tabbing}
 \quad \=\quad...
 ...= y_l+r_l$\\
-\textbf{endfor} \\ [1mm]
+\textbf{endfor}  [1mm]
 $w = y_1$;
 \end{tabbing}}
 \end{minipage}}">
--- a/docs/html/node15.html
+++ b/docs/html/node15.html
@ -163,10 +163,13 @@ preconditioner, which uses block Jacobi with ILU(0) on the
 local blocks as post-smoother, has a coarsest matrix replicated on the processors,
 and solves the coarsest-level system with the LU factorization from UMFPACK&nbsp;[<A
 HREF="node25.html#UMFPACK">9</A>].
-Figure&nbsp;<A HREF="#fig:ex_3lhm">4</A> shows how to set a three-level preconditioner similar to the one of&nbsp;<A HREF="#fig:ex_3lh">3</A>, but the coarsest-level systems is solved with the multifrontal factorization from MUMPS&nbsp;[<A
+Figure&nbsp;<A HREF="#fig:ex_3lhm">4</A> shows how to set a three-level preconditioner
- HREF="node25.html#UMFPACK">9</A>]. 
+similar to the one of&nbsp;<A HREF="#fig:ex_3lh">3</A>, but the coarsest-level
-Note that MUMPS can be used on both replicated and distributed coarsest level matrices, 
+systems is solved with the multifrontal factorization from
-as a global and local solver respectively.   
+MUMPS&nbsp;[<A
 HREF="node25.html#UMFPACK">9</A>].  
 Note that MUMPS can be used on both replicated and distributed
 coarsest level matrices,  as a global and local solver respectively.   
 The number of levels is specified by using <code>mld_precinit</code>; the other
 preconditioner parameters are set by calling <code>mld_precset</code>. Note that
 the type of multilevel framework (i.e. multiplicative among the levels
@ -183,13 +186,14 @@ solver. Again, <code>mld_precset</code> is used only to set
 non-default values of the parameters (see Tables&nbsp;<A HREF="#tab:p_type">2</A>-<A HREF="#tab:p_coarse">5</A>).
 In both cases, the construction and the application of the preconditioner
 are carried out as for the default multi-level preconditioner.
-The code fragments shown in in Figures&nbsp;<A HREF="#fig:ex_3lh">3</A>&nbsp;<A HREF="#fig:ex_3lhm">4</A>-<A HREF="#fig:ex_3la">5</A> are
+The code fragments shown in in
-included in the example program file <code>mld_dexample_ml.f90</code> too.
+Figures&nbsp;<A HREF="#fig:ex_3lh">3</A>&nbsp;<A HREF="#fig:ex_3lhm">4</A>-<A HREF="#fig:ex_3la">5</A> are
 included in the example program file <code>mld_dexample_ml.f90</code> too. 
 <P>
 Finally, Figure&nbsp;<A HREF="#fig:ex_1l">6</A> shows the setup of a one-level
-additive Schwarz preconditioner, i.e. RAS with overlap 2. The corresponding
+additive Schwarz preconditioner, i.e. RAS with overlap 2. The
-example program is available in <code>mld_dexample_</code> <code>1lev.f90</code>.
+corresponding example program is available in <code>mld_dexample_1lev.f90</code>. 
 <P>
 For all the previous preconditioners, example programs where the sparse matrix and
--- a/docs/html/node16.html
+++ b/docs/html/node16.html
@ -57,10 +57,11 @@ User Interface
 </H1>
 <P>
-The basic user interface of MLD2P4 consists of six routines. The four routines <code>mld_</code> <code>precinit</code>,
+The basic user interface of MLD2P4 consists of six routines. The four
-<code>mld_precset</code>, <code>mld_precbld</code> and <code>mld_precaply</code> encapsulate all the functionalities
+routines <code>mld_</code> <code>precinit</code>, <code>mld_precset</code>,
-for the setup and the application of any one-level and multi-level
+<code>mld_precbld</code> and <code>mld_precaply</code> encapsulate all the
-preconditioner implemented in the package.
+functionalities for the setup and the application of any one-level and
 multi-level preconditioner implemented in the package. 
 The routine <code>mld_precfree</code> deallocates the preconditioner data structure, while
 <code>mld_precdescr</code> prints a description of the preconditioner setup by the user.
--- a/docs/html/node18.html
+++ b/docs/html/node18.html
@ -71,7 +71,7 @@ contained in <code>val</code>.
 The routine may also be invoked as a method
 of the preconditioner object as in the following:
 <DIV ALIGN="CENTER">
-<code>call p%set(what,val,info [,ilev])</code>
+<code>call p%set(what,val,info [,ilev, pos])</code>
 <BR>
 </DIV>
 In this case it is also possible to specify an optional <code>ilev</code>
@ -84,8 +84,8 @@ solver by extending one of the base MLD2P4 types, and has declared a
 variable of the new  type in the main program, it is possible to pass
 the new smoother/solver variable  to the setup routine as follows:
 <DIV ALIGN="CENTER">
-<code>call p%set(smoother,info [,ilev])</code>
+<code>call p%set(smoother,info [,ilev ,pos])</code>
-<BR><code>call p%set(solver,info [,ilev])</code>
+<BR><code>call p%set(solver,info [,ilev ,poss])</code>
 </DIV>
 In this way, the variable will act as a <I>mold</I> to which the
@ -202,7 +202,7 @@ according to their needs.
 <P>
 <BR><P></P>
-<DIV ALIGN="CENTER"><A NAME="1302"></A>
+<DIV ALIGN="CENTER"><A NAME="1306"></A>
 <TABLE>
 <CAPTION><STRONG>Table 2:</STRONG>
 Parameters defining the type of multi-level preconditioner.
@ -246,7 +246,7 @@ Parameters defining the type of multi-level preconditioner.
 <P>
 <BR><P></P>
-<DIV ALIGN="CENTER"><A NAME="1304"></A>
+<DIV ALIGN="CENTER"><A NAME="1308"></A>
 <TABLE>
 <CAPTION><STRONG>Table 3:</STRONG>
 Parameters defining the one-level preconditioner used as smoother.
@ -288,13 +288,17 @@ Parameters defining the one-level preconditioner used as smoother.
 <TR><TD ALIGN="LEFT" VALIGN="TOP" WIDTH=99><code>mld_sub_solve_</code> <BR><code>SUB_SOLVE</code></TD>
 <TD ALIGN="LEFT"><code>character(len=*)</code></TD>
 <TD ALIGN="LEFT" VALIGN="TOP" WIDTH=91><TT>'DIAG'</TT>  
-                           <TT>'GS'</TT>  
+                           <TT>'GS'</TT>   <TT>'BWGS'</TT>  
                           <TT>'ILU'</TT>   
                           <TT>'MILU'</TT>   <TT>'ILUT'</TT> 
-                             <TT>'UMF'</TT>   <TT>'SLU'</TT></TD>
+                            
                           <TT>'UMF'</TT>  
                           <TT>'SLU'</TT>
                             <TT>'MUMPS'</TT></TD>
 <TD ALIGN="LEFT"><TT>'ILU'</TT></TD>
 <TD ALIGN="LEFT" VALIGN="TOP" WIDTH=142>Predefined local solver: pointwise Jacobi
                           (diagonal scaling),
                           (forward) Gauss-Seidel, Backward
                           Gauss-Seidel, ILU(<IMG
 WIDTH="13" HEIGHT="31" ALIGN="MIDDLE" BORDER="0"
 SRC="img35.png"
@ -305,8 +309,8 @@ Parameters defining the one-level preconditioner used as smoother.
                           ILU(<IMG
 WIDTH="27" HEIGHT="31" ALIGN="MIDDLE" BORDER="0"
 SRC="img36.png"
- ALT="$p,t$">), LU from UMFPACK, LU  from
+ ALT="$p,t$">), LU from UMFPACK, LU  from 
-                           SuperLU (plus triangular solve).</TD>
+                           SuperLU (plus triangular solve), LU from MUMPS.</TD>
 </TR>
 <TR><TD ALIGN="LEFT" VALIGN="TOP" WIDTH=99><code>mld_sub_fillin_</code> <BR><code>SUB_FILLIN</code></TD>
 <TD ALIGN="LEFT"><code>integer</code></TD>
@ -362,7 +366,7 @@ Parameters defining the one-level preconditioner used as smoother.
 <P>
 <BR><P></P>
-<DIV ALIGN="CENTER"><A NAME="1306"></A>
+<DIV ALIGN="CENTER"><A NAME="1310"></A>
 <TABLE>
 <CAPTION><STRONG>Table 4:</STRONG>
 Parameters defining the aggregation algorithm.
@ -397,7 +401,7 @@ Parameters defining the aggregation algorithm.
 </TR>
 <TR><TD ALIGN="LEFT" VALIGN="TOP" WIDTH=142><code>mld_aggr_ord_</code>  <BR><code>AGGR_ORD</code></TD>
 <TD ALIGN="LEFT"><code>character(len=*)</code></TD>
-<TD ALIGN="LEFT" VALIGN="TOP" WIDTH=68><TT>'NAT'</TT></TD>
+<TD ALIGN="LEFT" VALIGN="TOP" WIDTH=68><TT>'NATURAL'</TT></TD>
 <TD ALIGN="LEFT" VALIGN="TOP" WIDTH=68><TT>'DEGREE'</TT></TD>
 <TD ALIGN="LEFT" VALIGN="TOP" WIDTH=170>Initial ordering of indices for aggregation
                            algorithm: natural ordering or sorted by
@ -503,7 +507,7 @@ Parameters defining the aggregation algorithm.
 <P>
 <BR><P></P>
-<DIV ALIGN="CENTER"><A NAME="1309"></A>
+<DIV ALIGN="CENTER"><A NAME="1313"></A>
 <TABLE>
 <CAPTION><STRONG>Table 5:</STRONG>
 Parameters defining the coarse-space correction at the coarsest
--- a/docs/html/node20.html
+++ b/docs/html/node20.html
@ -70,7 +70,7 @@ This routine computes <!-- MATH
 <IMG
 WIDTH="118" HEIGHT="39" ALIGN="MIDDLE" BORDER="0"
 SRC="img100.png"
- ALT="$y = op(M^{-1})\, x$">, where <IMG
+ ALT="$y = op(M^{-1})  x$">, where <IMG
 WIDTH="23" HEIGHT="15" ALIGN="BOTTOM" BORDER="0"
 SRC="img60.png"
 ALT="$M$"> is a previously built
--- a/docs/html/node26.html
+++ b/docs/html/node26.html
@ -63,7 +63,7 @@ Mathematics Department, Macquarie University, Sydney.
 The command line arguments were: <BR>
 <STRONG>latex2html</STRONG> <TT>-local_icons -noaddress -dir ../../html userhtml.tex</TT>
 <P>
-The translation was initiated by Salvatore Filippone on 2016-05-09
+The translation was initiated by Salvatore Filippone on 2016-05-18
 <BR><HR>
 </BODY>
--- a/docs/html/node3.html
+++ b/docs/html/node3.html
@ -103,7 +103,7 @@ as algebraic coarsening strategy&nbsp;[<A
 </UL>
 <P>
-Version 2.0 of the package is written in <I>Fortran&nbsp;2003</I>, following an
+Version 2.1 of the package is written in <I>Fortran&nbsp;2003</I>, following an
 <I>object-oriented design</I> through the exploitation of features
 such as abstract data type creation, functional overloading and
 dynamic memory management. The parallel implementation is based on a Single Program Multiple Data
@ -149,11 +149,12 @@ by expert users to build new versions of multi-level Schwarz preconditioners.
 We provide here a description of the upper-layer routines, but not of the
 medium-layer ones.
 <P>
-The user interface of version 2.0 is essentially identical to that of
+The user interface of version 2.1 is essentially identical (except for
 the support of additional solvers) to that of
 version 1.1.  The internal implementation however has been changed
 significantly; as a result, it has become much easier to extend the library by
 adding new smoothers and/or solvers, thanks to the Fortran&nbsp;2003 features
-exploited in the design of PSBLAS&nbsp;3.0. 
+exploited in the design of PSBLAS&nbsp;3. 
 <P>
 This guide is organized as follows. General information on the distribution of the source code
--- a/docs/html/node4.html
+++ b/docs/html/node4.html
@ -89,7 +89,7 @@ constant
 </DIV>
 <BR CLEAR="ALL">
 <P></P>
-whose current value is <code>2.0.0</code>
+whose current value is <code>2.1.0</code>
 <BR><HR>
 </BODY>
--- a/docs/html/node5.html
+++ b/docs/html/node5.html
@ -66,11 +66,10 @@ to build the software.
 MLD2P4 is implemented almost entirely in Fortran&nbsp;2003, with some
 interfaces to external libraries in C; the Fortran compiler
 must support the Fortran&nbsp;2003 standard plus the extension <code>MOLD=</code>
-feature, which
+feature, which enhances the usability of <code>ALLOCATE</code>. 
 enhances the usability of <code>ALLOCATE</code>. 
 Many compiles do this; in particular, this is
 supported by the GNU Fortran compiler, for which we 
-recommend to use at least version 4.7.2. 
+recommend to use at least version 4.8. 
 The software defines data types and interfaces for
 real and complex data, in both single and double precision. 
--- a/docs/html/node6.html
+++ b/docs/html/node6.html
@ -88,7 +88,7 @@ The following base libraries are needed:
 HREF="node25.html#psblas_00">18</A>] Parallel Sparse BLAS is
  available from 
 <BR><code>http://www.ce.uniroma2.it/psblas</code>; version
-  3.3   (or later) is required. Indeed, all the prerequisites
+  3.4.0  (or later) is required. Indeed, all the prerequisites
  listed so far are also prerequisites of PSBLAS.
 </DD>
 </DL>
--- a/docs/html/node8.html
+++ b/docs/html/node8.html
@ -144,6 +144,15 @@ Optional Packages:
  --with-extra-libs       List additional link flags here. For example,
                          --with-extra-libs=-lspecial_system_lib or
                          --with-extra-libs=-L/path/to/libs
  --with-mumps=LIBNAME    Specify the libname for MUMPS. Default: "-lsmumps
                          -ldmumps -lcmumps -lzmumps -lmumps_common -lpord"
  --with-mumpsdir=DIR     Specify the directory for MUMPS library and
                          includes. Note: you will need to add auxiliary
                          libraries with --extra-libs; this depends on how
                          MUMPS was configured and installed, at a minimum you
                          will need SCALAPACK and BLAS
  --with-mumpsincdir=DIR  Specify the directory for MUMPS includes.
  --with-mumpslibdir=DIR  Specify the directory for MUMPS library.
  --with-umfpack=LIBNAME  Specify the library name for UMFPACK and its support
                          libraries. Default: "-lumfpack -lamd"
  --with-umfpackdir=DIR   Specify the directory for UMFPACK library and
@ -194,12 +203,12 @@ it to find libraries and programs with nonstandard names/locations.
 Report bugs to &lt;bugreport@mld2p4.it&gt;.
 </PRE>
-For instance, if a user has built and installed PSBLAS 3.3 under the
+For instance, if a user has built and installed PSBLAS 3.4 under the
 <code>/opt</code> directory and is
 using the SuiteSparse package (which includes UMFPACK), then MLD2P4
 might be configured with:
 <PRE>
- ./configure --with-psblas=/opt/psblas-3.3/ \
+ ./configure --with-psblas=/opt/psblas-3.4/ \
 --with-umfpackincdir=/usr/include/suitesparse
 </PRE>
 Once the configure script has completed execution, it will have
@ -208,8 +217,13 @@ Makefiles in the directory tree; this file will be copied in the
 install directory under the name <code>Make.inc.MLD2P4</code>.
 <P>
-In order to use the MUMPS solver based on multifrontal factorization, the user has to add MUMPS flags, include directories and libraries in the Make.inc file.
+To use the MUMPS solver package, 
-The necessary MUMPS libraries are <code>-ldmumps, -lsmumps -lzmumps -lzmumps -mumps_common -lpord</code>. The flag <code>-DHAVE_MUMPS_</code> is mandatory too. Since MUMPS uses openmp and ScaLAPACK, <code>LINKOPT=-fonemp</code> must be added as well, along with the ScaLAPACK flags, include directories and library (which can be set using the configure script).
+the user has to add the appropriate options to the configure script;
 by default we are looking for the libraries
 <code>-ldmumps -lsmumps -lzmumps -lzmumps -mumps_common -lpord</code>.
 MUMPS often uses additional packages such as ScaLAPACK, ParMETIS,
 SCOTCH, as well as enabling OpenMP; in such cases it is necessary to
 add linker options with the <code>--with-extra-libs</code> configure option.
 <P>
 To build the library the user will now enter 
--- a/docs/mld2p4-2.1-guide.pdf
+++ b/docs/mld2p4-2.1-guide.pdf
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